4U63,1DNP,1OWL,2E0I,6KII,1NP7


Conserved Protein Domain Family
PhrB

?
COG0415: PhrB 
Click on image for an interactive view with Cn3D
Deoxyribodipyrimidine photolyase [Replication, recombination and repair]
Statistics
?
PSSM-Id: 440184
Aligned: 561 rows
Threshold Bit Score: 349.424
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
?
Program:
Drawing:
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
4U63_A        24 TAPVIVWFRKDLRLSDNLALLAAVEHGGPVIPVYI---REkSAg--pLGGAQEWWLHHSLAALSSSLEKAGGRLVLASGD 98 
WP_013330714   6 FSLSAHIFTRDLRIDDNPPLLSALASSESVITFFAaekNLaTEnp-aLCENRLAFLSESLSDLSGAIAEKGGEIRFYDEG 84 
WP_013818371   5 FAKSLFIFRRDLRLYDNSGLNAALQQSEQVLACFIfdpRQiEPha-yQSQPGLQFMLEALQDLQQQFRTHQWQLGLYQGQ 83 
WP_088618788   4 YNTALFLFRRDLRLSDNTALNAALQSAQQVIAGFVfdeRQiNPhp-yQSQPALQFMRQSLADLAGQLQAVNANLALFQGL 82 
WP_014146885   4 YKKSLYIVRRDMRIDDNTALNEALRLSEQVQACFIfdpYQiDEhp-yQSRPALQFMLQSLDDLREQFRERGACLTIVRGE 82 
WP_086907698   2 YEKSIFLFHRDLRLEDNVGLLESLQNSKEVIPCFIydsNLiKKl--kDAKFRWNFLNESLLDLDKELQKKGSRLQILEGT 79 
WP_012208819  15 YKIGLHIFRRDLRLEDNTSLIEALQSCERVIPAFIfddRQiKDnd-yKSDNAVQFMIACLKELNDQLHQLNARLYFFEGL 93 
WP_048188711   3 FGVSVFVFTRDLRIEDNVGLVSACASSDVVIPCFVlnpKIqD-------SYRFRFLLDCIEDLKNEFTKRKAALHVLYGN 75 
WP_052433794   3 YKKSLFVFRRDYRLDDNTSLIQACENSEQVIPCFLfekNLiDKnnpvFGKMRIRFMIDSLKDLFEQAKGKNCEILIKNDS 82 
WP_015324052   2 YHKVLFIFRRDLRIDDNTGLIEALHSSHTVLPCFIfdpRLlEDg--kYSKNALQFMLGSIKDLEAQLNALGGRLYLFSGL 79 
4U63_A        99 AERILRDLISETGADTVVWNRRYDPTGMATDKALKQKLRDDGLTVRSFSGQLLHEPSRLQTKSGGPYRVYTPFWRALEGS 178
WP_013330714  85 ALKLAEKLCRT-GVEAVYMTRDYTPYAIKRENSLKKTCNDAGCSFFPVPGALLNEPEDVRKSDGEPYKVFTPFYRNASLI 163
WP_013818371  84 PEQLVSRLHREQAFEAIFVNRDYTPFGRRRDADLQTFCRKQGLAFYSCADTLLNEPEHGLKSDGSAYQVFTAFYNRARLH 163
WP_088618788  83 PVQVIRDLHQQHAIQAVFINRDYSPFSRQRDAEIADVCRQLNIALHSLPDALLTEPEQALKHDGSAYKVFTAFYHHVQKR 162
WP_014146885  83 PEKIVKDWVLACGIEAVFVNRDYTPFSRHRDYRLQQVCIELDIAWHSCADVLLNEPEQALKSDGSVYKVFTAFYNNARRI 162
WP_086907698  80 PEKSIEKIIKKHRIKSIFSNTDFSNYSQKRDEKIFQVCKKNEIPFHSTLDFLLHNPHDVKTNDDSPYTIYSFFYKKAKIF 159
WP_012208819  94 TAKVVESLIKTLGIEAVFVNKDYTPFSKKRDNEIKAICERERVDFKEHFDVLLHEPTEVLKDNGMPYIKFTDFLKKSKKI 173
WP_048188711  76 YTQALQQISKMQKIDAVFANQDYTPFAKKRQDQITYFCTTNNIPFHQYVDHLMYDPNMIKTQEGKPYSVFSQFFRTAIQI 155
WP_052433794  83 VSSLITSSVKQDEINAIFMNRDNSPYGRFRDNQFKSASEKNNIAFESYGDLLLRDAGSVLKQNDTPFLVFTPFYRAASQF 162
WP_015324052  80 PHEVTAKLIGEENIDAVIVNHDYTPFSVHRDGAISAVCAEHGSEFHQFHDATLQVPGSVKTQQGKMYQVFTQFFRAASKL 159
4U63_A       179 DephapADPPKSLt--AP-Kv-Wp---KSE---KLsNwk-lLPtKPdwakdFSDIWTPGETGALDKLDDFidGALKGYEE 247
WP_013330714 164 P-----VHEPETCtfqNF-SreElfdgASHdipfg----ksgteEA-----KNRAFSGGRSEGLRLLGET--GRLKNYED 226
WP_013818371 164 P-----VALPQGLadgQLlDg-Eq---NSD---LIsRl-----qQD-----HSNALPGGRQAALQQLDQL--TACRDYSQ 219
WP_088618788 163 P-----VPAPQALvngRFlSv-A----STAppdSLta------vGN-----WGG--QGGRTAGLARLAQL--QHCTDYAL 217
WP_014146885 163 P-----VGLPQTLaegRFcVp-P----ECPlydYEpl------kTN-----AGPNLRGGRRQALAIFDAL--ENLKEYQN 219
WP_086907698 160 P-----VRKIIKNsnkNYsKe-Ni---SNN---SIkDv------EN-----LDSEIKGGRKEGLKILKNL--EKFRDYDK 214
WP_012208819 174 D-----VREPQKNkfkNYfTe-Ei--------sSSiAlqvdkfpQN-----ENLILKGGRKEGLSYIERI--VKLKNYSE 232
WP_048188711 156 P-----VAKPQQNeftNFhAr-Li---DDYfa-----------sSD-----HTIPIKGGRKSALQILKSI--KNFADYEA 208
WP_052433794 163 K-----VRTPQVFnhkNLiTs-Nq---NSDd--TIsRlekiIP--------KTTVIEGGRKNGLKILENF--DKIADYNV 221
WP_015324052 160 Q-----VEVPVPVkkgAFfNs-Dv----SGaleIIpEfd----hNN-----QELFVHGGRSNALEVLSDL--SGFMDYDR 218
4U63_A       248 GRDFPAKPATSLLSPHLAAGEISPAAVWHATKGLsrhiasnD-ISRFRKEIVWREFCYHLLFHFPELGEKNWNDSFDAFS 326
WP_013330714 227 ERDFPAKACTSMLSAHLRFGTVSVREICRRISDTl------GpGHGLIRQLYWRDFFTHIAYHYPHVFKGPFQKRFESLH 300
WP_013818371 220 QRDFPALAATSNLSAYLKFGCCSVRETYYAVVESl------GtEHPLLRQLYWRDFFTQIAFHFPRVFGHAFHERYDKIV 293
WP_088618788 218 ERDFPALAATSQLSAHLKFGTLSVREAFAAITRQl------GaEHPLLRQLYWRDFMTHIAYHYPAVFGHAFIGKFDGLV 291
WP_014146885 220 RRDYPALASTSLLSAHLKFGTVSIREAFYVVQCVl------GdGHPLLRQFYWRDFFTHIAYHFPEVFGHAFVRKYDALP 293
WP_086907698 215 VRDFPGLNQTTLLSAHNKFGTMSIREIYTQIKEIl------GvNHTIMGEIYWREFFNYILFHFPHVEKKSFKQKFQDIP 288
WP_012208819 233 TRNTPSIDGTTKLSPHLKFGTVSVREVYGKVNENf------GnEHEIITQLHWRDFFTHILYHFPHVLGNSFKEKYNQIQ 306
WP_048188711 209 KRNYPMYQ-TTMLSAHSRFGTVSVRELYHTISENl------GmHHTLVNEIHWKEFFSHVLYHFPHVTKGAFRKNLSVTP 281
WP_052433794 222 QRNIPS-KPTSQLSTHNRFGTVSIREVHIAASKFf------GnDHSFISELYWRDFFSHLMFHFPYSQKKEFQEKYQGLK 294
WP_015324052 219 LRNIPSRMGTTGLSAHNRFGTVSIREVYHSFMDEl------GpDHTLISELYWRDFFIQLAAGHPRVFGRAFREKFDGLQ 292
4U63_A       327 WRDDEKSFKAWTRGMTGYPIVDAGMRQLWQHGTMHNRVRMIVASFLIKHLLIDWRKGEKWFRDTLVDADPASNAANWQWV 406
WP_013330714 301 WTDSKELFDKWCKGMTGFPIIDAGMRELNDTGYMHNRERLAAASFLVKDLHIDWRSGERYFASKLTDYDPSVNNGNWQWS 380
WP_013818371 294 WRNDREEFQAWTEGRTGVPIVDAGMRQLNQTGAMHNRVRMIVASFLVKDLHIDWRWGERYFARHLLDYDPCVNNGNWQWA 373
WP_088618788 292 WDNNRAYFQAWTEGRTGFPIVDAGMRELNATGFMHNRVRMITASFLIKDLRISWRWGERYFAQHLTDYDPCVNNGNWQWA 371
WP_014146885 294 WRNDQAQFYAWAEGRTGFPIVDAGMRELNRTGYMHNRVRMITASFLVKDLHISWRWGERYFAQHLVDYDPCVNNGNWQWA 373
WP_086907698 289 WENSEKLFKKWKEGETGFPIVDAGMRQLNNTGFMHNRVRMVVASFLTKDLHIDWRWGERYFARKLIDYDPAVNSGNWQWA 368
WP_012208819 307 WENDVDKFKAWCTGRTGYPIVDAGMRQLNLTGWMHNRVRMITGSFLVKDLHIDWRWGEKYFAQRLVDYDPAINNGNWQWV 386
WP_048188711 282 CKHNKAHIDAWKNGRTGFPIVDAGMRELNNTGFMHNRIRMIVASFLSKDLHADWKIGERYFAEKLIDYDLAVNNGNWQWA 361
WP_052433794 295 WSHDKKKFEKWVNGLTGFPIVDAGMRELKQTGFMHNRCRMIVASFLTKDLQCDWRLGERHFAKYLIDYDPCVNAGSWQWS 374
WP_015324052 293 WDNDPVRFQAWCEGSTGFPIVDAGMRQLATTGYMHNRVRMIVASFLVKDLHIDWRWGERYFARKLVDYDPCVNNGNWQWA 372
4U63_A       407 AGSGADASPFFRIFNPILQGEKFDGDGDYVRRFVPELEKlerkyihkpfeapkdalkkagvelgktyplPIVDHGKARER 486
WP_013330714 381 ASTGCDAQPYFRIFNPWLQQKKFDPDCIYIRRWVPELSDlepkeihnldk--------tgsvppagypnPIVDHKNEARA 452
WP_013818371 374 ASTGCDAQPYFRIFNPWLQQKKFDPDCVYIKHWVPELNNytpalihdwl----------kqplagdyppPIVEHGLRSQQ 443
WP_088618788 372 ASTGCDAQPYFRIFNPWLQQQKFDPQGDYIYRWLPELRSvpiktlhqwp----------qkhygdfypaPIVDHSTEVQI 441
WP_014146885 374 ASTGCDAQPYFRIFNPWLQQQKFDGDCEYIYRWIPELRPfapsiihtwd----------kkfaacdypkPIVDHRLESEK 443
WP_086907698 369 ASTGCDAVPYFRIFNPWRQQERFDLDCKYIKKWILELNEiepkiihnlwn---------kfpdglkypkPMIEHKIEAEK 439
WP_012208819 387 ASTGCDAQPFFRIFNPILQQQKFDPECNYIKTWLPELTNlnleqihtln-----------ipkdidyptPIVDHKVASEK 455
WP_048188711 362 ASTGCDAQPWFRVFNPWLQQKKFDSECRYIKKWIPELEKlsaekihrle----------sesfdvdyprPIVDHAEESKI 431
WP_052433794 375 ASTGCDAQPYFRVFNPWLQQKKFDPECVYIKKWIPELVNlttkqihdiet--------tpldssidyprPMVIHKEESAR 446
WP_015324052 373 ASTGADATPYFRIFNPWLQQQKFDPECEYIKKWVPELRNmssqdihalek--------hippqgigyppVIVDHKAEKDK 444
4U63_A       487 ALAAYAAvK 495
WP_013330714 453 AKIIYSGaA 461
WP_013818371 444 AKVLFQQaG 452
WP_088618788 442 TKARFKAaG 450
WP_014146885 444 AKEMFRMcT 452
WP_086907698 440 TKNIFKSq- 447
WP_012208819 456 AKKLYKI-- 462
WP_048188711 432 AKQMFRQeT 440
WP_052433794 447 SKLMFKVv- 454
WP_015324052 445 TLIMFRSv- 452
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap