1B8K,1B8M


Conserved Protein Domain Family
NGF

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pfam00243: NGF (this model, PSSM-Id:395186 is obsolete and has been replaced by 459728)
Nerve growth factor family
Statistics
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PSSM-Id: 395186
Aligned: 22 rows
Threshold Bit Score: 151.713
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1B8K_A         6 SHRGEYSVCDSESLWVTDKSSAIDIRGHQVTVLGEIKT---GNSp-VKQYFYETRCK----------------------E 59 
7_pfamImport   1 MHRGEVSVCDSINTWVGNLTRAIDMAGNEVTVLPFVTI---NNVv-KKQFFYETTCHspthggsgaasagrpggrgrkqG 76 
EEN55974      39 hagQEVSVCDEKQEYKHISEPLNDYKNREVEVLQSFITpdlNKGevINQFFAVTTCNd---------------------- 96  Florida lancelet
P13600       128 FHRGEFSVCDSISVWVGDKTTATDIKGKEVMVLGEVNI---NNSv-FKQYFFETKCR----------------------D 181 cattle
XP_015197626 121 LRRGEYSVCKSISTWVGNKTKATDIKGQEVSVLAEFNI---NNVv-KKQYFFETTCA----------------------G 174 spotted gar
P34129        82 QHRGVYSVCESVSVWVGNKTKATDISGKEVTVLPYVNI---NNVk-KKQYFFETTCH----------------------S 135 southern platyfish
XP_007234674 102 LHRGEYSVCDSENRWVGNLTRATDVAGNEVTVLPDVRI---NEVv-KKQFFYETTCRvnkvsga--------prgrgasG 169 Mexican tetra
XP_010587898 129 FHRGEFSVCDSVSMWVGDKTTATDIKGKEVMVLKEVII---NNVv-YKQYFFETKCQ----------------------N 182 African savanna...
XP_009298321 131 SYRGEFSVCDSESNWVTNRTSAVDSRGNHVTVLNSFTV---KQK--YTQYFYETKCK----------------------T 183 zebrafish
TNM87037     147 MHRGEYSVCESINTWVGNLTQATDISENEVMVLPNVTI---NNVv-KKQFFYETTCRs---------------------P 201 Takifugu bimacu...
1B8K_A        60 ARPV---------------------KNGCRGIDDKHWNSQCKTSQTYVRALTSENNKlVGWRWIRIDTSCVCALSRKIG 117
7_pfamImport  77 NRSG---------------------SSGCRGIDSGHWNSYCTNTHIFVRAMTIFKEM-IAWRFIRINAACECVLSRKSY 133
EEN55974      97 -SRGs--------------------EGGCRGIDKAHWTSSCVTKKSNVPAIVRIGGK-LEYTFIAINTSCNCALKKKpr 153 Florida lancelet
P13600       182 PNPV---------------------DSGCRGIDAKHWNSYCTTTHTFVKALTMDGKQ-AAWRFIRIDTACVCVLSRKTG 238 cattle
XP_015197626 175 NDSG---------------------SSGCLGIDSRRWNSYCTNTHTFVRALTVDKKL-VAWRYIRINTACVCVLSRKSW 231 spotted gar
P34129       136 PPSG---------------------GSRCLGIDARHWNSHCTNSHTFVRALTSSENQ-VAWRLIRINVACVCVLSRKSW 192 southern platyfish
XP_007234674 170 LKAG---------------------TSGCRGIDNKHWNSYCTNTHTYVRALTSFKNQ-IAWRLIRINAACVCVLSRKSW 226 Mexican tetra
XP_010587898 183 PNPV---------------------DNGCRGIDSKHWNSYCAPNYSFTRALTLDDRQ-TAWRFIRINTACVCVISRKTG 239 African savanna ...
XP_009298321 184 PHSHr--------------------KSRCLGIDEKHWNSQCKTTQTYVRALTQHKSL-VSWNWIRIDTACVCALSKKHR 241 zebrafish
TNM87037     202 THRGpgtanggkpggrsgkqatkagNSGCLGIDSRHWNSYCTNTHIYVSALTLYQKR-TAWRYIRINAACVCVLSRKSW 279 Takifugu bimacul...
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