Conserved Protein Domain Family
CCDC117

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pfam15810: CCDC117 (this model, PSSM-Id:406291 is obsolete and has been replaced by 434955)
Coiled-coil domain-containing protein 117
CCDC117 is a family of coiled-coil proteins found in eukaryotes. Proteins in this family are typically between 203 and 279 amino acids in length. There is a conserved MELV sequence motif. The function is not known.
Statistics
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PSSM-Id: 406291
Aligned: 10 rows
Threshold Bit Score: 156.106
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_005990310 200 CEMARRQLQEIENRITVEDED---PVESD-CFSNGPVLVMSDILKEELKKGFDDRITHEVVESLTRPCMELAVWKPTQIK 275 coelacanth
3_pfamImport   2 VEAAQRKLQEIEDRITLEDDDedeDLDLE-PAPRRPVLVMSDSLKEGLQRGIGDILPHTVAQSVSHSCMELVLWRPPDDP 80 
NP_001116751 142 VEAAQRRLQEIEERITLEDDSdeeELDVE-PAQRRPVLVMSDSLREGLQRGIGDILPHMVAQSVSRSCMELVVWRPPEDP 220 zebrafish
XP_014324452 114 IEAAHRKLQEIEDRIILEDDDe--DLDVE-PVPRRPVLVISDSLKEGLQRGISDILPQTVAQSVSPSGMELVLWRPPEDP 190 southern platyfish
XP_003451760 107 IEAAQRKLQEIEDRITLEDDEd-eDLDVE-PAPRRPVLVMSDSLKKGLQQGISDILPHTVAQSVSRSCMELVLWRPPEDP 184 Nile tilapia
XP_007665715  10 CEVARRKLQEIEERLIDEDEE----VEADrSVSNLPTLIMSDALKTGLKRELDEVLTKKIIESMNRPSMELVLWKPLPEI 85  platypus
XP_001380070 136 CEAARRKLQEIEDRIIDEDEE----VEADrRISDLPSLVLSDTLKTGLKRGFDEVLTKKIIESMSRPSMELVLWKPLPEL 211 gray short-tail...
XP_001172845 142 CEVARRKLQEIEDRIIDEDEE----VEADrNVNHLPSLVLSDTMKTGLKREFDEVFTKKMIESMSRPSMELVLWKPLPEI 217 chimpanzee
XP_015221493   6 rvAAVQRLQEIEDRITLEDDDe-dDLETE-SADRKPVLVISDSLREGLQRGIADIIPKKVVESMNHLCMELVLWRPPPEV 83  spotted gar
XP_002194727 180 CEVARRKLQEIEDRIIDEDEE----VHADgSVSNLPTLILSDTLKKGMKRDFGEVLTKKIIESMSRPSMELVLWKPLPEF 255 zebra finch
XP_005990310 276 YPDKLKEMAEKsKLEKE----QSREVAVAGLTf-ENCGTQSNYRWNELISAIYNDQSTTGDAEEEMEL 338 coelacanth
3_pfamImport  81 FCRRRKFTVQR-QRKQQia-sQQPPTPCSSPT--PPSAHSSSSAPADAHSSLYVFPVAHCSGEEDMEM 144
NP_001116751 221 LTQRLKDSLQRqQRKS-----RQTPTPVPSVS--------SPPSHQQTFSPLFS-----NSGEEDMEL 270 zebrafish
XP_014324452 191 FCQRLKDSLQK-QRKQQtv-gRQHPTPCSSPS----PPLSPSCPPAETCAPMYSFPVLHHSGEEDMEI 252 southern platyfish
XP_003451760 185 FSQRLKDSLQK-QRKQQta-cRQTPTPCPSPS--PHSPLNPSSPPADTHSPLYSFSVAHNSGEEEMEM 248 Nile tilapia
XP_007665715  86 LSDKPKRLSGVkNFPQEtr-kGRAKPGVAGANfhQRNELFSEARPAEI--PLYNSLEPAGCTEEEMEL 150 platypus
XP_001380070 212 LPDKPKPLPCVkNYTEEpg-gDQSKPPRAANTfcQQTEVFSEPHQIGV--PLYSVLDTTGCTEEEMEL 276 gray short-tailed opossum
XP_001172845 218 LSDKPKPSSNTkNYIGE----SQAKHAAAGTAfpQRTELFLEPRQTGM--SLYNSLETAASTEEEMEL 279 chimpanzee
XP_015221493  84 LPRRLKDSM---QRVQQla-aSSSKEPLLVKN------TDTEAQQHRSCSMLYTGPGSQAGMEEDVEM 141 spotted gar
XP_002194727 256 MTDKLKSVS-VkNFKQQstevCQAKQPIPRAPfdPQTETFPGSQQTAMSPDPYASLGISGCAEEEMEL 322 zebra finch
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