Conserved Protein Domain Family
MFS_SLC22A16_CT2

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cd17375: MFS_SLC22A16_CT2 
Solute carrier family 22 member 16 (also called Carnitine transporter 2) of the Major Facilitator Superfamily of transporters
Solute carrier family 22 member 16 (SLC22A16) is also called carnitine transporter 2 (CT2), fly-like putative transporter 2 (FLIPT2), organic cation transporter OKB1, or organic cation/carnitine transporter 6 (OCT6). It is a partially sodium-ion dependent high affinity carnitine transporter. It also transports organic cations such as tetraethylammonium (TEA) and doxorubicin. It is one of several organic cation transporters (OCTs) that falls into the SLC22 (solute carrier 22) family. OCTs are broad-specificity transporters that play a critical role in the excretion and distribution of endogeneous organic cations and for the uptake, elimination and distribution of cationic drugs, toxins, and environmental waste products. SLC22A16 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.
Statistics
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PSSM-Id: 340933
Aligned: 7 rows
Threshold Bit Score: 546.656
Created: 30-Jan-2017
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
putative
Feature 1:putative chemical substrate binding pocket [chemical binding site]
Evidence:
  • Comment:based on the structures of MFS transporters with bound substrates, substrate analogs, and/or inhibitors
  • Comment:since MFS proteins facilitate the transport of many different substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides, the residues involved in substrate binding may not be strictly conserved among superfamily members
  • Comment:the substrate binding site or translocation pore has access to both sides of the membrane in an alternating fashion through a conformational change of the MFS transporter

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                           ##  ##  #                       #                            
Q86VW1       118 GSKKEFPCVDGYIYDQNTWKSTAVTQWNLVCDrkwlAMLIQPLFMFGVLLGSVTFGYFSDrlgRRVVLWATSSSMFLFGI 197 human
Q66KG0       111 GNKTLFSCSNGYHYDKSNLESSIVTEWDLVCDrewlAKLIQPIFMLGVLIGAVIFGDIADrvgRRPIIWITSTGQFLFGI 190 African clawed ...
Q497L8       118 GYKHDSPCFDGYVYDQSKWRNSAVRNFNLVCDqkwyARMIQPLIIFGVMLGSITFSYLSDrfgRRMALWCTSIGVFFFGI 197 house mouse
NP_001020659 115 FGNKSVESCGAFVYDHSEVEQSIVTDWDLVCErewlAKLTQPTFMLGVLIGALMFGDAADrigRRPVLMATSLCQFIFGV 194 zebrafish
XP_419787    116 GNKSIFSCSDGFLYDVTKWKSTVVTQWDLVCDrewlAKLIQPTFMLGVLVGAVIFGDIADrlgRQRVMWFTSAGQFVFGI 195 chicken
XP_007892163 126 GNRTRHSCSDGFVYDQTHMENSIVTEWDLVCDkewlAKLTQPIFMIGVLLGAVIFGDIADrigRRSILWFTSTAQFVFGV 205 elephant shark
XP_006006106 116 GDKTRFLCSDGFLYDQTNIKSSIVTDWNLVCDrewlAKLSQPIFMLGVLIGAVLFGDIADrvgRRPVLWFTSTSQFVFGV 195 coelacanth
Feature 1                             ## ###  #               #  ##  #                           
Q86VW1       198 AaafavdyytfMAARFFLAMVASGYLVVGFVYvmefigmksrtwaSVHLHSFFAVGTLLVALTgylvrtWWLYQMILSTV 277 human
Q66KG0       191 AvaftfdyysfVIVRFLLAMVSSGYYVVVFVYlteyvgikartwaSMHVHAFFAVGVMIVSLVgflvrtWWIYQIILSLT 270 African clawed ...
Q497L8       198 AslfifdylsfMITRFFLVMASSGYFVVVFVYvmeiigkkartwaSIHLNTFFAIGAMLVALAsyllktWWLYQIILCIV 277 house mouse
NP_001020659 195 TvaftgnyylfVVMRFLLATVSSGYLVVVFVYvteftgikvrtwtSMHVHAAFAVGIMVVALVgylvrvWWIYQIILTLS 274 zebrafish
XP_419787    196 TvaftfdyysfVIVRFLLAMVSSGYLVVAFVYvtefvgikartwaSMHVHAFFALGIMVVALVgflvrtWWVYQIFLSIA 275 chicken
XP_007892163 206 AvaftsdyysfIIVRFLLALVSSGYLVVVFVYvteytglkartwaSMHVHAYFAAGIMVVALVgylvraWRYYQLVLSLV 285 elephant shark
XP_006006106 196 AvaftfeyysfIVTRFLLALVSSGYLVVAFVFvteytgikvrtwtSMHVHAAFAVGIMVVALVgylirtWWIYQIVLSLT 275 coelacanth
Feature 1                                                                                        
Q86VW1       278 TVPFILCCWVLPetpfwllsegryeeaqkivdimakwnrassckls-------ellsldlqgpvsnsptevqkhnlsylf 350 human
Q66KG0       271 TLPFVLCCWMLPetpfwlysqgkykeveklirtiekwnkistpck--------lselcpaqethvdqpntlknhnvldlf 342 African clawed ...
Q497L8       278 TTPFILCCWMLPetpfwllsegrykeaqgtvdtmavwnkssscdlv-------ellsldvtrshnksphsirkhrladlf 350 house mouse
NP_001020659 275 TSPFLLYCWKFPetpfylmakgrykeaqelldtmayinglpptlkvsd---lqdgcdrtplkdnkqamevekrlsmldmf 351 zebrafish
XP_419787    276 TLPFVLCCWMLPetplwllsqkryedaqkvinimarwnkvstpckvsel-csvqqddpgtdrtsgnatsstkkhnildlf 354 chicken
XP_007892163 286 TIPFIFCCWLLPetpwwllakgrheevqklmatiarwnkvdiscqlslaqmnssenamdkeitkeetvtkeekisivdlf 365 elephant shark
XP_006006106 276 TIPFILCCWTLPetpfwllakgkhedvqrvinrmaswnrvtasfevaqlqhgqqaslmdknsskantesttkkysildlf 355 coelacanth
Feature 1                       #  ##  ###  #                   #   #                            
Q86VW1       351 ynwsitKRTLTVWLIWFTGSLGFYSFSLNSvnlggneylNLFLLGVVEIPAYTFVCIAMDKVgrrtvlAYSLFCSALACG 430 human
Q66KG0       343 ynwsfaRRTITVWLIWFTGSLGYYVFALNSvnlggneylNLFLTGAVEIPSYIVACLGMDKIgrrntlAPFLIISAVICG 422 African clawed ...
Q497L8       351 hnldvaKMTLIVWLDWFTANLGYYMFGKEVirrkeneplYLLLVGAMEIPAYICLCIWLKRVgrrktmLLFLLVSSLTCM 430 house mouse
NP_001020659 352 gslkmaGRSATCWAIWFIGSLGYYVFSLGSvnlggnqyiNLFLAGAVEVPSYLIGCFAMDRFgrkktcAPALLLGGVACM 431 zebrafish
XP_419787    355 cnwyiaRRTITIWLVWFTGSLGYYVFSLSSvnlggneylNLFLIGAVELPCYIIACIGMDKLgrrntlIPFLILSALICV 434 chicken
XP_007892163 366 rdwnmaKRTITIWLVWFTGSLGYYVSSLGSvslggneylNLFLAGAVELPSYIIACFVMDKLgrrntlAPSLFLTGLACF 445 elephant shark
XP_006006106 356 gnsflvRRTITVWLIWFTGSLGYYVFSLSSvslagneylNLFLVGAVELPSYIVACIGMDRLgrrntlAPALGLSAVACV 435 coelacanth
Feature 1                              ##   #   #               #  ##  ##  #                     
Q86VW1       431 VVMVIpqkhyilgvvtAMVGKFAIGAAFGLIYLYTAELYPTIVRsLAVGSGSMVCRLASILAPFsvdlssiwifiPQLFV 510 human
Q66KG0       423 VIMLIpqdhstvtiamSMAGKFSIAVAFGLIYLYTAELYPTIVRsLAVGSGSMMCRIGSVVAPFcvyltdvwifmPQMLV 502 African clawed ...
Q497L8       431 LHVVMpsdyktakrmvALLVKSVISSVFAFIYLYTAELYPTTVRcLAVGSSNMVSHVSSIFIPFtshfskvwiflPQILF 510 house mouse
NP_001020659 432 LIIVVpqdvevlaivlSMTGKFAIAIAFGLIYLYTCELYPTIIRsLAVGSGSMMCRVGSVVAPFcvyladiwiylPQLIV 511 zebrafish
XP_419787    435 LIMFIpqdfnvliilaNMAGKFSIGVAFGLIYLYTAELYPTIVRsLAVGSGSMMCRVGSVVAPFcvylrsvwiflPLLLV 514 chicken
XP_007892163 446 LSMVVpqdiealsitlSMIGKFAIALAFGLIYLYTAELYPTIIRsLAVGSGSMMARVGSTVAPFcvllsavwiflPQLIV 525 elephant shark
XP_006006106 436 LIMVIpekyqvltivlSMTGKFTIAIAFGLIYLYTAELYPTIIRsLAVGSGSMLCRAGSVVAPFcvyltdiwiffPQLIV 515 coelacanth
Feature 1                       
Q86VW1       511 GTMALLSGVLTLKLP 525 human
Q66KG0       503 GIMAFLTGILTLTLP 517 African clawed frog
Q497L8       511 GILAILSGLLSLKLP 525 house mouse
NP_001020659 512 GILAFIIGILTMFLP 526 zebrafish
XP_419787    515 GIMALLSGILTLMLP 529 chicken
XP_007892163 526 GVMAFVTGLLTLMLP 540 elephant shark
XP_006006106 516 GVMALLTGMLTLMLP 530 coelacanth

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