Conserved Protein Domain Family
AP-5_subunit_s1

?
pfam15001: AP-5_subunit_s1 (this model, PSSM-Id:405659 is obsolete and has been replaced by 434380)
AP-5 complex subunit sigma-1
This family of proteins are subunits of the adaptor protein complex AP-5.
Statistics
?
PSSM-Id: 405659
Aligned: 15 rows
Threshold Bit Score: 209.498
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
XP_002416012   1 MVLAFLILSv--------SEKASGVIHSTAYSlnraGTshSDESNTVRNEPDELEEDFQR--GPSEMNEE-HKAQSDLFK 69  black-legged tick
CAQ39486       1 MVYGIIIHS---------SERHEKYYFSYYYD----AEksKVDVEEEENDCIRQQTIIKRvlEEITYYENeKMKTDNTAK 67  Plasmodium know...
EEN44006       1 MVRSVIIQTv--------TPGPCRVLYAQMYG---------CAGDQTGSLAQTAARGRQK--EQVATVAR-QVQSECSFQ 60  Florida lancelet
XP_003730604   1 MVYAFIIHTl--------PPDTCRVLFSCTFGl---EDagVDDHRIENEGDVTEMRTLRK--EQMALVAR-QVQSEFSFQ 66  purple sea urchin
XP_011438995   1 MVYAFVIHTl--------LPGPCRVLYHNVYG---------QDATYSDEVNDAEHKNRRR--NHIQLIAN-EVHSEYQFR 60  Pacific oyster
XP_003227913  34 MVHAFIVHTlrswgrsgdEAPPCRVLYSRVFS----PE----RPEGGGGRDPEKERLAQK--ERILAVAR-QVDSVCKLH 102 green anole
XP_016283704   1 MVHAFLIHTlsgsgqatgDATFCRVLYSQVFG----SE---RLPDEPGPRGPERDRLLRK--EQLLAVAR-QAETACKLL 70  gray short-tail...
XP_019682343   1 MVHAFLIHNlrap--qaqDTGLCRVLYSCIFG----AE---NSPDDPRPHGAERDRLLRK--EQILAVAR-QVESMCQLQ 68  domestic cat
OCA28303       1 MVYGFVIHTvgat--ldeTPNSSRVLYSKVFN----YDm-LDQKQNSDEQYLHNERIKRK--QRIAIVAR-QAESMCLLS 70  tropical clawed...
XP_006005779   1 MVHGFLIHSlglg--ssgDSGLSRMLYSRMFN----SEp-KDPVLGADEQDLEEERLLRK--EQLAAVAR-QVKSSCILS 70  coelacanth
XP_002416012  70 R---VHQHVVEDMKSALHHTSIAGAeaslhpieKKGAFFLNDTD--SP---ESIVVWHSFGDCCFVLMCDSDENVSLGGQ 141 black-legged tick
CAQ39486      68 KhreKYFDLLDAFLSKNNNDEGKIN--------GEGFFRIINPSlfKN---RINVLWKVVNKICYTLVFYAHENIHLADY 136 Plasmodium know...
EEN44006      61 QhcaAADPVGEEVRRHLSQEGAVVP--------QTGIFQMPPGEpfGT---KVFTVWQTAANCGLALVCENHENRQQAAA 129 Florida lancelet
XP_003730604  67 Ka-vSERVTYSDGLSSGQED--WMRd------aELGMFRLAAGDpfKT---EKIAVWLGAGKTGFILVCETHENRLQVEN 134 purple sea urchin
XP_011438995  61 Ra-vQSRAVEDDIQRMGNDD--TLPd------fEFGCIRLPEGNpfTV---ERIALWLGAGNSGFTLVCEKSENRLLAEN 128 Pacific oyster
XP_003227913 103 Lq-aAGRPTWEPLAPAP-EDPSPLQd------aPSGAFRLPPGDpfPAaegERAVLWLGVHSVAFALVCGPQENPLLAEC 174 green anole
XP_016283704  71 Qq-aSGRP-PTDLLPQSSDEPIPLQd------aPSGVFRLRPGDpfQE---AKVVVWLRLLSLGCALVCEPHENLLLAES 139 gray short-tail...
XP_019682343  69 Qq-aSGRT-SVDLQLQSSDEPVPLHe------aPHGAFRLAAGDpfQE---PRTVVWLGVLSLGFVLVLDAHENLLLAES 137 domestic cat
OCA28303      71 Rq-aSGRP-ASDFIVHPTDEPIYLLe------eDVGVFSLPPGDvfTS---EKIVLWVSVFSLGFSLICDSQENLTLAEC 139 tropical clawed...
XP_006005779  71 Wq-aAGKT-LHEFGLPPSDEPSVLQd------aEFGVFRLPLGDpfSE---TKIVVWLGIWFLSFTLICDPHENLMLAEN 139 coelacanth
XP_002416012 142 ILRQIIHSISCHVVFVTP--SEL---LAKAGLVHAIVKLYLPAGKLLFVNQNVVKQYEQLL 197 black-legged tick
CAQ39486     137 FLHTFINALREQHDSVKRkkCKSnmeLFHPDTVLAVLYFFLPKGQLLLMNENHANFLNSQV 197 Plasmodium knowlesi strain H
EEN44006     130 TLSQIFRLLRQHLRVLTQp-EEV---LQKADRVAAILHHFLPQGQLLFLNSRAVRHKEKEL 186 Florida lancelet
XP_003730604 135 QLRLLVKNLQEHVKAVRQp-IEV---LEKGDRVMAVLHHFLPSGRIIFMNHALIKQTEKEL 191 purple sea urchin
XP_011438995 129 VLKILIRFIQEHVRVINQp-SEA---RLKSDKIALILSRFLPNGNLLFMNHRVVRQLEKEV 185 Pacific oyster
XP_003227913 175 ALRSVARSLLDHLHLLGSg-SEV---LLKADRTEAVLARFLPHGQLLFLNDQFVAGIEREV 231 green anole
XP_016283704 140 TLRLLTRLLLEHLKLLSSg-SNV---LLRGDRIEAILNHFLPQGQLLFLNDQFVQALEKEL 196 gray short-tailed opossum
XP_019682343 138 TLRLLARLLLDHLRLLTPs-TNL---LLRADRIEGILARFLPHGQLLFLNDQFVQGLEKEL 194 domestic cat
OCA28303     140 TLRTVVKYLVDSLKLLTNs-SNV---VLKADKIEMSLDKFMPHGQLLFLNHQATQALEKEL 196 tropical clawed frog
XP_006005779 140 TLRTVTKYLLEYLKPLSQg-SEI---LLKADKIEVILNRFLPHGQLLFINHRFVHSLEKEL 196 coelacanth
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap