Conserved Protein Domain Family
PLN03025

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PLN03025: PLN03025 
replication factor C subunit; Provisional
Statistics
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PSSM-Id: 178596
Aligned: 16 rows
Threshold Bit Score: 579.762
Created: 9-Dec-2010
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
145353045   1 MPWVEKYRPKTLDDLVGNDDAVDRMRTMVRSGFMPNLIFSGPPGCGKTSAIGVLARELLGDKYKEAVLEMNASDERGIDV 80 
159484076  23 LPWLEKYRPQFINEIVGNTEAVARLQVIAEEGNMPNVILSGPPGTGKTTSILCLAHQLLGPNYKEAVLELNASDDRGIDV 102
167999374  16 LPWVEKYRPHRVADIVGNQDVVARLQVIAQGGNMPNLIFSGPPGTGKTTSILALAHELLGPNFKEAVLELNASDDRGIDV 95 
219127681  32 VPWVEKYRPRVLEDVVGNEETVSRLRAISRTGNLPNLILAGPPGTGKTTSVHALARQLLGASYKDAVLELNASDARGIDV 111
224074887  12 IPWVEKYRPNKVADIVGNQDAVSRLQVIARDGNMPNLILAGPPGTGKTTSILALAHELLGPNSKEAVLELNASDDRGIDV 91 
255537345  15 VPWVEKYRPSKICDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHELLGPNYKEAVLELNASDDRGIDV 94 
255070803  10 LPWVEKYRPTKIDDIVGNKDAVDRLTAIASTGNMPNLIFTGPPGIGKTTSVLCLAHTLLGPSYKDAVLELNASDDRGIDA 89 
297837097  16 NPWVEKYRPSKVVDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHELLGPNYKEAVLELNASDDRGIDV 95 
302770687   9 LPWVEKYRPQKLADVVGNQDAIGRLQVIARDGNMPNLIFSGPPGIGKTTCIMAMAHEMLGALAKEAVLELNASDDRGIDV 88 
303271997  11 LPWVEKYRPTKIDEIVGNADAVERLAAMAATGNVPNLIFSGPPGIGKTTSILCLAHTLLGPAYKDAVLELNASDDRGIDV 90 
145353045  81 VRNKIKMFAQKKVTLAPGRTKLVILDEADSMTTAAQQAMRRTMEIYSATTRFALACNTSEKVIEPIQSRCAIVRFGKLTD 160
159484076 103 VRNKIKMFAQKKVTLPPGRHKIVILDEADSMTAGAQQALRRTMEIYSGTTRFALACNMSSKIIEPIQSRCAIVRYTRIPD 182
167999374  96 VRNKIKMFAQKKVTLPPGRHKVVLLDEADSMTAGAQQALRRTMEIYSNTTRFALACNLSSKIIEPIQSRCAIVRFSRLSD 175
219127681 112 VRNRIKSFAMNKVTLPPGRHKIIILDEADSMTSAAQQALRRTMELYSNTTRFCLACNVSTKIIEAIQSRAAILRYSRLAN 191
224074887  92 VRNKIKMFAQKKVTLPPGQHKIVILDEADSMTSGAQQALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCAIVRFSRLSD 171
255537345  95 VRNKIKMFAQKKVTLPPGRHKVVILDEADSMTSGAQQALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRFSRLSD 174
255070803  90 VRNKIKMFAQKKVTLPPGRHKIILLDEADSMTSAAQQALRRTMELYSSTTRFALACNASEKIIEPIQSRCAIVRFTRLSD 169
297837097  96 VRNKIKMFAQKKVTLPPGRHKVVILDEADSMTSGAQQALRRTIEIYSNSTRFALACNTSSKIIEPIQSRCALVRFSRLSD 175
302770687  89 VRNKIKMFAQKKLTLPRGRHKVVILDEADSMTSGAQQALRRTMEIYSSSTRFGLACNLSSQIIEPIQSRCAIVRFTRLSE 168
303271997  91 VRNKIKMFAQKKVTLPPGRHKIVLLDEADSMTSAAQQAMRRTMEIYSNTTRFALACNASEKIIEPIQSRCAIVRFTRLSD 170
145353045 161 AQVLKRLMTVVEAEKVTYVPKGLEAIVFTADGDMRQALNNLQSTA-LGFGMVNEENVFRVCDQPHPNIVRDAFSFILQGN 239
159484076 183 EDILARMRLVAEKEGVTYNDAGMEAVIFTADGDMRQALNNMQATH-SGFGFISQENVFKVCDQPHPKLVMGIIAKCKAGD 261
167999374 176 SEILDRLLRVVEAEKVPYVPEGLEAVVFTADGDMRQALNNLQATF-SGFQFVNQDNVFRVCDQPHPLLAQQIIKHCIAGN 254
219127681 192 EQVLTCLLKVCQAESISYTNDALEAILFTAEGDMRHALNNLQASYfLTNGIISQTSVFKVCDQPHPKTVGQIISHCTKGD 271
224074887 172 QEILGRLMVVVGAEQVPYVPEGLEAIIFTADGDMRQALNNLQATH-SGFHFVNQENVFKVCDQPHPLHVKNMVRQVLEGK 250
255537345 175 QEILGRLIIVVQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATY-SGFRFVNQENVFKVCDQPHPLHVKNMVRHVMEGK 253
255070803 170 QEVLERIVKVVEREEVPYVPDGLEAVVFTADGDMRQALNNVQATH-SGFGFVNQENVFKVCDQPHPQIVVDCVACCLRGD 248
297837097 176 QQILGRLLVVVEAENVPYVPEGLEAIIFTADGDMRQALNNLQATF-SGFRFVNQENVFKVCDQPHPLHVKNIVRNVLESK 254
302770687 169 QDILARLLKVAAAEKVPYVPEGLEAVVFTADGDMRQALNNLQATY-SGFQFVNRENVFKVCDQPHPLLVSTMIQNTLAGK 247
303271997 171 QEVLERVMKVVEKEEVPYVPDGLEAVVFTADGDMRQALNNLQATH-SGFGYVNQENVFKVCDQPHPQVISDMLTHCLRGN 249
145353045 240 VDDAYARLKSLHDQGYSVFDIIGTMYRVCKNFDdtaMPEFIKLELIRIIGFTHLRLSEGCATMIQIGGGVARMVELVSDA 319
159484076 262 LDAAYAGMKELQDMGYSPMDIITTVFRVVRNAD---IPEFLKLEYLREIGFCHMRVSEGVNSRLQLSGLLAKLCSKTLIA 338
167999374 255 IDDAYTGLKQLYDMGYSATDIITTLFRVVKNYE---MVEFLKLEFIREVGFAHMRIADGVGTLLQLSGLLAKLCKVRERC 331
219127681 272 TKAACDQMQALWKSGYSTNDIIGTVFKVVKAHGe--LPEALKLEYLREIGFTQMRISDGVNSPLQLLGLLARLAQKMQQT 349
224074887 251 FDDACSGLKHLYDMGYSPTDIITTLFRIIKNYD---MAEYMKLEFMKETGFAHMRICDGVGSYLQLCGLLAKLALVRDTA 327
255537345 254 YDDACSGLKQLYDLGYSPTDIITTLFRIIKNYD---MAEYLKLEFMKETGFAHMRICDGVGSYLQLCGLLAKLALVRDTA 330
255070803 249 VDHAHDKMKSLHDAGFSAADVIGTVYRVVKNFDaesMPEFVKLEMIREVGFTHMRIGDGVNSLLQLGGMCAKMCQVVERA 328
297837097 255 FDDACHGLKQLYDLGYSPTDIITTLFRIIKNYD---MAEYLKLEFMKETGFAHMRICDGVGSYLQLCGLLAKLSIARETA 331
302770687 248 IDEAYLGMKQLYDLGYSASDIITTLFRVVKNFD---MPEFLKLEYIKEVGFAHMRIAEGVGSLLQLTGLLAKLCLLREKA 324
303271997 250 VDDAYDRIKFLYAAGFSAMDIIGTVYRVTKNFNseaMPEFVKLEFIREIGFMHMRVGDGVNSLLQMAGLCAKLCKVVECA 329
145353045 320 KKM 322
159484076 339 AR- 340
167999374 332 KA- 333
219127681     ---    
224074887 328 RAA 330
255537345 331 RAA 333
255070803 329 KTG 331
297837097 332 KAP 334
302770687 325 KA- 326
303271997 330 KAG 332
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