Conserved Protein Domain Family
CXCL17

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pfam15211: CXCL17 (this model, PSSM-Id:405817 is obsolete and has been replaced by 464565)
VEGF co-regulated chemokine 1
Statistics
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PSSM-Id: 405817
Aligned: 11 rows
Threshold Bit Score: 91.4755
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
AAH24561      23 SpnpGVARSHGDQHLAPRRWLLEGGQECECKDWFLQAPKRKAT--AVLGPPRKQCPCDHVKGREKKKQ-TPKAPQEVAKt 99  house mouse
XP_021590881  19 T---GVARGHRDQRQASGRRLLKGSQECECKDWFLRASKKKPM--TEAGLPKKRCPCDHSTVGVKKTR-HRRHHKKSNK- 91  thirteen-lined ...
XP_003406711  22 SpnpGVARGHRDQRQASRRSLQKDSQECECKDWLLGAPKRKSMtvTVPGLPKKPCPCDHFKGNVKKIR-HQRHHKKPNK- 99  African savanna...
XP_005589434  23 SlnpGVARGHRDQGQASRKWLQEGGQECECKDWFLRAPRRKVM--TVSGLPKKQCPCDHFKGNVKKTR-HQKHHRKPNK- 98  crab-eating mac...
2_pfamImport   1 SsdpEAAGGQRHHKLHAWRHPQGRRQLCRCEDVFQKIHERRKL--QVAKSPASHCPCVRPKHKWKKPG-HQKHWRQ---- 73 
XP_022259202  23 SpnpGVARGHRDNRQAPSRRLQEDGQECECKDWFLRAHKRKLI--TVPGMPKKQCPCDHFKANVKKTR-NQRHHRKPNK- 98  dog
Q5UW37        23 SpnpGVARSHGDQHLAPRRWLLEGGQECECKDWFLQAPKRKAT--AVLGPPRKQCPCDHVKGREKKNR-HQKHHRKSQR- 98  house mouse
AOS51258      23 SpntGIARGHRDPRQASGKWLQEDVQECECKDWFLRAPRRKFM--TAHGLPKKPCPCDHFKGRVKKTR-HQRHHKKQNK- 98  pig
A4IFR0        23 SshtGVARGQRDQRQASGRWLREGGQECECQDWFLRAPRRTLM--AAPRL-TKPCPCDHFKGRMKKTR-HQRHHRKSNK- 97  cattle
XP_008247912 106 tphsGVARGHGDQRQTSGRWLWEDGQECECKGWFLRAPKRKLM--TVPRLPKKHCPCDHFKGTVKKTRgHQKSHRQPNK- 182 rabbit
XP_012316961  23 SpnpGVARGHRDQGQASRRWLQEGGQECECKDWFLRGPRRKLM--TASGLPKKQCPCDHFKGNVKKIR-HRRHHRKPNK- 98  Ma's night monkey
AAH24561     100 lqslpaisqtmsPGKLCAALivLRLCS 126 house mouse
XP_021590881  92 ------------HSKACWQF--LQRCQ 104 thirteen-lined ground squirrel
XP_003406711 100 ------------HSRACQQF--LQRCQ 112 African savanna elephant
XP_005589434  99 ------------HSRACQQF--LKQCQ 111 crab-eating macaque
2_pfamImport  74 ---------------SCFQF--LKQCQ 83 
XP_022259202  99 ------------HSRACQEF--LKQCQ 111 dog
Q5UW37        99 ------------PSRACQQF--LKRCH 111 house mouse
AOS51258      99 ------------PSRACQQF--LRRCQ 111 pig
A4IFR0        98 ------------PSRACQQF--LTRCl 110 cattle
XP_008247912 183 ------------HSRACQQF--LKRCQ 195 rabbit
XP_012316961  99 ------------HSRACQQF--LKQCQ 111 Ma's night monkey
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