5ZX5


Conserved Protein Domain Family
LSDAT_euk

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pfam18139: LSDAT_euk (this model, PSSM-Id:407971 is obsolete and has been replaced by 465665)
SLOG in TRPM
Family in the SLOG superfamily, found in several eukaryotic channels including diverse ciliate channels and the TRPM class of animal ion channels. Positioned near the N-terminus of all TRPM channels, it is predicted to play a regulatory role for the channel in potentially recognizing a universal nucleotide or nucleotide-derived ligand.
Statistics
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PSSM-Id: 407971
Aligned: 32 rows
Threshold Bit Score: 315.662
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
5ZX5_A        105 AKYVRLSYDTKPEIILQLLLKEW-------QMELPKLVISVHGGMQKFELHPRIKQLLGKGLIKAAVTTGAWILTGGVNT 177 
XP_024507084  241 ANYIRLSFDSDPADIVKLFANVW-------KIPPPKLIITIHGGMTNFDIQTKLTRVFRKGLLKAARTAGAWIITSGINA 313  Strongyloides...
VDN94084      277 AQYLRLTVESNPADIMDLFESVW-------NVPAPKLIITVHGGMTDFDLQPKLARVFRKGLLKAAKTTGAWIITAGINA 349  Brugia pahangi
VDD91528       34 AQYLRLNVETDPADIMNLFDNVW-------RMPPPKLIITVHGGLSNFDLQPKLARVFRKGLMKAARTTGAWIITSGL-- 104  human pinworm
EDO47658       34 AKYIRLAHDTDPELVLRLLCGEW-------ALDLPKLLISVTGGAKNFILSPKIKRVLREGLLKAAQTTGAWVITGGTNT 106  starlet sea a...
XP_001749743   91 APYVRVSLKDDAQDVLKFVQANLyrhfgnrNYPAPSLILSVTGGAQSFDLPPRLRDAIKRGLTKAVASTDAWVVTGGTHS 170  Monosiga brev...
EGD73753       84 APYLRLSVNDNPEDALLFVKGMLtqk-ygeTYDRPSLILSVTGGARNFTLPPRLETAIAKGLRLAAQRTNAWVVTGGTNT 162  Salpingoeca r...
XP_004993318  108 APYLRLSVNDDPEDALLFVKAMLaqk-ygeTYDRPSLILSVTGGARNFTLPPRLETAIAKGLRLAAQRTNAWVVTGGTNT 186  Salpingoeca r...
5_pfamImport    1 AQYVRLSFDSDCSSIIHLLQNIW-------QIPPPKLVISIHGGTNNFNLQPKLARIFRNGLIKSASTTGAWIITSGCDD 73  
6_pfamImport    1 AQYVRLSFDTECSSIIHLLQNIW-------QIPPPKLIISIHGGTGNFNLQSKLSRIFRNGLVKAASTTGAWIITSGAEN 73  
5ZX5_A        178 GVAKHVGDALKEH-----AS-R--SSRKICTIGIAPWGVIENRNDLV---GRDV-VAPYQTLL-NPLSKL-NVLNNLHSH 243 
XP_024507084  314 GVVRHVAAALDGG-----ASlVgkGKSKIVTIGVAQWGLLKKRDSLI---GQDC-VVPYHPHSfSTKGKL-QVLNNRHSY 383  Strongyloides...
VDN94084      350 GVVRQVAAAIDGS-----GS-VsrVRSKIVTIGIAPWGLLKKRDNLL---GQDA-VVPYHPHSfSPKGRF-AVLNNRHSY 418  Brugia pahangi
VDD91528      105 ---------FDEA-----SS-SarGRSKIVSIGIAAWGMLKEQADLI---GQVS-WSSSLSEEvYFKGRL-S-LNNRHSH 163  human pinworm
EDO47658      107 GVMRHVGEAVKGHtvmsrGEqLknTAHQVHLIGIASWGIVDHKEMLV---NPKVeVVPYQMTS-SMQSRG-ACLDNNHSH 181  starlet sea a...
XP_001749743  171 GVMQLTGSIMSDL--------L--RDRFVPVVGVITWGILKDRKEME---QPQYrAKPYVVQD----QMF-KCPDHNHNM 232  Monosiga brev...
EGD73753      163 GVMKLTGQIMEAL-----SKtQ--SHFIPPTIGIATFGVIVGGADLSa-tGSNEpPKRDHLFDiTKKDGFkAPLDPNHNL 234  Salpingoeca r...
XP_004993318  187 GVMKLTGQIMEAL-----SKtQ--SHFIPPTIGIATYGVIIGGDDMTrgePPKI-GLEYEMHK-KDPPKT-TPLDDNHNL 256  Salpingoeca r...
5_pfamImport   74 GVTRHVAAAIESC-----HN-SsrNKAKIISIGIAPWGLLKRREDFI---GKDH-TVLYRKTGnNMKSRF-ITLNNRHGY 142 
6_pfamImport   74 SLTRQVGAAIESA-----QN-SirNKTKIISIGIASWGLLKRREDFI---GKNH-TVFYRKMGnNAKSRF-ITLNNRHSY 142 
5ZX5_A        244 FILVDDGTVGKYGAEVRLRRELEKTINQQRIHarIGQGVPVVALIFEGGPNVILTVLEYLQEspPVPVVVCEGTGRAADL 323 
XP_024507084  384 FLLVDNGTVGRYGADIILRRRLESYIAQKQKVgeGNRGVPIVCVVLEGGTCTIRTVLDYVANipRVPVVVCDGSGRASDL 463  Strongyloides...
VDN94084      419 FLLVDNGTIGRYGADVILRKRLESYISEKRTLgnGTRSVPVVCVVLEGGTCTIKAVYDCVCTspRVPVVVCDGSGRAADL 498  Brugia pahangi
VDD91528      164 FLLVDNGTVGRDGADIILRKRLETYIAEKQKIggGTRSVPVVCVVLEGGTCTIKSVVDYVTStpLVPVVICDGSGRAADL 243  human pinworm
EDO47658      182 FILVDNGTDGEYGGEISFRASLENLIASKKMAq-kFHGVPVVLLVLEGGPNTIRTVLESVSRcpAVPVVIAEGSGRAADI 260  starlet sea a...
XP_001749743  233 FVFVDSG-IDDFGGEIEVRAQFEQAAR-------VEYNAPTITIVIQGGPGTMKTAMESVRA--GNPIVVVDGSGLAADV 302  Monosiga brev...
EGD73753      235 FMLVDDGTT-EFGREITFRAAFEKAAA-------TAFGAPVITIVVQGGPGTLNTALQAVRQ--GTPIVVVDGSGLAADV 304  Salpingoeca r...
XP_004993318  257 FLLVDDGSTNKFGKEIKFRAAFENAAG-------QAFAAPVVTIVVQGGPGTLGTALQAVRQ--GTPIVVVDGSGLAADV 327  Salpingoeca r...
5_pfamImport  143 FLLTDNGTVGKWGSEIILRRRLEGYIKENQTIvnEGKTIPVVCVILEGGTFSIRTALQYVTTipKTPVVICDGSGRASDM 222 
6_pfamImport  143 FLFTDNGTVGKAGSEVVLRRRLEMYINEKQTIvsGGRTVPVVCVMIEGGVYSIKTALQYVTSipRTPVVVCDGTGRASDL 222 
5ZX5_A        324 LAYIHKQTEEGGN-LPDAAEP-----DIISTIKKTF-NFGQSEAV--HLFQTMMEC 370 
XP_024507084  464 IAFAHRFVLDNGQ-LPEGVQP-----QLLHLIQNVF-FYSKPESE--NLLLDLLEC 510  Strongyloides ratti
VDN94084      499 LAFAHQYVQEDGQ-LPERVKP-----QLFSLVQFVF-GYDDDAAE--KLLEQLMMC 545  Brugia pahangi
VDD91528      244 LAFAHQCVQEDGK-LPENVQR-----QLLSLIESVF-GYDKQNAE--SLLADLTKC 290  human pinworm
EDO47658      261 LAFAHRFIAPSNG-EMSGVADvvehrQLLHKIEKSFaECSPEDRL--SIYQNVLKC 313  starlet sea anemone
XP_001749743  303 LAYAYQFLHSGNSrHRSHTVQ-----ELKAIIATQFaHLPGDKQV--DLMHQAFEC 351  Monosiga brevicollis MX1
EGD73753      305 LAYAYNFMHNPRSrFTSYTIE-----DLKTMVKNTF-NTGDDDAKltQLLDKALEC 354  Salpingoeca rosetta
XP_004993318  328 LAYAYNFMHNPLTrFKSYTID-----DLRQKVAQTFnPKSSQQLT--NLLDSALEC 376  Salpingoeca rosetta
5_pfamImport  223 ISFAHHYIQDDGN-LPEILRK-----QLLSLIESVF-QLTKEEAE--HLLKDLLEC 269 
6_pfamImport  223 ISFAHQYIQDDNT-LPDGLRI-----QLLSLIESVF-QLTKDEAE--HLMNDILSC 269 
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