Conserved Protein Domain Family
AAA_33

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pfam13671: AAA_33 (this model, PSSM-Id:404546 is obsolete and has been replaced by 463952)
AAA domain
This family of domains contain only a P-loop motif, that is characteristic of the AAA superfamily. Many of the proteins in this family are just short fragments so there is no Walker B motif.
Statistics
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PSSM-Id: 404546
Aligned: 66 rows
Threshold Bit Score: 60.3855
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q7V779           347 IVLMHGLSGSGKSFLSEQ-LYQQLP---AVRLRSDI---ERQ--RAFGrrplhkL----------Lgfekgsmtsvgikp 407  Prochloroc...
jgi:GYMC10_2537    5 VIMTVGKTHSGKTTFAKE-LESVLQq--AIVIDQDNhaeFIN--SHYM------Klr------piE-------------- 53   Paenibacil...
Q5RHQ7           416 VIVMVGLPGSGKTTWVVK-HVEENPg-kYNILSTNT---VLE--KLMIns--vkRqnk-----diT-------------- 467  zebrafish
CAP20494        1219 VLMTVGLPGVGKTTWVRR-YLAEHPhehWTLISADV---VID--AMKV------Ngvp-----riR-------------- 1267 Caenorhabd...
Q16R25           627 LIFLIGMPASGKTHWVTN-YLKENAdkkITLLSVHS---LLDqmKLAGe----pRkpq-----ntK-------------- 679  yellow fev...
EDS32444         631 VIFMIGMPSSGKTHWVKNyLAENPDk-rYTVLSVDS---LLS--QMKV------SgkprlpsntgK-------------- 684  southern h...
EDW48494         709 VILLVGLPGAGKTHWAHK-HVAENAdkrYELIGPDA---FIS--KMTI------Dgas-----rkTvh------------ 759  Drosophila...
CAH67657         260 iMMMVGLPASGKSTWAEK-WIKEHKekrFILLGTNL---ALV--QMKV------Pgll-----rkN-------------- 308  rice
ESS33850         188 fIMMVGVPACGKTFWAEQ-HCRANPrksFVLLGTNA---VID--QMRV------Mgvk-----rqS-------------- 236  Toxoplasma...
XP_309097        688 LVMMIGLPGSGKTTWVQN-YLKENAdtsFTLLSIDS---LLE--NMKVegk-arEpsn-----tpQ-------------- 741  Anopheles ...
Q7V779           408 lfqgdpYRPE----VTQWl--FDQ----CLPALTQSCLSSG---YTTIVDATFLRERERQ-RMFVLARQQGCPI-AIVAC 472  Prochloroc...
jgi:GYMC10_2537   54 ------GPNT----LKFS---ITN----AIVNYA--MEQSN---FHIILSNSNLNKSGRT-NVLQNFHDNGFES-IIVHF 109  Paenibacil...
Q5RHQ7           468 ------KLMA----ISQR---VPF----YLGKLIEIAARKK---RHYILDQTNVSSAAQR-RKMCLFA--GFQR-KAVVV 523  zebrafish
CAP20494        1268 ------LPTLk---RPDF---LRGiigkSMSRLISLAPRRR---KNYILDMTNCMADRRK-KKLMGFE--EFNR-KCMIF 1328 Caenorhabd...
Q16R25           680 ------KWSR----LVDQ---LSK----SLNKLSDIASKRR---RNYIFDQTNVFPSEQKrKLRGFGE-FAAR--KAVIV 736  yellow fev...
EDS32444         685 ------WPKL----VDTL---AK-----NLNKLNEAAAKRR---RNFILDQTNTFASEQK-RRLRVFGGFA-AR-RAIVV 740  southern h...
EDW48494         760 ----kgRWDK----VYEI---CLN----SLAALEDIAMKRR---RNFILDQTNVYASAQR-RKMKGFN--DFKR-IAVVC 817  Drosophila...
CAH67657         309 ------NYGErferLMDR---ATM----IFNTLLTRAAKIP---RNYIIDQTNVYKNARS-RKLRPFA--NYRK-TAVVV 368  rice
ESS33850         237 ------NYAE----RWEElmtTAT----SVFNTLIERASSGavpRNVIIDQTNVFKNARR-RKVQPFREWGVR--RAVTI 299  Toxoplasma...
XP_309097        742 ------WQKV----VEQL---SRN----M-ARLIEIACKRR---RHILIDQTNVFASEQK-RRLKGFG--GFKTrRAIAV 797  Anopheles ...
Q7V779           473 ECSDFTAQERIATRMGIGT--DPSEADLSVRELQKAWIEP-L 511  Prochlorococcus marinus str. MIT 9313
jgi:GYMC10_2537  110 NLPIDLLKERVTQTQRSKAifRSALSFLEVLERQENTIEIqP 151  Paenibacillus sp. Y412MC10
Q5RHQ7           524 FPTDENLKERAQKKAEADG--K--DIPEHALLKMKALYTL-P 560  zebrafish
CAP20494        1329 VPDEDTHMKRLIKQEHEEN--EK--LDTDAVMQYKAAMSL-P 1365 Caenorhabditis briggsae
Q16R25           737 VPDEAEHERRIKLKNEVFG----VEVPESHLNVMKAHFHIpP 774  yellow fever mosquito
EDS32444         741 IPDEEEYNRRLKQKQDTYG----VEVPEGQVNVMKAHCYL-P 777  southern house mosquito
EDW48494         818 IPSEDELKRRIAEKEEK-G--NAFTVKESTINNLRANFTL-P 855  Drosophila sechellia
CAH67657         369 FPSPSELKVRAAKRFKEMG--KD--VPADAVNEMTANFVL-P 405  rice
ESS33850         300 VTDERTLQQRTAKREREEG--KF--VPVSAVMDMKAAFSL-P 336  Toxoplasma gondii VEG
XP_309097        798 IPNLEEYKRRYEQKVAKYG----AEVPETTLNTMKANIFV-P 834  Anopheles gambiae str. PEST
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