Conserved Protein Domain Family
VPS9

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pfam02204: VPS9 (this model, PSSM-Id:366977 is obsolete and has been replaced by 460489)
Vacuolar sorting protein 9 (VPS9) domain
This domain acts as a GDP-GTP exchange factor (GEF). It activates Rab GTPases by stimulating the release of GDP and allowing GTP to bind.
Statistics
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PSSM-Id: 366977
Aligned: 44 rows
Threshold Bit Score: 73.3969
Created: 26-Apr-2021
Updated: 29-Sep-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_011392254  773 VQQCGDELQRLESAmcRSPQAKLDVLVRAHKIAVEGVaqlpsikmrdddtavegqekeqtarpsSGKKGDGSTSADLILP 852  Ustilago mayd...
XP_004764228 1552 fASAVECLQQISTT--FTPSDKLKVIQQTFEEISQSVl--------------------------ASLQEDFLWSMDDLFP 1603 domestic ferret
Q2HFI4        381 LGRAVEEFRKMPHA--SCPQEMMEILLATTKAATQLSdapqpg----------------qalgsATEKPPMTINADTLVS 442  Chaetomium gl...
Q6BJ87        366 IYKAIDEFSKLSDAsiLNSSGKTQILKNTVNILTNNVkqisei----------------esmteKTGSDGITVNADILIG 429  Debaryomyces ...
Q75CA6        312 VVQATECFSKLTLT--NSHHEKARILISTFQKLTTKT---------------------------SQATLDPMIDADTLLG 362  Eremothecium ...
KIS67849      615 HGTSHGELHR------RTPLQILQTLRATIDEIGWAAdrhpts---------------sgrrasSSHERPPPLGTDDLLP 673  Ustilago mayd...
Q22BJ9        878 YYKAIKKLQNLTFY--NSPVHKMKLLVQCFELIPQCVsefy--------------------eknIDYLEQNLIASDDLIN 935  Tetrahymena t...
Q24BB5        653 YYKCFKYILKIKKQ--QSPIGKMKMIVKASENILVCInnfy--------------------kmyGIQQNN-FLDADDVLS 709  Tetrahymena t...
Q24CA2        842 fDLCINALKQVLVE--KKPIGKLRLILKVFDNIQRCIhkf---------------------yhkNNSNEKVQIGPEDLMD 898  Tetrahymena t...
Q2M0A1       1393 FEESVQTLKQLQEK--FSPQDMLTVIQRSTQLLTEAYe-------------------------hAMSANAAQLNADNMIP 1445 Drosophila ps...
XP_011392254  853 ILIYSIVSSNPSHLASNLLYIQRF---R-AESLVQGETSYCLVNVQAAVAFLENVDV 905  Ustilago maydis 521
XP_004764228 1604 VFLYVVLRARIRNLGSEVHLIEDL---M-DPYLQHGEQGIMFTTLKACYYQIQRekl 1656 domestic ferret
Q2HFI4        443 LLLYVVIKAQIKHLQARLAYIQNF---VfIDDVESGEMGYALSTCEAVLSYLDRDSG 496  Chaetomium globosum CBS 148.51
Q6BJ87        430 LLIMVIVHARVDNLEAHLYYIKHF---NsVDYTNDGYFCYILSNFDAVIYHLSSSMN 483  Debaryomyces hansenii CBS767
Q75CA6        363 LMVVVVCRAQVKNLKSHLDYLREFa--QnSDDVKFGLLGYSLSTLEAVVGYFDIGGS 417  Eremothecium gossypii
KIS67849      674 ILSFVFVRARPGRLCSMLYYARTF---QlTDTATSPELQWALITCDAVVAYLRTDPL 727  Ustilago maydis 521
Q22BJ9        936 ILVFIVLKSKCTQINSHLKLISSF---L-SKSTQQSKIGYYCTTLQIVCGYLESDKI 988  Tetrahymena thermophila SB210
Q24BB5        710 IFSYFTCKCFQHEMNTHIKLISKF---I-TSNLLNSISGYYLTTLSASLQNILEFRN 762  Tetrahymena thermophila SB210
Q24CA2        899 ITVYILAKSQQYQIIHDINIVRSF---ItKNTEYSDKAGYYLQTLEAAFQYIIETEf 952  Tetrahymena thermophila SB210
Q2M0A1       1446 LTMLTMLRAAVPHLGAELALLDDLtggPnFQAEMNGMAGYCYTTLKAAYEHVTLKAL 1502 Drosophila pseudoobscura
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