Conserved Protein Domain Family
Gastrin

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pfam00918: Gastrin (this model, PSSM-Id:395734 is obsolete and has been replaced by 459996)
Gastrin/cholecystokinin family
Statistics
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PSSM-Id: 395734
Aligned: 20 rows
Threshold Bit Score: 94.5101
Created: 22-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_004073921   4 GLGVCVVLAVL--CTSCLGLPVSsapsdegqhsLSAPS--EVALPEADTkSLDg-----AHVRHS-RS----TT---QL- 65  Japanese medaka
XP_001346140   4 GLCVCALLAALs-TSSCLSLPVH----------------------SEDg-VQSnvgsatGHTRHT-RA----APpagQI- 53  zebrafish
XP_006635590   4 GICVCVLLAVL--STSCLGRPAS---------------------GSEDEgTPAqlgqslSAPRRTaRS----APphgQP- 55  spotted gar
XP_005812244   4 GLCVCAVLAVL--CSSCFGLPFSpkpadedqryFSVPS--EAVF-EADApTLGe-----THLRHS-RS----SP---QL- 64  southern platyfish
XP_002665661   4 GVCVCVILAALsvSVSCASRPVS------------------------DE-RSL------SARRLA-RS----ASltlQQ- 46  zebrafish
2_pfamImport   2 KVCVSLLVAVL--ATACLARSVA-------------------------------------NSRRLdRAsvhsDAsgrAVs 42 
OCA31492       4 GICICLLLAVL--SVSSKAHETT----------GSLSD--DAVGTEMDQlNLS------QFPRYA-RA-----SsagQK- 56  tropical clawed...
XP_006013099   4 GICICMFLAVL--SMGCFGQQTT----------GSNND--SLMAGDTEQ-RFT------THERHV-RA----APssgQL- 56  coelacanth
XP_029700990   4 GLCVCVVLAVL--CTGCFGLPFSsqlleegqrsAPPPS--EAVLFKADSqRLEe-----SHVQHR-RS----AP---QL- 65  torafugu
XP_023820364   4 GIYVCVILAAL--FTGSLTLPSK----------SMRTErkALVTESLPV-PLT------NHTRQA-RSa--pAPpsgQL- 60  Japanese medaka
XP_004073921  66 -KDLPGAEE-DG---DSRANLSELLARLISTRK--GSVRRNSSANNrGGVLRANHRIADRDYLGWMDFGRRSAEEYEYSS 138 Japanese medaka
XP_001346140  54 -NLLTKPED-DE---EPRSSLTELLARIISTK---GSYRRSPAANSrTMG--ASHRIKDRDYLGWMDFGRRSAEEYEYSS 123 zebrafish
XP_006635590  56 -QPFQRAEEaA----EQRASLGELLARLLNRK---GSFRRNSTANSkASGLSANHRIKDRDYLGWMDFGRRSAEEYEYSS 127 spotted gar
XP_005812244  65 -KPFSQTEE-DA---DSRANLSELLARLISSRK--GSVRRNSMAQKkG-GLDTKHRIADRDYIGWMDFGRRSAEEFEYAS 136 southern platyfish
XP_002665661  47 -PLPPAGDI-QP---DTRANLSQLLAKLISSKK--GSVRRNSSMNSrANS--VNHRIKDRDYVGWMDFGRRSAEEYEYSS 117 zebrafish
2_pfamImport  43 hSGMVRRDAmGSltpEQRHFVSKFLPQMYAELSngGGFWKG----------DSMHPVHDRDYDGWMDFGRRSAEDLE--E 110
OCA31492      57 -KSFQRADG------DQRSNIGNVLVKYLQQSRkaGPSGRYVVLPN-RPVFDQPHRINDRDYMGWMDFGRRSAEEYEYSS 128 tropical clawed...
XP_006013099  57 -KPFPKLEG-NP---DQRANLGALLTKYLQQARr-GSSGRYALLGSkAQNLDSNHRINDRDYMGWMDFGRRSAEEYEYSS 130 coelacanth
XP_029700990  66 -KALPLSEE-NP---DSRANLSELLARLISTRK--GSVRRNSAANNrGVGLSANHRIADRDYLGWMDFGRRSAEEYEYSS 138 torafugu
XP_023820364  61 -QSE-----------SAQNSLSQLLARLLSRKS--SSLQTRSSLTSrAAA--PSHRIKDRDYLGWMDFGRRSVEEYEY-S 123 Japanese medaka
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