Conserved Protein Domain Family
cwf21_SRRM2-like

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cd21373: cwf21_SRRM2-like 
cwf21 domain found in serine/arginine repetitive matrix proteins, SRRM2, SRRM3 and similar proteins
This subfamily includes SRRM2 and SRRM3, both of which contain a cwf21 domain at the N-terminus. SRRM2, also called 300 kDa nuclear matrix antigen, serine/arginine-rich splicing factor-related nuclear matrix protein of 300 kDa, SR-related nuclear matrix protein of 300 kDa, Ser/Arg-related nuclear matrix protein of 300 kDa, splicing coactivator subunit SRm300, or Tax-responsive enhancer element-binding protein 803 (TaxREB803), is required for pre-mRNA splicing as component of the spliceosome. SRRM3 may play a role in regulating breast cancer cell invasiveness. It may be involved in RYBP-mediated breast cancer progression. The cwf21 domain is involved in mRNA splicing; it binds directly to the spliceosomal protein Prp8.
Statistics
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PSSM-Id: 410600
Aligned: 36 rows
Threshold Bit Score: 47.1843
Created: 10-Feb-2020
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q9UQ35         53 PNPDILDHERKRRVELRCLELEEMMEEQGYEEQQIQEKVATFRLMLLEKD 102  human
AAH71371       55 PNADILEHQRKRQLEVKCAELQDMMEEQGYSAEEIEEKVNTFRLMLQERQ 104  zebrafish
XP_027232642   52 PNAEIREHARKRALELKCAEMEDVMREQGYSESEVEQKVGQFRAMLMERD 101  Streptococcus pneumoniae
A6NNA2         50 AHREILDHERKRRVELKCMELQEMMEEQGYSEEEIRQKVGTFRQMLMEKE 99   human
RMX44320        6 PNQEILEHERKRQIELKCIELQEVMEEQGYNDSEIETKVEELRCILSEQS 55   Pocillopora damicornis
EEC11993       80 ANQEILDHERKRKLEIKCLELQEMMEEQGYNQEEIDSKVDELRQMLQQQA 129  black-legged tick
TGZ73870       76 PNKEILEHERKRKIEVKCFELEQLMEEQGYMQSEITRKVSAFRASLLEEL 125  Opisthorchis felineus
XP_001639492   52 PNKEILEHQKKREVELKCMELQDMMEEQGYDDAEVQLKVTQLRAFLTEEA 101  starlet sea anemone
VEL09112       54 PNKDILLHERKRKIESKCLELCKNMEDQGYNDEEIQEKVSSYRRLLLNQL 103  Protopolystoma xenopodis
OAF67976       51 PNKDILIHEKKRKIESKCLEYEEQMEEQGYSEDHIQTKLVSFRKLLEEDD 100  Intoshia linei
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