Conserved Protein Domain Family
ERbeta_N

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pfam12497: ERbeta_N 
Estrogen receptor beta
This domain family is found in eukaryotes, and is approximately 110 amino acids in length. The family is found in association with pfam00104, pfam00105. There is a conserved IPS sequence motif. There are two completely conserved residues (Y and W) that may be functionally important. ERbeta binds estrogens with an affinity similar to that of ERalpha, and activates expression of reporter genes containing estrogen response elements in an estrogen-dependent manner. ERbeta acts as a transcription factor once bound to its ligand and it can dimerize with ERalpha.
Statistics
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PSSM-Id: 463610
Aligned: 15 rows
Threshold Bit Score: 142.612
Created: 24-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_007659411  36 CP-APYGCGRSSGPPEHSPLYIPPPYSESHHGCSTTAFYSP-IVMSFNTASSGSDLDGGTVRPAASPGISWPTPGHVSP- 112
XP_017204881  31 SP-ASYNCSQSVLPLEHGPLYVPSSYVEDHHEYPAMTFYSP-AMMNYSVPSGASEADRGPGRQPTSPDVLWPTPGHLSP- 107
NP_001296408  32 SP-ASYNCSQSILPLEHRPICIPSSYVESHHEYSAMTFYSP-AVMNYSIPSSANSSEGGPGQQTTSPNVLWPTPGHLSP- 108
XP_005986456  36 SP-VPYSGNLSTLPVEPRKICITSPYLENRHDFTTMAFYSP-AILGYNVPAGVGESDNMAVSQSLSPTMLWPPAGHISP- 112
XP_006632252  33 TP-AHYSSALPALAVERHPVCIPSPYMERSHDYTAVAFYSP-TLLGYNGHSNGSLPESPTVRQSLSPSMFWPAPSHVSS- 109
Q9YH32        28 SP-ILGSSSPGLSHETSQPICIRSPYTDLGHDFTTIPFYSP-TIFSYGGPS---ISECSSVHQSLSASLFWPSHGRVGTp 102 Nile tilapia
OCA26300      34 SS-VPYS---GTVPMDQSPMYTPSSYLDSRHDYPSITFCSP-SLINYNVPG--SDSESSVLRQTVSPGLLWTSPDHMSP- 105
XP_016846689  37 SPaIPFSCSPSALTVEHSPIYIPSSYMENRHDYSAMAFYTPaAMMNYNIPGNFSDSESTALRQTASPSMLWSGPGHISP- 115
XP_002200631  36 SP-VPYNCNQSTLTAEHSPLYIPSSFMENRHEYSTMAFCSP-AMVNYNIGSNFGDAEGVTARQTSSPSALWAAPGHLSP- 112
XP_010710318  36 SP-VPYSCNQSALTTEHSPIYIPSSYVENRHEYSAMAFCSP-AMMNYNIASNFGDSESASVRQTSSPSVLWSAPGHLSP- 112
XP_007659411 113 LPLHC-PSSLIYAESQRSSWCEARLTEPVLPlPKLE 147
XP_017204881 108 LAIRC-QSSLLYPEPQKPSWCEVRPLEHTSP-VNRE 141
NP_001296408 109 VAIRH-PSSLLYTETQKSPWCEARSLEHALS-VNRE 142
XP_005986456 113 MALHC-QPSLMYAEPSKDPWSEDRLIEQNLSlNSRG 147
XP_006632252 110 LAIHC-QQSLMYSEPPRSPWSEPQPREPVMVeNSKL 144
Q9YH32       103 ITLHCpQGRSQQGQSAQTPWDSVIT-------TSKS 131 Nile tilapia
OCA26300     106 VTLHC-QSSLLYTEAPTSPWFEAKSEEHILP-LSRE 139
XP_016846689 116 LTLHC-QSSVLYAEQPKSPWCEARPMDHVLP-MHRE 149
XP_002200631 113 LSLHC-QSSLLYPEQPKSLWCEARPMEPVLP-GSRE 146
XP_010710318 113 LTLHC-QSSLLYAEQPKSPWCEVRPLEPVLP-ITRE 146
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