2CO9


Conserved Protein Domain Family
HMG-box_TOX-like

?
cd21995: HMG-box_TOX-like 
Click on image for an interactive view with Cn3D
high mobility group (HMG)-box found in the TOX high mobility group box family
The TOX family includes four members: TOX, TOX2, TOX3 and TOX4. TOX, also called thymus high mobility group box protein TOX, is a transcriptional regulator with a major role in neural stem cell commitment and corticogenesis as well as in lymphoid cell development and lymphoid tissue organogenesis. It binds to GC-rich DNA sequences in the proximity of transcription start sites and may alter chromatin structure, modifying access of transcription factors to DNA. TOX2, also called granulosa cell HMG box protein 1 (GCX-1), is a putative transcriptional activator involved in the hypothalamic-pituitary-gonadal system. TOX3, also called CAG trinucleotide repeat-containing gene F9 protein (CAGF9), or trinucleotide repeat-containing gene 9 protein (TNRC9), is a transcriptional coactivator of the p300/CBP-mediated transcription complex. It activates transactivation through cAMP response element (CRE) sites. It protects against cell death by inducing anti-apoptotic and repressing pro-apoptotic transcripts. TOX4, also called epidermal Langerhans cell protein LCP1, is a component of the PTW/PP1 phosphatase complex, which plays a role in the control of chromatin structure and cell cycle progression during the transition from mitosis into interphase. All family members contain one HMG-box domain.
Statistics
?
PSSM-Id: 438811
Aligned: 41 rows
Threshold Bit Score: 111.414
Created: 8-Apr-2019
Updated: 17-Oct-2022
Structure
?
Program:
Drawing:
Aligned Rows:
 
putative DNA
Conserved site includes 20 residues -Click on image for an interactive view with Cn3D
Feature 1:putative DNA binding site [nucleic acid binding site]
Evidence:

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Feature 1        ## #####  ##      #           ##  #  ##      #   #  #   #  #          
2CO9_A        19 QKPVSAYALFFRDTQAAIKGQNPNaTFGEVSKIVASMWDGLGeEQKQVYKKKTEAAKKEYLKQLAAYRAS 88  house mouse
PIK62639      54 QKPVSAYALFFRDTQAAIKGSNPNaSFGEVSKIVASMWDSLEaEQKQAYKQKTETAKREYLKKLAAYRAS 123 Japanese sea cucumber
NP_001072029  38 QKPVSAYALFFRDTQAAIKADNPSaTFGEISKIVASMWDSLSeEAKQIYKMKTETAKRDYLKQLAAYRAN 107 vase tunicate
XP_013392522 300 QKPVSAYALFFRDTQAAIKGQNPSaTFGEISKIVASMWDNLDpDSKNVYKQRTETAKKEYLKLLAAYRAT 369 Lingula anatina
XP_009029253  17 QKPVSAYSLFFRNAQAAIKTQNPSaTFGDVSKIVASMWDGLDdDIKNYYKRQMEMAKKEYLKQLAIYRST 86  Helobdella robusta
EFX60405      19 QKPVSAYALFFRDTQAAIKGQNPNaSFGEVSKIVASMWDALDaDSKNVYKKKTEAAKKEYLKALAAYRAS 88  common water flea
PAA91162     210 QKPVSAYAMFFRDTQSKIKAKKPDaSFGEISKLVASMWDNLDqEDKNDYKKRTETAKKEYLRKLAAYKAR 279 Macrostomum lignano
RZF40532     295 QKPVSAYALFFRDTQAAIKGQNPNaSFGEVSKIVASMWDSLDaEHKNVYKKKTEAAKKDYLKALAAYRAS 364 small brown planthopper
XP_023333070 198 QKPVSAYALFFRDSQASIKGRNPNlTFGDVSKMVASLWDSLDsESKALYKKRTEMAKKEYLRQLASYRAS 267 Eurytemora affinis
KZC05439     339 QKPVSAYALFFRDTQAAIKGQNPNaSFGEVSKIVASMWDALEtEHKNVYKKKTEAAKKEYLQALAAYRAS 408 Dufourea novaeangliae

| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap