1E07,1E07


Conserved Protein Domain Family
IgC2_CEACAM5-like

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cd20948: IgC2_CEACAM5-like 
Fifth immunoglobulin (Ig)-like domain of the carcinoembryonic antigen (CEA) related cell adhesion molecule 5 (CEACAM5) and similar domains; member of the C2-set IgSF domains
The members here are composed of the fifth immunoglobulin (Ig)-like domain of the carcinoembryonic antigen (CEA) related cell adhesion molecule 5 (CEACAM5) and similar domains. The CEA family is a group of anchored or secreted glycoproteins, expressed by epithelial cells, leukocytes, endothelial cells and placenta. The CEA family is divided into the CEACAM and pregnancy-specific glycoprotein (PSG) subfamilies. Carcinoembryonic antigen-related cell adhesion molecule 5 (CEACAM5), also known as CD66e (Cluster of Differentiation 66e), is a cell surface glycoprotein that plays a role in cell adhesion, intracellular signaling and tumor progression. Diseases associated with CEACAM5 include lung cancer and rectum cancer. IgSF domains can be divided into 4 main classes based on their structures and sequences: the Variable (V), Constant 1 (C1), Constant 2 (C2), and Intermediate (I) sets. This group belongs to the C2-set of IgSF domains, having A, B, and E strands in one beta-sheet and A', G, F, C' in the other. Unlike other Ig domain sets, the C2-set lacks the D strand.
Statistics
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PSSM-Id: 409540
Aligned: 10 rows
Threshold Bit Score: 84.4712
Created: 17-Sep-2019
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
  next features
Conserved site includes 7 residues -Click on image for an interactive view with Cn3D
Feature 1:Ig strand A [structural motif]
Evidence:
  • None

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1        #######                                                                         
1E07_A       565 SPPDSSYLSGANLNLSCHSasnpsPQYSWRIngIPQQHTq--------------------------vLFIAKITPNNNGT 618 human
1E07_A       209 SPLNTSYRSGENLNLSCHAasnppAQYSWFVngTFQQSTq--------------------------eLFIPNITVNNSGS 262 human
P06731       243 SPLNTSYRSGENLNLSCHAasnppAQYSWFVngTFQQSTq--------------------------eLFIPNITVNNSGS 296 human
P16573       243 SPPDIYLHQGSNLNLSCHAdsnppAQYFWLIneKLQTSSq--------------------------eLFISNITTNNSGT 296 Norway rat
Q00887       338 YPSFTYYRSGENLDLSCFTesnppAEYFWTIngKFQQSGq--------------------------kLFIPQITRNHSGL 391 human
AAL13251      21 GVNVTVRESLGELVLECKGa----TNAEWNT--GGRNLE----------------------------VNLGALTRDPRGT 66  Iberian ribbed ...
P04216        22 VTSLTACLVDQSLRLDCRHentssSPIQYEFslTRETKKhvlfgtvgvpehtyrsrtnftskynmkvLYLSAFTSKDEGT 101 human
Q15238       245 YPSFTYYRSGENLYLSCFAesnppAEYFWTIngKFQQSGq--------------------------kLSIPQITTKHRGL 298 human
XP_001378380 252 EGTPLLILEGESLKLDCAAasnppATLSWSLgdRNLTSLqtsyp-------------------gvlsLEMTSLREEDGGE 312 gray short-tail...
XP_001518834 267 TSSSLTALEGESLRLICSSkgnppADLRWTWkgRVLSLSrprdp-------------------gvleLLLPYLGEENEGE 327 platypus
Feature 1                              
1E07_A       619 YACFVSNLATGRNNSIVKSITV 640 human
1E07_A       263 YTCQAHNSDTGLNRTTVTTITV 284 human
P06731       297 YTCQAHNSDTGLNRTTVTTITV 318 human
P16573       297 YACFVNNTVTGLSRTTVKNITV 318 Norway rat
Q00887       392 YACSVHNSATGKEISKSMTVKV 413 human
AAL13251      67 YSCSEHGNPQSKDTLQVYVRMC 88  Iberian ribbed newt
P04216       102 YTCALHHSGHSPPISSQNVTVL 123 human
Q15238       299 YTCSVRNSATGKESSKSMTVEV 320 human
XP_001378380 313 YMCQAHNRLGAQNLSLYLSVQS 334 gray short-tailed opossum
XP_001518834 328 YTCHAQNPLGTRNVSLNLSVQY 349 platypus

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