2WO3,3CZU,1SHX


Conserved Protein Domain Family
Ephrin-A_Ectodomain

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cd10425: Ephrin-A_Ectodomain 
Click on image for an interactive view with Cn3D
Ectodomain of Ephrin A
Ephrins and their receptors EphR play an important role in cell communication in normal physiology, as well as in disease pathogenesis. Binding of the ephrin (Eph) ligand to EphR requires cell-cell contact, since both molecules are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling, depending on Eph kinase activity) and ephrin-expressing cells (reverse signaling). Eph signaling controls cell morphology, adhesion, migration and invasion. Ephrins can be subdivided into 2 groups, A and B, depending on their respective receptors EphA or EphB. The nine human EphA receptors bind to five GPI-linked ephrin-A ligands. Interactions are promiscuous within each class, and some Eph receptors can also bind to ephrins of the other class. All ephrin As contain a highly conserved receptor binding ectodomain described by this model. Although ephrin As do not have a cytoplasmic tail (in contrast to ephrin Bs), they are still capable of downstream activation of Src family kinases and phosphoinositide-3-kinases, most likely involving coreceptors such as neurotrophin receptors.
Statistics
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PSSM-Id: 259896
Aligned: 17 rows
Threshold Bit Score: 169.799
Created: 13-Jun-2011
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
receptor
Conserved site includes 16 residues -Click on image for an interactive view with Cn3D
Feature 1:receptor binding site [polypeptide binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                         #                                              
2WO3_B         6 DRYAVYWNRSNPRFHAgagddgGGYTVEVSINDYLDIYCPHYGaplp-------paerMEHYVLYMVNGEGHASCDhr-q 77  human
3CZU_B        30 DRHTVFWNSSNPKFRN------EDYTIHVQLNDYVDIICPHYEdhsv-------adaaMEQYILYLVEHEEYQLCQpq-s 95  human
P52797        31 NRHAVYWNSSNQHLRR------EGYTVQVNVNDYLDIYCPHYNssgvgpgagpgpgggAEQYVLYMVSRNGYRTCNas-- 102 human
O08542        26 LRHPIYWNSSNPRLLR------GDAVVELGFNDYLDIFCPHYEspgp--------pegPETFALYMVDWSGYEACTaega 91  house mouse
O93431        21 ERHSVYWNSTNANFLW------DDYTVDVRINDYLDIICPHYAhgei-------asqeAERYVLYMVELEDYENCKph-s 86  zebrafish
P52794        29 ERHIVFWNSSNYRFMQ------EDYTVQVQLNDYLDIVCPYYEegsv-------aghtVERYTLFLVDYEEYETCKpk-s 94  African clawed ...
NP_001080496  21 NRHSVYWNSSNYHLRR------DGYTVQVDVNDYLDIYCPHYNesvv--------ehkMEQYILYMVSYEGYRTCNis-- 84  African clawed ...
NP_571929     24 ARHAVHWNSSNILLRK------EGYTLQVNVNDYLDIYCPHYNssq---------rgiAEQYVLYMVSYRGYRTCDpq-- 86  zebrafish
XP_001343018  28 KRHVVYWNSTNTRLTG------DDYSVQVNLSDYLDILCPHYPgdhp-------sgasVETLALYLVAESQFRGCVdt-k 93  zebrafish
NP_001028177  23 TRHVVFWDRSINSSLT------TELRLQVQINEWMDILCPKPArnde-------krgeELYIDVFNVTAAQYHRCNtq-- 87  Ciona intestinalis
Feature 1          #####           ##      ###### ##                                    
2WO3_B        78 rGFKRWECNRPAApggPLKFSEKFQLFTPFSLGFEFRPGHEYYYISATPPn-aVDRPC-----LRLKVYVR 142 human
3CZU_B        96 kDQVRWQCNRPSAkhgPEKLSEKFQRFTPFTLGKEFKEGHSYYYISKPIHq--HEDRC-----LRLKVTVS 159 human
P52797       103 qGFKRWECNRPHAphsPIKFSEKFQRYSAFSLGYEFHAGHEYYYISTPTHn--LHWKC-----LRMKVFVC 166 human
O08542        92 nAFQRWNCSMPFApfsPVRFSEKIQRYTPFPLGFEFLPGETYYYISVPTPe--SPGRC-----LRLQVSVC 155 house mouse
O93431        87 fDQLRWECSRPFAphaPEKFSEKFQRFTPFTLGKEFRQGESYYYISKPLHh--HGQEC-----LRLKVDVV 150 zebrafish
P52794        95 kDQVRWECNKPFAphgPEKFCEKFQKFTPFTLGTEFREGRTYYYISKPIHy--HGETC-----MRLRVHVS 158 African clawed frog
NP_001080496  85 qGFKRWECNRPHVphsPIKFSEKFQRYSAFSLGYEFHAGHEYYYISTPTHn--HRRSC-----LKMKVFVC 148 African clawed frog
NP_571929     87 lGFKRWECNRPHAphaPIKFSEKFQRYSAFSLGYEFHVGQEYYYISTPTHh--HGRSC-----LRLRVYVC 150 zebrafish
XP_001343018  94 eAIKRWECNQPFApfgPVRFSEKIQRFTPFSLGFEFLPGHHYYYSCNCGSlfaVRRQQldhldKKPQKHHH 164 zebrafish
NP_001028177  88 kIQRVLRCSDPKR---EIKLTTKFQERSPSPLGFVFRPGQSYYYISKPSKg--GTRGCst-dtLRLVVEVE 152 Ciona intestinalis

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