1URT,1KEQ


Conserved Protein Domain Family
alpha_CA_V

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cd03118: alpha_CA_V 
Click on image for an interactive view with Cn3D
Carbonic anhydrase alpha, CA isozyme V_like subgroup. Carbonic anhydrases (CAs) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism: a nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide, followed by the regeneration of the active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. They are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. Most alpha CAs are monomeric enzymes. The zinc ion is complexed by three histidines. This vertebrate subgroup comprises isozyme V. CA V is the mitochondrial isozyme, which may play a role in gluconeogenesis and ureagenesis and possibly also in lipogenesis.
Statistics
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PSSM-Id: 239392
Aligned: 6 rows
Threshold Bit Score: 487.429
Created: 1-Nov-2005
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
active sitezinc binding
Conserved site includes 7 residues -Click on image for an interactive view with Cn3D
Feature 1:active site [active site]
Evidence:
  • Comment:zinc binding histidines and other residues found to be important for enzymatic activity
  • Structure:1URT, Murine Carbonic Anhydrase V, bound with zinc, contacts at 3.5 A.
    View structure with Cn3D
  • Citation:PMID 7479916

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                            #                           # # #        
1URT        4 GTRQSPINIQwkDSVYDPqLAPLRVSYdaascrYLWNTGHAFQVEFDDscedSGISGGPLGNHYRLKQFHFHWGatdeWG 83  house mouse
AAB47048   61 GTRQSPINIQwrDSVYDPqLKPLRVSYeaasclYIWNTGYLFQVEFDDateaSGISGGPLENHYRLKQFHFHWGavneGG 140 human
1KEQ_A      4 GTRQSPINIQwkDSVYDPqLAPLRVSYdaascrYLWNTGYAFQVEFDDscedSGISGGPLGNHYRLKQFHFHWGatdeWG 83  house mouse
XP_414195  58 GTRQSPINIQwrDSVYDPvLKPLKISYdpatclHIWNNGYSFLVEFDDsadrSIIVGGPLENQYRLKQFHFHWGaineWG 137 chicken
AAH68819   63 GSRQSPINIRirDSVFHPqLAPVHTQYdpntclHIWNNGYSFFVEFDDstdkSIVSGGPLENPFRLKQFHFHWGrnndWG 142 African clawed frog
XP_698504  62 GDRQSPIDIEvrKSIFNPqLRPLKVQYdprtcqQIWNNGYSFLVEYDDttdkSTVKGGPLENQYRLCQFHFHWGennnWG 141 zebrafish
Feature 1      #            #                                                                 
1URT       84 SEHAVDGHTyPAELHLVHWNstkyenykkasvgeNGLAVIGVFLKLGaHHQALQKLVDVLPevrhKDTQVAMGDFDPSCL 163 house mouse
AAB47048  141 SEHTVDGHAyPAELHLVHWNsvkyqnykeavvgeNGLAVIGVFLKLGaHHQTLQRLVDILPeikhKDARAAMRPFDPSTL 220 human
1KEQ_A     84 SEHAVDGHTyPAELHLVHWNstkyenckkasvgeNGLAVIGVFLKLGaHHQALQKLVDVLPevrhKDTQVAMGPFDPSCL 163 house mouse
XP_414195 138 SEHTVDSKFyPAELHLVHWNavvyptfeeavmegDGLAVIGVFLKLGaHHEGLQTLVDALPaikhKDTVIEFDVFDPSCL 217 chicken
AAH68819  143 SEHTVDSRVfPAELHLVHWNcskyrtfeeaimepNGLAVIGVFLKIGkQHEKLQKLVDILPsvryKDALTEFNYFDASCL 222 African clawed frog
XP_698504 142 SEHSIDRRLyAAELHIVHWNsdkyslfeeavmeeNGLAVIGVFLKVGkRHEGLQKLVDALPavrhKDSVVEFNKFDPSCL 221 zebrafish
Feature 1                    #                                                              
1URT      164 MPAc-rDYWTYPGSLTTPPLAESVTWIVQKTPVEVSPSQLSMFRTLLFsgrge-eedvMVNNYRPLQPLRDRKLRSSF 239 house mouse
AAB47048  221 LPTc-wDYWTYAGSLTTPPLTESVTWIIQKEPVEVAPSQLSAFRTLLFsalge-eekmMVNNYRPLQPLMNRKVWASF 296 human
1KEQ_A    164 MPAc-rDYWTYPGSLTTPPLAESVTWIVQKTPVEVSPSQLSMFRTLLFsgrge-eedvMVNNYRPLQPLRDRKLRSSF 239 house mouse
XP_414195 218 LPPc-pDYWTYAGSLTTPPLTESVTWIIKKQPIEVDENQLEAFRMLLFtsdge-eekrMVDNFRPLQPLMNRTVRSSF 293 chicken
AAH68819  223 LPSc-vDYWTYSGSLTTPPLTESVTWIIMKKPIEVDHSQLAVFRSLLFtavge-eekyMVDNFRPLQPIMNRTVHSSF 298 African clawed frog
XP_698504 222 LPEnisDYWTYPGSLTTPPLTEAVTWIVMKQHIEVSHDQLAVFRSLLFtsaeeqvqrsMVNNFRVQQDLKGRAVHSSF 299 zebrafish

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