Conserved Protein Domain Family
Peptidase_C19D

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cd02660: Peptidase_C19D 
A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin. The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome.
Statistics
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PSSM-Id: 239125
Aligned: 16 rows
Threshold Bit Score: 410.225
Created: 22-Apr-2005
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
Active Site
Feature 1:Active Site [active site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1         #    #                                                                      
EAK82087  303 RGLRNMGATCYMNVIIQAFLHNPLLRNYFLsdrhna-------------------------------------------- 338 Ustilago maydis 521
CAG81946  147 RGLVNMGATCFMSVIVQTLIHNPLIRNDFLaqnhslglcalkraiadgtitysdfcdyyeelpetiqresrdlplstlit 226 Yarrowia lipolytic...
AAG42760  177 RGLNNLGSTCFMNAVLQALVHAPPLRNFWLsgqhnrdl------------------------------------------ 214 thale cress
XP_452509 133 QGLVNMGSTCFMSSIIQTIIHNPYFVEDLLshkhcnn------------------------------------------- 169 Kluyveromyces lact...
AAD53181  397 RGLLNLGATCFMNCIVQALVHTPLLSDYFMsdrhdc-------------------------------------------- 432 fruit fly
P50102    137 SGLINMGSTCFMSSILQCLIHNPYFIRHSMsqihsnn------------------------------------------- 173 baker's yeast
AAS53922  137 LGLVNMGSTCFMSSVIQTFLHLPHVLQYMLerlhyat------------------------------------------- 173 Ashbya gossypii AT...
CAG86308  200 KGFINLGSTCFMSCILQTLIHNPIIKYQFFnndlhyfncehn------------------------------------yd 243 Debaryomyces hanse...
AAW44367  212 RPLLNLSQTCFLSAVLQALVHNPLLKAYFLsdkhnrhvctnggkgllvg-----------------------kpflgven 268 Cryptococcus neofo...
Q09738    145 RGIQNLGATCFMSVILQSILHNPLVRNLFFsgfhtstdckrpt----------------------------------cmt 190 fission yeast
Feature 1                                                                                     
EAK82087  339 ----slcngaKTCLACEMdkifsefyssdpgalaaglgtgtgttgpgasattvadamvraasqngtnipaakgPHGPISF 414 Ustilago maydis 521
CAG81946  227 wanatlspnpNNCIACALddcfskf-----------------------------------------yasatvqGYGPVSL 265 Yarrowia lipolytic...
AAG42760  215 ---cprrtmgLLCLPCDLdiifsam------------------------------------------fsgdrtPYSPAHL 249 thale cress
XP_452509 170 ----cdiksgTKCVSCALdeiacdfygn-----------------------------------gpgtgksssvSKGFVNL 210 Kluyveromyces lact...
AAD53181  433 -----gskssHKCLVCEVsrlfqef------------------------------------------ysgsrsPLSLHRL 465 fruit fly
P50102    174 ----ckvrspDKCFSCALdkivhelygalnt------------------------------kqasssststnrQTGFIYL 219 baker's yeast
AAS53922  174 ----cdvqdsLSCISCAVdeivanlygqvkeeaasg-------------------vagpgastqalsqslskqQQGFINL 230 Ashbya gossypii AT...
CAG86308  244 ystngviteqNACITCSIdnifknf-----------------------------------------ftsddteGFGMTNL 282 Debaryomyces hanse...
AAW44367  269 gpgavgsdreRGCMCCEMdkafeef------------------------------------------ynedksPFGPITM 306 Cryptococcus neofo...
Q09738    191 caiddmfssiYNSKNKST-------------------------------------------------------FYGPTAV 215 fission yeast
Feature 1                                                                                     
EAK82087  415 LYCVWVDQasseLGQAGQHDAHELFISALNSIHtaltsrapersslpwfayehsdalnllfdhyegssgsgnqseeegmg 494 Ustilago maydis 521
CAG81946  266 MISSWNINr--qLAGYSQQDAHEFWQFLVNELHgsslvrveegldedrgassdipv-----------------------q 320 Yarrowia lipolytic...
AAG42760  250 LYSWWQHSt--nLATYEQQDSHEFFISLLDRIHenegkskcl-------------------------------------- 289 thale cress
XP_452509 211 LSASWHINh--hLVGSSQQDAHEYWQFLLNQLHtdharvfg--------------------------------------- 249 Kluyveromyces lact...
AAD53181  466 LHLIWNHAk--hLAGYEQQDAHEFFIATLDVLHrhcvkakaehesksnssgs---------------------------- 515 fruit fly
P50102    220 LTCAWKINq--nLAGYSQQDAHEFWQFIINQIHqsyvldlpnak------------------------------------ 261 baker's yeast
AAS53922  231 LTCSWKINr--nLAGYSQQDAHEFWQFLLNQLHtdyirihgp-------------------------------------- 270 Ashbya gossypii AT...
CAG86308  283 LMTSWFKKk--sLAGSQEQDAHEFWQFLLNEFHqdylrvsnk-------------------------------------- 322 Debaryomyces hanse...
AAW44367  307 LYAMWHASt--eLEGYGQQDAHSFFLAALDQIHahakgq----------------------------------------- 343 Cryptococcus neofo...
Q09738    216 LNLMWKLSk--sLCGYSQQDGHEFFVYLLDQMHtesggg----------------------------------------- 252 fission yeast
Feature 1                                                                                     
EAK82087  495 gnggtpmglgargnggvagcpCVVHRTFAGQLQSDVtCQRCGKVNTt-RDPMLDLSLDVRpesmrrkdansvnaignntk 573 Ustilago maydis 521
CAG81946  321 fkntwdsisesgscsdtsdctCISHRTFGGTLQSTAtCNGCSHTSHt-YDPLMDLSLQIPlkg----------------- 382 Yarrowia lipolytic...
AAG42760  290 -------------yqdneecqCITHKAFSGLLRSDVtCTTCGSTSTt-YDPFIDISLTLDsmngfspadcrkn------- 348 thale cress
XP_452509 250 -------------sskapdcqCITHRIFQGYLKNTLqCSQCGFSKTt-IDPIMDLSLEIKnn------------------ 297 Kluyveromyces lact...
AAD53181  516 --gsgtnssnsssshcygqcnCIIDQIFTGMLQSDVvCQACNGVSTt-YDPFWDISLDLGettthg-------------- 578 fruit fly
P50102    262 ----------evsrannkqceCIVHTVFEGSLESSIvCPGCQNNSKttIDPFLDLSLDIKdk------------------ 313 baker's yeast
AAS53922  271 -------------pskksacgCILHMLFQGYLESSIvCSECHGNNKttVDPIMDLSLGIQnk------------------ 319 Ashbya gossypii AT...
CAG86308  323 -------------kfdhdhckCITHTTFSGQLESSIiCAECNSTTRt-TDPMIDLSLEIDhmkrs--------------- 373 Debaryomyces hanse...
AAW44367  344 ----------------lsscnCIAHQTFAGSLQSSViCSKCSKTSNt-VDPILDIQLDFPppsvpssassssds------ 400 Cryptococcus neofo...
Q09738    253 ---------------tsmpctCPIHRIFSGSLKNVVtCLDCKKERVa-VDPLMDISLDINe------------------- 297 fission yeast
Feature 1                                                                                     
EAK82087  574 tkllngkpaavhgngaievqeeqHLTICLQRYCSEEKLGNnd---ysCTGCGGsa--sATKQLSLYRLPPVLCIQLKRFe 648 Ustilago maydis 521
CAG81946  383 ---------------------qaSLSSCLDKYTAPEQMEYf------CENCKShe--sVSKTLALKKPPVVLSFQLKRFq 433 Yarrowia lipolytic...
AAG42760  349 ----------rysggpsvnaimpTLSGCLDFFTRSEKLGPdqk--lnCQSCGEkr--eSSKQMSIRRLPLLLCLHVKRFe 414 thale cress
XP_452509 298 ----------------------pKLEDCLDHFQREETLTDfh---yeCQSCKQnq--gVVKQLTLHKAPNVLVIQLKRFe 350 Kluyveromyces lact...
AAD53181  579 ------------------gvtpkTLIDCLERYTRAEHLGSaak--ikCSTCKSyq--eSTKQFSLRTLPSVVSFHLKRFe 636 fruit fly
P50102    314 ----------------------kKLYECLDSFHKKEQLKDfn---yhCGECNStq--dAIKQLGIHKLPSVLVLQLKRFe 366 baker's yeast
AAS53922  320 ----------------------sTLHECLDSFHRRESLTDfn---ycCKNCMSts--nPIRQLSMAKLPPVLMLQLKRFe 372 Ashbya gossypii AT...
CAG86308  374 -------------------dhllNLYDCLDLFTKEEKLDVmy----kCQHCDNrs--rAKKSLRIKKIPPVLSIQLKRFk 428 Debaryomyces hanse...
AAW44367  401 ---------safgpstngqadqlTLAGMLRKFCAPERVGDpggngyeCSGCGGgvgvvAMRKLGVKKLAPVLSFQLKRFa 471 Cryptococcus neofo...
Q09738    298 ----------------------pTLQGCLERFVSKEKVQYs------CHSCGSk---nAIKQLVFDKLPPTICMQLKRFe 346 fission yeast
Feature 1                                                                                   # 
EAK82087  649 hts---saaKIDTKVRFPLVLdvrqfstaeirapvdelnhgdsatsnkhttllanpdpEAYLYDLFTVVVHEGSmnTGHY 725 Ustilago maydis 521
CAG81946  434 htg--ssssKIDTHVEFPLYLdmspy---------------------------tcsqeSGLVYELYAVVCHHGSlnTGHY 484 Yarrowia lipolytic...
AAG42760  415 hfltrktsrKIDSYLQYPFRLnmspylsssiigkrfgnr--ifafdgegeydssssssPSAEFEIFAVVTHKGMleSGHY 492 thale cress
XP_452509 351 hqln-gqsaKLNDRVQFPLHLnlkphlf-----------------------qiedeyiPNIAYDLLNVVSHQGTvdQGHY 406 Kluyveromyces lact...
AAD53181  637 hsa--lidrKISSFIQFPVEFdmtpfms------------------------ekknayGDFRFSLYAVVNHVGTidTGHY 690 fruit fly
P50102    367 hlln-gsnrKLDDFIEFPTYLnmknycstke-----------------kdkhsengkvPDIIYELIGIVSHKGTvnEGHY 428 baker's yeast
AAS53922  373 hlin-gtsvKINDYIFFSVDLnmkdyckp----------------------mddqhpvPNLTFKLSAIIPHQGTvdKGHY 429 Ashbya gossypii AT...
CAG86308  429 hnlhndtfsKIEIPIDIPLFLnitkytsa----------------------smspeldGDKIFELFALVCHIGSvnTGHY 486 Debaryomyces hanse...
AAW44367  472 hssa-ttsvKIESHVRFPSTLdmrpyvdsssssk------------sgndrkekelpdSLYIYDLFAVVTHEGKldNGHY 538 Cryptococcus neofo...
Q09738    347 qnnf-amstKIDKQVSYPAFLrmry-----------------------------nfnqDDVDYQLYSVVCHKGTldTGHY 396 fission yeast
Feature 1                    #                      
EAK82087  726 TNFSKwr-gsWYRFDDDKVHATSEAQVLQARAYQLCYK 762 Ustilago maydis 521
CAG81946  485 TCMVKgrdmhWYNFDDVTITRVDVQQVLAARAYLLFYI 522 Yarrowia lipolytica CLIB99
AAG42760  493 VTYLRlk-glWYRCDDAWINEVEEEVVRGCECYMLFYA 529 thale cress
XP_452509 407 TTVSKtedgqWFKFNDSVVTSVTEEQVLEQQAYLLFYI 444 Kluyveromyces lactis NRRL Y-1140
AAD53181  691 TAYVRhqkdtWVKCDDHVITMASLKQVLDSEGYLLFYH 728 fruit fly
P50102    429 IAFCKisggqWFKFNDSMVSSISQEEVLKEQAYLLFYT 466 baker's yeast
AAS53922  430 TTICRingdvWAKFNDSMVTLISEEDMLKEQAYLLYYV 467 Ashbya gossypii ATCC 10895
CAG86308  487 IVIIKngngqWLKFDDSVISLISQEEVVKANAYLLFYI 524 Debaryomyces hansenii CBS767
AAW44367  539 WADVRdg-eeWWHCDDDKVTPTSLSAVLAQRAYMLFYV 575 Cryptococcus neoformans var. neoformans JEC21
Q09738    397 IAYTYyq-nqWFLLDDTTIVEVKESEVLNSQAYLLFYH 433 fission yeast

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