6DHB,4QYC,5F71,2OYP,2OR7,2OR8


Conserved Protein Domain Family
IgV_TIM-3_like

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cd20982: IgV_TIM-3_like 
Click on image for an interactive view with Cn3D
Immunoglobulin Variable (IgV) domain of T cell Immunoglobulin Domain and Mucin Domain 3 (Tim-3), and similar domains
The members here are composed of the immunoglobulin variable (IgV) domain of T cell immunoglobulin domain and mucin domain 3 (Tim-3; also known as Hepatitis A virus cellular receptor 2 (HAVcr-2) and Cluster of Differentiation 366 (CD366)) and similar proteins. TIM-3 is a checkpoint inhibitor in immune responses to tumors, as well as involved in chronic viral infections. Thus, Tim-3 has emerged as one of most promising immune checkpoint targets for cancer immunotherapy. Tim-3 is highly expressed on Th1 lymphocytes and CD11b(+) macrophages and is upregulated on activated T and myeloid cells. TIM-3 regulates macrophage, activation and inhibits Th1 mediated immune responses to promote immunological tolerance. There are three TIM family members in humans (TIM-1, TIM-3, and TIM-4) and eight members in mice (TIM-1 to TIM-8). The IgV domain of human TIM-3 has been shown to bind ligands such as carcinoembryonic antigen cell adhesion molecule 1 (CEACAM1), high mobility group protein B1 (HMGB1)and galectin-9 (GAL9). The binding of GAL9 to TIM-3 can negatively regulate Th1 immune response, enhance immune tolerance and inhibit anti#tumor immunity. Dysregulation of the TIM-3/GAL9 pathway is implicated in numerous chronic autoimmune diseases, such as multiple sclerosis and systemic lupus erythematosus.
Statistics
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PSSM-Id: 409574
Aligned: 12 rows
Threshold Bit Score: 184.199
Created: 4-Nov-2019
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
  next features
Conserved site includes 5 residues -Click on image for an interactive view with Cn3D
Feature 1:Ig strand A [structural motif]
Evidence:
  • None

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1        #####                                                                           
6DHB_A         2 VEYRAEVGQNAYLPCFYTPAApgnLVPVCWGKGACPVFECGNVVLRTDERDVNYWTS-RYWLNGDFRKGDVSLTIENVTL 80  human
4QYC_A       128 VEYRAEVGQNAYLPCFYTPAApgnLVPVCWGKGACPVFECGNVVLRTDERDVNYWTS-RYWLNGDFRKGDVSLTIENVTL 206 human
5F71_A         3 VEYRAEVGQNAYLPCFYTPAApgnLVPVCWGKGACPVFECGNVVLRTDERDVNYWTS-RYWLNGDFRKGDVSLTIENVTL 81  human
BAQ00264       3 VEYIAEVGQNAYLPCSYTPAPpgnLVPVCWGKGACPVFDCSNVVLRTENRDVNDRTSgRYWLKGDFHKGDVSLTIENVTL 82  Macaca mulatta
XP_009448319  24 VEYRAEVGQNAYLPCLYTPAApgnLVPVCWGKGACPVFKCGNVVLSTDERDVNYRTS-RYWLNGDFRKGDVSLTIENVTL 102 Pan troglodytes
2OYP_A         2 DGYKVEVGKNAYLPCSYTLPTsgtLVPMCWGKGFCPWSQCTNELLRTDERNVTYQKSsRYQLKGDLNKGDVSLIIKNVTL 81  house mouse
2OR7_A         5 TAVQGLAGHPVTLPCIYSTHLg-gIVPMCWGLGECRHSYCIRSLIWTNGYTVTHQRNsRYQLKGNISEGNVSLTIENTVV 83  house mouse
2OR8_A         5 VEVKGVVGHPVTLPCTYSTYRg--ITTTCWGRGQCPSSACQNTLIWTNGHRVTYQKSsRYNLKGHISEGDVSLTIENSVE 82  house mouse
CAD79372       3 NAYTAEVGKNAYLPCSYTVPApgtLVPICWGKGSCPLLQCASVVLRTDETNVTYRKSrRYQLKGNFYKGDMSLTIKNVTL 82  Rattus norvegicus
AAS59531      24 NAYVFEVGKNAYLPCSYTLSTpgaLVPMCWGKGFCPWSQCTNELLRTDERNVTYQKSsRYQLKGDLNKGDVSLIIKNVTL 103 Mus musculus
NP_001013877  20 ASYTVVQGHSVTLPCIYSTTYrdeMVPTCWGRGECRSSYCTRSLIWTNGYKVTYQRSnRYQLKGNISEGNVSLTIENTVV 99  Rattus norvegicus
Q8TDQ0        24 VEYRAEVGQNAYLPCFYTPAApgnLVPVCWGKGACPVFECGNVVLRTDERDVNYWTS-RYWLNGDFRKGDVSLTIENVTL 102 human
Feature 1                                   
6DHB_A        81 ADSGIYCCRIQIPGIMNDEKFNLKLVI 107 human
4QYC_A       207 ADSGIYCCRIQIPGIMNDEKFNLKHHH 233 human
5F71_A        82 ADSGIYCCRIQIPGIMNDEKFNLKLVI 108 human
BAQ00264      83 ADSGVYCCRIQIPGIMNDEKHNLKLVV 109 Macaca mulatta
XP_009448319 103 ADSGIYCCRIQIPGLMNDEKFNLKLVI 129 Pan troglodytes
2OYP_A        82 DDHGTYCCRIQFPGLMNDKKLELKLDI 108 house mouse
2OR7_A        84 GDGGPYCCVVEIPGAFHFVDYMLEVKP 110 house mouse
2OR8_A        83 SDSGLYCCRVEIPGWFNDQKVTFSLQV 109 house mouse
CAD79372      83 ADSGTYCCRIQFPGPMNDEKLELKLSI 109 Rattus norvegicus
AAS59531     104 DDHGTYCCRIQFPGLMNDKKLELKLDI 130 Mus musculus
NP_001013877 100 SDSGPYCCIAEIPGAFYFVDYLLEVKA 126 Rattus norvegicus
Q8TDQ0       103 ADSGIYCCRIQIPGIMNDEKFNLKLVI 129 human

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