5TKM,2RPZ,5W3V


Conserved Protein Domain Family
APOBEC2

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pfam18772: APOBEC2 
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APOBEC2
APOBEC2 is a highly conserved (slow-evolving) family of AID/APOBECs found in most vertebrates including cartilaginous fishes. APOBEC2 is poorly understood in terms of their molecular functions and substrate specificity.
Statistics
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PSSM-Id: 465863
Aligned: 37 rows
Threshold Bit Score: 186.651
Created: 27-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
5TKM_A        19 MDRDTFYDNFENEPILSGRSYTWLCYEVKiKRGr-SNLLWDTGVFRGQvyfkPQY-HAEMCFLSWFCGn-QLPAD----- 90 
XP_003207602  46 LPAIFFKFQFRNVEYSSGRNKTFLCYVVE-TQG--KESTTSRGYLEDEh---AAS-HAEIAFFNTILP--KCESS----- 111
XP_003511809  47 LPVNFFKFQFRNVEYSSGRNKTFLCYVVE-AQSkgGQVQATRGYLEDEh---AGA-HAEEAFFNTILP--AFDPA----- 114
XP_014003082 109 MSPFYFKFQFRNVEYSSGRNKTLLCYRVE-TPEg--ATGPLQGYMEDEh---ATA-HVEVAFFTQVLP--HYDSS----- 174
XP_013873612  96 MSPFYFKFQFRNVEYSSGRNKTFLCYRVD-TAGg--DTEPLKGYMEDEh---AMA-HVEEAFFQQVLP----NSS----- 159
KPP67229      63 LASFLFKFQFKNVEYSSGRNKTLLCFLVD-SQKgyLEDELQRGYLEDEh---LGA-HAEEAFFQQVLP--EYDPG----- 130
XP_011611927  75 IDPLVFQFQFKNVEYSSGRNKTFLCYLVD-TGKa--DEGLQRGYLEDEh---TGS-HAEEAFFTQCLP--HYDPA----- 140
XP_014006857  10 LAQKKFIYHYKNMRWAKGRHETYLCFVVK-RRVgpNSLSFDFGHLRNR----SGC-HVELLFLRLLEAg-ALCPGlwgyg 82 
XP_015218858  22 LPQDHFYQEFCNTLR---TCRTLLCFSLC-QST--KILWDIWGYAYNK----PGHsHAESMVLEEIKTflTQNQPdk--- 88 
2RPZ_A         9 LPVNFFKFQFRNVEYSSGRNKTFLCYVVE-VQSkgGQAQATQGYLEDEh---AGA-HAEEAFFNTILP--AFDPA----- 76 
5TKM_A        91 ------KCFQITWFVSWTPCPDCVAKLAEFLSEHPNVTLTISAARLYyYS-ER-DYRRALCRLSQAGARVKIMDYEEFAY 162
XP_003207602 112 ------LRYNITWYVSSSPCVTCADRISETLRKNKNLRLTIMVGRLF-MWeEP-EMQAALKKMKSAGCKLRIMKPQDFEY 183
XP_003511809 115 ------LKYNVTWYVSSSPCAACADRILKTLSKAKNLRLLILVGRLF-MWeEP-EVQAALKKLKEAGCKLRIMKPQDFEY 186
XP_014003082 175 ------QEYEVRWYVSSSPCAACYTKMADVLRQRKKLRLYLLMSRLf-LWeEP-EIEVGLRCLASLGVRMRMMKPSDFLS 246
XP_013873612 160 ------KEHDITWFVSSSPCAACAAKLATILQQRKKLRLTIFCSRLf-EWeEP-EIREGLKALARAGCKLRMMKPADFQL 231
KPP67229     131 ------RRYQVTWYVSSSPCAACAAKLAEILRARPTLRLTIFSARLf-MWeEP-EIQEGLKALAAAGCKLRVMKPVDFSY 202
XP_011611927 141 ------LKYSVTWYMSSSPCCACAAKMAEALKARRNIKLSIFAARLf-EWeEA-EIQAGLKALHIAGCKIRVMKPLDFSY 212
XP_014006857  83 apdsvgLCYSVTWFCSWSPCSDCSYRLAQFLSQTPNLRLRIYVSRLYfCDpEDsSAREGLRMLQRAGVQITVMNYEDYFY 162
XP_015218858  89 -----tLKYTLTLYMSFSPCNECCYRLATYAKLERRIKINVMFSKLYfPE-HR-KIQKGLQYLECAGVSLKVMEKQDFVT 161
2RPZ_A        77 ------LKYNVTWYVSSSPCAACADRILKTLSKTKNLRLLILVSRLf-MWeEP-EVQAALKKLKEAGCKLRIMKPQDFEY 148
5TKM_A       163 CWENFVDNEG---Q----QFMPWYKFDENYAFLHRTLKEILR 197
XP_003207602 184 VWQNFVEQEE---GeeakAFVPWEDIQENFQYYEEKLAEILQ 222
XP_003511809 187 IWQNFVEQEE---Ges-kAFEPWEDIQENFLYYEEKLADILK 224
XP_014003082 247 VWETFVEKEE---Dm---TFNPWEDCQDNYQYYQSRLNTFLK 282
XP_013873612 232 VWEMYVDKED---E----EFAPWEDCKENYEYYLEKLGEILN 266
KPP67229     203 TWDTFVENED---Q----TFSPWEDCQENYEYYQEKLAGILQ 237
XP_011611927 213 TWDTFVENED---Q----PLNLWADCKENYEYYHERLADILQ 247
XP_014006857 163 CWQTFVACRQ---R----VFKAWDGLHQNSVQLARKLNDILQ 197
XP_015218858 162 CFYLFVTEHE--------AFQEWHCLDDMTKQYSSTLQAILN 195
2RPZ_A       149 IWQNFVEQEEgesK----AFEPWEDIQENFLYYEEKLADILK 186
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