Conserved Protein Domain Family
WDR74

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cd22857: WDR74 
WD repeat-containing protein 74
WDR74 (WD repeat-containing protein 74) from mammals and plants is an essential factor for ribosome assembly. In cooperation with the assembly factor NVL2, WDR74 participates in an early cleavage of the pre-rRNA processing pathway. NVL2 is a type II double ring, AAA-ATPase, that may mediate the release of WDR74 from nucleolar pre-60S particles. WDR74 has been implicated in tumorigenesis. In lung cancer, it regulates cell proliferation, cell cycle progression, chemoresistance and cell aggressiveness, by inducing nuclear beta-catenin accumulation and driving downstream Wnt-responsive genes expression. In melanoma, it promotes apoptosis resistance and aggressive behavior by regulating the RPL5-MDM2-p53 pathway. WDR74 contains an N-terminal seven-bladed beta-propeller WD40 domain that associates with the D1-AAA domain of the AAA-ATPase NVL2, and a flexible lysine-rich C-terminus that extends outward from the WD40 domain, and is required for nucleolar localization.
Statistics
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PSSM-Id: 439303
Aligned: 57 rows
Threshold Bit Score: 256
Created: 22-Feb-2021
Updated: 17-Oct-2022
Structure
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Aligned Rows:
  next features
Feature 1:putative rRNA binding site [nucleic acid binding site]
Evidence:
  • Comment:based on the structure of yeast Nsa1 bound to 25S rRNA

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                        
XP_021888455  23 LGLIKVVEARDKQg-------------------------------------------EVPKVVDRWGDPDS--------- 50  papaya
PSS06885      10 LGAIKTVDYSQNGsk----------------------------------------ewTSSTKVLFQGQEGK--------- 40  Phlebia centrifuga
KDQ33248      10 LGNIKRLHYNPNPsn-----------------------------------------tDDPKTTIKTVLNGSt-------- 40  Pleurotus ostre...
THH32102      10 LGAIKHITYTQTSe------------------------------------------rWTPLNTTLFAGSSEg-------- 39  Antrodiella cit...
PAV23245      10 LGNIKILECCPDIdpstsew------------------------------kfnerilDAPILGNANSSSIEvek------ 53  Pyrrhoderma noxium
OMJ07359       9 SGLLKCINVKNLNekhedapsnkkqrmkkdeaknvqikqnkkkdkaktasddesastDPGKVTILNGKVSR--------- 79  Smittium culicis
PVV05279      57 PGIVKNRKQVAQEhlss-------------------------------------qkeRTETEVDTNSKSSDtvikiisgt 99  Smittium megazy...
OBZ75240      10 LGAVKSIRYTPEEnnk--------------------------------------ewkVESNILVAGGSSGK--------- 42  Grifola frondosa
ORZ37834       9 GGQLKSIPYGAGTstaiarqqslvpi------------------qpgarsaaefaakAANSQVTTYGNLDK--------- 61  Catenaria angui...
CCA69215      35 NGAVKLVNARNIEenda-------------------------------------kssSIKYTLDAQIIPSTs-------- 69  Serendipita ind...
Feature 1                                                                                        
XP_021888455  51 ---SKCVLAASFDDsr--------------sNPLLAVARRSGEVEILnp---lnGDVHVAISAASnpd------------ 98  papaya
PSS06885      41 ---NKAIQKLALSAed-------------dsNTLLAAVRADGSTNVFtv----nSELECEEQWQWket------------ 88  Phlebia centrifuga
KDQ33248      41 --sASSVQALSTSGd----------------SRMVVAARANKTVHVYkwn--edETLEARCSWSEtr------------- 87  Pleurotus ostre...
THH32102      40 --kGKAFQKLAAFTqv-------------dsQTLLAAARADGTAVVLavs--edGETAETVSEWKet------------- 89  Antrodiella cit...
PAV23245      54 -arKAAINRLSITDnn--------------dNLMLAASRSNGTCSVYtln-nedNELETVQEWKEtr------------- 104 Pyrrhoderma noxium
OMJ07359      80 ---QHNIEQMELVSidsnnshlffififlcyEPQIVVGRRNGQVDLIna---stGNIDSTFSDSLfedkvkl----tfyg 149 Smittium culicis
PVV05279     100 vqrEKAIDQLQLASvt-------------ndNLQLAVARRCGSVELIda---ksGSTISTFEDPIfnekvsi----kinq 159 Smittium megazy...
OBZ75240      43 ---TKAVQKLALQRda-------------ssVTLLTAVRADGSSSSYrvk--edSSVDVLHEWTEpr------------- 91  Grifola frondosa
ORZ37834      62 ---AAGITHLASVHmc--------------gRDLVLIARKNGTVDVWdha--ltGNPELTPLLVSvavyeesemegktkd 122 Catenaria angui...
CCA69215      70 ---SRSVQKLAIGTha--------------gKDLVAIARADGSTSVHttenlrsGELVTVSQWREsikrf--------kt 124 Serendipita ind...
Feature 1                                                                                        
XP_021888455  99 irSNDDAIVGLHLFkrqqleqerrTCNIFTCTAKgn-----aSLRCIDVAdl------haESSSIGSVKmwkv------- 160 papaya
PSS06885      89 rlRDGQKFVGAAYT----------STGVYSCTSNg-------ALRLTKLSre-------aDGGLHSELAal--------- 135 Phlebia centrifuga
KDQ33248      88 -mKPETRFVGLAFS----------NDTVYSCTSNg-------AFRRTGLPe---------ASSADPTPThqla------- 133 Pleurotus ostre...
THH32102      90 rlKDGQRYVGLSAT----------TGGIYSCTSNg-------ALRLTQPNg---------DDTPAFQLAal--------- 134 Antrodiella cit...
PAV23245     105 -lSGGNKFIGLNLT----------QRGIFWCASNg-------ALGFSNVTpg-------gDNTEKVAAPyqka------- 152 Pyrrhoderma noxium
OMJ07359     150 hhIKNYKYVGLQAN----------NTHFISCTNVg-------NIRYQKFDf---------DSLTKSEIEdkdqivepftm 203 Smittium culicis
PVV05279     160 ktINECFYVGLMTN----------DRHFSTCTNLghfrfqpwNLDKSEKPe---------DSDLCGSLPfkm-------- 212 Smittium megazy...
OBZ75240      92 -lKSGQRYVGLAMS----------ESGIYTCTSNg-------ALRLTKLGa---------DESASTSEAas--------- 135 Grifola frondosa
ORZ37834     123 emEKMKEVVGLEALs---------DDTFYAVTRTg-------TLSAFTLSlyvatsedetDTMDVVSTTri--------- 177 Catenaria angui...
CCA69215     125 dgSNEDNWVGLNIH----------PLGIVQSNQRg-------QARLTALEk---------DTSEVSAFHcn--------- 169 Serendipita ind...
Feature 1                                                                                 #  ### 
XP_021888455 161 cntGNILCSKVDS---TDKFALFGGKSVEVNVWDL-----------------------------EKCSKIWTAKPTAKNN 208 papaya
PSS06885     136 --pMRLAEWRLAP---NQQTFAYAGDEVELSVWDTerafsagpqeagssknndseskkrkrseqLLSNEIWRAKNLPNDT 210 Phlebia centrifuga
KDQ33248     134 alpSNLHAWRMSP---DSETFAYGGDEIDLSVWNVeqafmdrtnlksd----nptskkrkrnaqLLPGEIWRANNVPNDH 206 Pleurotus ostre...
THH32102     135 --pMRLTEWRLSQ---NVETFTYAGDEVEVSVWNTerafaeastsrkpvptsedatkkrkrseqLLPGEIWRAKNLPNDE 209 Antrodiella cit...
PAV23245     153 slpTRLCAWRLSG---DSTNFAYGGNEVDLSVWDTeqalqtggivtqr---tdsdskkrkrgndLFPGEIWRAKNLPNDS 226 Pyrrhoderma noxium
OMJ07359     204 klgYGMCRMKAQPd--DISKFAVGGVEEDLKIWDInkvkfkpd--------------tesatnvPSSHAIFIAKNVEHDE 267 Smittium culicis
PVV05279     213 klePGLCKMKSQKh--NFNAFAVGGNEQDLKIYDInkvefkkd-------------tvcewrspVLKSALFSAKNVPNDY 277 Smittium megazy...
OBZ75240     136 -lpMRLCDWRLSS---DGNTFAYGGDEVELSVWDAeqaftgtetsvpt----iaeskkrkrvdqLIPGEIWRAKNVSNDN 207 Grifola frondosa
ORZ37834     178 -slGGANLDRVRScpgHPHLLALGGKDRDLSILDLnlaldkaapkkgdvrfnglgveptkwngeLNPTFVWFAKNLPNDM 256 Catenaria angui...
CCA69215     170 -vpVNLRHFAATS---TGRHFAYAGTEVNLSVWDSerafrasessn--------gekrrraekdLFPAELWRAKNVANDN 237 Serendipita ind...
Feature 1           #                         #                    #      ###                    
XP_021888455 209 LGIFTPTWFTSATFLSKDDHrk------fVAGTNSHQVRVYDISAQRRPVIs--FDFRETTIKAIA-EDLDGYTIYVGNG 279 papaya
PSS06885     211 LNLRQPVRNTAITYLQPSAStsq---qhlLVGTQFGDVRRYDTRAARRPVEn-wKGVAKVGAVGVIeKGLSEHEIFVSDR 286 Phlebia centrifuga
KDQ33248     207 LGLRQPIRISSLTYLPNTSPhh------lATGTQFGDVRLYDTRAARRPLSnwkIFKDGSGVKTVE-AGPSNHQIFVSDS 279 Pleurotus ostre...
THH32102     210 LNLRHPVRNTALTYLQPSANtsq---qhlLVGTQFGDVRRYDTRAARRPVAn--WKVGKVGGIGVVeIGTHEHEAFAADQ 284 Antrodiella cit...
PAV23245     227 LNLRQPIHITSLTYIPTSSGatssksvhiVTGTETGDVRRYDTRSARRPVAn-wKGIGKIGGIGVVeAGTREHELFVSDK 305 Pyrrhoderma noxium
OMJ07359     268 LGLRQPVWITDIAFLNPGTAdtt----kvVTSTGYGQVRIYDTKASKKPVHn--YEILTNPITNFCiSKQNDHVMYLTDN 341 Smittium culicis
PVV05279     278 LGLRVPVWITDIEFADKKNQtdh---skiITSTGYGQIRIYDIRVKKQPVLd--IQANDNFINTIL-LAENERDLYFSDN 351 Smittium megazy...
OBZ75240     208 LNLRQPVHITALTYLETPTStsh---nhlVTGTQLGNVRRYDTRAARRPVSdwkGVGKIGGVSAIE-KGLSEHEIFVADH 283 Grifola frondosa
ORZ37834     257 LDLAIPIWITDLRFVNAEGSk-------lATCTMYHEVKFYNTATNRRPLAv--VYTGDYPLRSLStIPSRPTEVLASDA 327 Catenaria angui...
CCA69215     238 LDLRQPVNISSFTFLSREDTgah---hsiAVGNTLGAVHRYDTRRGKKPVSt-wQDARMSGGVSVVeRGIREHELYVADC 313 Serendipita ind...
Feature 1                                                    ####  #                             
XP_021888455 280 SGDLASFDTR---------------------------TGKLLGCFLGKCSGs----------IRSIVRHSEHPVIASCGL 322 papaya
PSS06885     287 GCNLFALDLR---------------------------NGKVAYGYKGLAGAvtsia-pspsfVASGADDRFLRLHSTFSL 338 Phlebia centrifuga
KDQ33248     280 QSRLFAVDIR---------------------------NGSVSYGYKGIAGAvssva-lsqslMASTSLDRYVRIHSIFAP 331 Pleurotus ostre...
THH32102     285 GTNLYAIDLR---------------------------NGQVTYGYKSIAGAvtsva-ssgtyLASTAQDRYLRLHSTFPP 336 Antrodiella cit...
PAV23245     306 GSNFSALDLR---------------------------NGHTLYSYKQIQGSitsispspgslLGSTSHDRFFRVHSTVPL 358 Pyrrhoderma noxium
OMJ07359     342 TGVVSQIDLR---------------------------TGFTTSTYNVSNGKi----------TSMAVVGARGSHLATVGL 384 Smittium culicis
PVV05279     352 KGGIFQIDLNmalsrratldke---lrlekevdipttENKLNLNKKVISIHpg--------aVKSLSLMGNDSHLAAVGL 420 Smittium megazy...
OBZ75240     284 GCNLFALDLR---------------------------NGRTIYGYQGISGAvssla--papsLLASASQDRFLRLHSTFP 334 Grifola frondosa
ORZ37834     328 KGAIHHISLTkavtefakikqtktnpdnprnrnwnvrQGKPVVTRQALIGGfag------aqGAVRHVVTDGKMVIGVGL 401 Catenaria angui...
CCA69215     314 ATQLWAIDMRk--------------------------AKEPLYSYKGISGK-----------ITSITACQSGGYIAAGSL 356 Serendipita ind...
Feature 1                                                 
XP_021888455 323 DSYLRFWDINSRQLLSAVF--LKQHLNAVVLCSSFGVEELA 361 papaya
PSS06885     339 PSAVGEQQEQKGDVLDKLY--MKVTPTAVVWDGKVSAAISE 377 Phlebia centrifuga
KDQ33248     332 PLQAGKAQDEKGDVLEKLF--VTSIPTAIVCDEEAMLPADG 370 Pleurotus ostreatus PC15
THH32102     337 PSEIGQQQDNKGEVLDKLY--VKSVPTCIVADPSSPRSMEE 375 Antrodiella citrinella
PAV23245     359 SKKAGQQQEERGEVLGKHY--MKSVPTAVVFDITSDASDIA 397 Pyrrhoderma noxium
OMJ07359     385 NRKLIVYRISKKKEIVYQTy-LKQSMTKVLWDDSINIEGEA 424 Smittium culicis
PVV05279     421 DRKLSIYRISGKKNELVVQsyMKQRMSAVVYDYSSGFSGSG 461 Smittium megazygosporum
OBZ75240     335 PLLKAGQQDKKGAILDKLY--VKVIPTAVIWDCSPDIALEK 373 Grifola frondosa
ORZ37834     402 DRFVRFWDLESHQPRVKFF--AKQRLEACAVWTAGLVAPDA 440 Catenaria anguillulae PL171
CCA69215     357 DRYFRLLSSAPANQTSEKG--DLMGHGDVVGKLYITAPPTA 395 Serendipita indica DSM 11827

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