2DO7,1U6G,1IUY,3O6B,3DPL


Conserved Protein Domain Family
Cullin_Nedd8

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smart00884: Cullin_Nedd8 
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Cullin protein neddylation domain
This is the neddylation site of cullin proteins which are a family of structurally related proteins containing an evolutionarily conserved cullin domain. With the exception of APC2, each member of the cullin family is modified by Nedd8 and several cullins function in Ubiquitin-dependent proteolysis, a process in which the 26S proteasome recognises and subsequently degrades a target protein tagged with K48-linked poly-ubiquitin chains. Cullins are molecular scaffolds responsible for assembling the ROC1/Rbx1 RING-based E3 ubiquitin ligases, of which several play a direct role in tumorigenesis. Nedd8/Rub1 is a small ubiquitin-like protein, which was originally found to be conjugated to Cdc53, a cullin component of the SCF (Skp1-Cdc53/CUL1-F-box protein) E3 Ub ligase complex in Saccharomyces cerevisiae, and Nedd8 modification has now emerged as a regulatory pathway of fundamental importance for cell cycle control and for embryogenesis in metazoans. The only identified Nedd8 substrates are cullins. Neddylation results in covalent conjugation of a Nedd8 moiety onto a conserved cullin lysine residue.
Statistics
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PSSM-Id: 214883
Aligned: 85 rows
Threshold Bit Score: 53.3142
Created: 13-Jul-2011
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2DO7_A         24 VFQDRQYQIDAAIVRIMKMRKT--LSHNLLVSEVYNQLK------------FPV-----KPADLKKRIESLIDRDYMERD 84   human
CBZ38692     1852 ysaDSAHKIKVCIVRIMKVERV--LPHRELVERVALALEg----------qFVV-----TPSQFKRCVTHLIEKEFLQRG 1914 Leishmania do...
CBH09765      878 IMKDRVHVVDAAIVRLMKQRRR--ASHEEVMEEVPKLVr------------FPV-----TASAVKESARRLTERGFLERG 938  Trypanosoma b...
CBZ36576     1125 TITKRRNMIKTSIMQIMKHVQR--IKHDELYNTVREKNAk----------aFDV-----TVRNFKQEIEGLIGQDFMARS 1187 Leishmania do...
CAG05108     1906 TLERKRNYIYCLIVHILKQEKE--MHIDNLVFKVLESCQkqeamrspaggrFSC-----TTSDVLSCIMHVISRGCARRN 1978 spotted green...
XP_001466163  996 TADNGGHLVEVAIVSCLKAQRT--MTRIDLASAVAARVP------------FPV-----TTAVLKKAIDKMIERGFMVRG 1056 Leishmania in...
XP_001387419  712 ISRNRTDELKGAIVKVMKEFKQ--LSVTELLNKAIEGVEk----------rGPV-----TLTELKKNIDDLVDSEYLRRV 774  Pichia stipit...
CBZ38759      634 mdgaRTMSLDATIVKLLKEHNS--MDYQTLCGAIESALRd----------vCSP-----TRADVKLRIDALIEKGLITRG 696  Leishmania do...
XP_001513808 1533 aLEKKRNLLSCLLVRILKTRGEggLHVDHLVCLVLEAWKe----------tAPPgggfcSNADVLSCILHLLGQGYMRRR 1602 platypus
NP_012488     774 NSQWTQELLKACITRSVKSERNg-LDYDHLFETVKQQIKg------------------fSVGEFKDALAKLLRDKFITRD 834  Saccharomyces...
2DO7_A         85 KENPN 89   human
CBZ38692     1915 EQGEY 1919 Leishmania donovani BPK282A1
CBH09765      939 NTNEY 943  Trypanosoma brucei gambiense DAL972
CBZ36576     1188 CKDSN 1192 Leishmania donovani BPK282A1
CAG05108     1979 EENPH 1983 spotted green pufferfish
XP_001466163 1057 KDNAY 1061 Leishmania infantum JPCM5
XP_001387419  775 DRETl 779  Pichia stipitis CBS 6054
CBZ38759      697 ESAHC 701  Leishmania donovani BPK282A1
XP_001513808 1603 EEQPq 1607 platypus
NP_012488     835 ESTAT 839  Saccharomyces cerevisiae S288c
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