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Accession: PRJNA493923 ID: 493923

Oryza sativa cultivar:FL478 (Asian cultivated rice)

Dissecting Molecular Mechanisms Underlying Salt Tolerance in Rice: A Comparative Transcriptional Profiling of the Contrasting Genotypes (IR29 vs. FL478)

See Genome Information for Oryza sativa
Oryza sativa Indica group FL478 (salt tolerant) seedlings were subjected to salt stress (150 mM) and root samples collected at 24h after salt treatments. Reads of 150 bp length were generated with the IlluminaHiSeqâ„¢ 2500 platform.
AccessionPRJNA493923
Data TypeRaw sequence reads
ScopeMonoisolate
OrganismOryza sativa[Taxonomy ID: 4530]
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
PublicationsMirdar Mansuri R et al., "Dissecting molecular mechanisms underlying salt tolerance in rice: a comparative transcriptional profiling of the contrasting genotypes.", Rice (N Y), 2019 Mar 4;12(1):13
SubmissionRegistration date: 29-Sep-2018
Agricultural Biotechnology Research Institute of Iran
RelevanceAgricultural
Locus Tag PrefixD7Z30
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments4
Publications
PubMed1
PMC1
Other datasets
BioSample4
SRA Data Details
ParameterValue
Data volume, Gbases33
Data volume, Mbytes12832

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