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Accession: PRJEB6337 ID: 252687

metagenome

Liver cirrhosis occurs as a consequence of many chronic liver diseases that are prevalent worldwide. Previous studies have shown an association between the gut microbiota and liver complications such as cirrhosis and other liver injuries. We therefore undertook a whole gut microbiome wide association study of stool samples from 98 liver cirrhosis patients and 83 healthy controls to characterise the faecal microbial communities and their functional composition. In total, we generated 860 Gb of high-quality sequence data and built a reference gene set for the liver cirrhosis cohort containing 2.69 million genes, 36.1% of which was not covered by previously published gene catalogues.

Liver cirrhosis occurs as a consequence of many chronic liver diseases that are prevalent worldwide. More...
AccessionPRJEB6337
ScopeMonoisolate
Organismmetagenome[Taxonomy ID: 256318]
unclassified sequences; metagenomes; metagenome
SubmissionRegistration date: 13-Jun-2014
the first affiliated hospital, zheng zhou university.
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments314
Other datasets
BioSample312
SRA Data Details
ParameterValue
Data volume, Gbases1,208
Data volume, Tbytes0.87

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  • metagenome
    metagenome
    Liver cirrhosis occurs as a consequence of many chronic liver diseases that are prevalent worldwide. Previous studies have shown an association between the gut microbiota and liver complications such as cirrhosis and other liver injuries. We therefore undertook a whole gut microbiome wide association study of stool samples from 98 liver cirrhosis patients and 83 healthy controls to characterise the faecal microbial communities and their functional composition. In total, we generated 860 Gb of high-quality sequence data and built a reference gene set for the liver cirrhosis cohort containing 2.69 million genes, 36.1% of which was not covered by previously published gene catalogues.
    BioProject
  • BioProject Links for SRA (Select 845744) (1)
    BioProject

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