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Links from Nucleotide

Accession: PRJDB5091 ID: 353932

Garcinia mangostana

De novo Assembly and Comparative Transcriptome Analyses of two physiological disorders (Translucent Flesh and Gamboge Disorders) in mangosteen (Garcinia mangostana L.) fruit.

We conducted Ion Proton systems-based RNA sequencing analysis to establish the first de novo transcriptome assembly and differential gene expression analysis in the occurrence of translucent flesh and gamboge disorders in mangosteen. More...
AccessionPRJDB5091
Data TypeTranscriptome or Gene expression
ScopeMultiisolate
OrganismGarcinia mangostana[Taxonomy ID: 58228]
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Clusiaceae; Garcinieae; Garcinia; Garcinia mangostana
Publications
  • Matra DD et al., "Comparative transcriptome analysis of translucent flesh disorder in mangosteen (Garcinia mangostana L.) fruits in response to different water regimes.", PLoS One, 2019;14(7):e0219976
  • Matra DD et al., "De novo transcriptome assembly of mangosteen (Garcinia mangostana L.) fruit.", Genom Data, 2016 Dec;10:35-7
Grants
  • "Human Resource Development Program in Agricultural Genome Sciences" (Grant ID -, Tokyo University of Agriculture and Technology)
SubmissionRegistration date: 16-Nov-2016
Laboratory of Horticultural Science, Ibaraki University
RelevanceAgricultural
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)183275
TSA master1
Transcript183274
SRA Experiments36
Publications
PubMed2
PMC2
Other datasets
BioSample36
SRA Data Details
ParameterValue
Data volume, Gbases81
Data volume, Mbytes64437

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