mTriVul1.pri

Organism name:

Trichosurus vulpecula (common brushtail)

Isolate:

mTriVul1

Sex:

male

BioSample:

SAMN12629507

BioProject:

PRJNA562014

Submitter:

Vertebrate Genomes Project

Date:

2020/03/10

Assembly type:

haploid (principal pseudohaplotype of diploid)

Assembly level:

Chromosome

Genome representation:

full

RefSeq category:

representative genome

GenBank assembly accession:

GCA_011100635.1 (latest)

RefSeq assembly accession:

GCF_011100635.1 (latest)

RefSeq assembly and GenBank assembly identical:

no (hide details)

• Different: chromosome MT.

• Data displayed for RefSeq version

WGS Project:

JAANDE01

Assembly method:

FALCON v. DNANexus 1.9.0; FALCON-Unzip v. DNANexus 1.0.6; purge_haplotigs v. v1.0.3+ 1.Nov.2018; scaff10x v. 4.1.0; Bionano Solve DLS v. 3.2.1; Salsa HiC v. 2.2; Arrow smrtanalysis Pacbio polishing & gap filling v. 6.0.0.47841; longranger align v. 2.2.2; freebayes Illumina polishing v. 1.3.1; gEVAL manual curation v. 2020-01-15; VGP assembly pipeline v. 1.5

Expected final version:

no

Genome coverage:

60.73x

Sequencing technology:

PacBio Sequel; Illumina NovaSeq; Arima Genomics Hi-C; Bionano Genomics DLS

Linked assembly:

GCA_011100645.1 (alternate pseudohaplotype of diploid)

IDs: 6117481 [UID] 17408528 [GenBank] 22475158 [RefSeq]