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GSC_monkey_1.0

Organism name:
Sapajus apella (tufted capuchin)
Isolate:
SASKATOON/1434
Sex:
female
BioSample:
SAMN13265339
BioProject:
PRJNA588076
Submitter:
Canada's Genomic Enterprise
Date:
2019/12/17
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_009761245.1 (latest)
RefSeq assembly accession:
GCF_009761245.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
WRPQ01
Assembly method:
Supernova v. 2.1.1
Expected final version:
yes
Genome coverage:
34.0x
Sequencing technology:
Illumina HiSeq

IDs: 5395961 [UID] 15641818 [GenBank] 15734448 [RefSeq]

See Genome Information for Sapajus apella

Pathogen Detection Resources

There are 5 assemblies for this organism

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History (Show revision history)

Comment

Global statistics

Total sequence length2,729,201,088
Total ungapped length2,693,375,645
Gaps between scaffolds0
Number of scaffolds17,902
Scaffold N5023,742,480
Scaffold L5035
Number of contigs60,551
Contig N50144,042
Contig L505,265
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)60,551

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length		Scaffold
Count		Ungapped
Length		Scaffold
N50		Spanned
Gaps		Unspanned
Gaps
unplaced2,729,201,08817,9022,693,375,64523,742,48042,6490