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Source database (GenBank or RefSeq) File type

ASM756505v1

Organism name:

Rhinopithecus roxellana (golden snub-nosed monkey)

Isolate:

Shanxi Qingling

Sex:

male

BioSample:

SAMN11039125

BioProject:

PRJNA524949

Submitter:

Northwest University

Date:

2019/07/29

Assembly level:

Chromosome

Genome representation:

full

RefSeq category:

representative genome

GenBank assembly accession:

GCA_007565055.1 (latest)

RefSeq assembly accession:

GCF_007565055.1 (latest)

RefSeq assembly and GenBank assembly identical:

no (hide details)

Only in RefSeq: chromosome MT

Data displayed for RefSeq version

WGS Project:

VMRL01

Assembly method:

FALCON v. June-2016

Expected final version:

yes

Genome coverage:

100.0x

Sequencing technology:

PacBio Sequel

IDs: 4120761 [UID] 12697768 [GenBank] 13709688 [RefSeq]

See Genome Information for Rhinopithecus roxellana

Pathogen Detection Resources

There are 3 assemblies for this organism

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_007565055.1	≠	GCF_007565055.1	ASM756505v1	Chromosome	Latest GenBank, Latest RefSeq

Comment

Global statistics

Total sequence length	3,038,477,066
Total ungapped length	3,038,194,004
Gaps between scaffolds	0
Number of scaffolds	3,257
Scaffold N50	144,559,847
Scaffold L50	9
Number of contigs	6,089
Contig N50	5,723,610
Contig L50	151
Total number of chromosomes and plasmids	23
Number of component sequences (WGS or clone)	3,257

Molecule name	GenBank sequence		RefSeq sequence	Unlocalized sequences count
Chromosome 1	CM017351.1	=	NC_044549.1	0
Chromosome 2	CM017352.1	=	NC_044550.1	0
Chromosome 3	CM017353.1	=	NC_044551.1	0
Chromosome 4	CM017354.1	=	NC_044552.1	0
Chromosome 5	CM017355.1	=	NC_044553.1	0
Chromosome 6	CM017356.1	=	NC_044554.1	0
Chromosome 7	CM017357.1	=	NC_044555.1	0
Chromosome 8	CM017358.1	=	NC_044556.1	0
Chromosome 9	CM017359.1	=	NC_044557.1	0
Chromosome 10	CM017360.1	=	NC_044558.1	0
Chromosome 11	CM017361.1	=	NC_044559.1	0
Chromosome 12	CM017362.1	=	NC_044560.1	0
Chromosome 13	CM017363.1	=	NC_044561.1	0
Chromosome 14	CM017364.1	=	NC_044562.1	0
Chromosome 15	CM017365.1	=	NC_044563.1	0
Chromosome 16	CM017366.1	=	NC_044564.1	0
Chromosome 17	CM017367.1	=	NC_044565.1	0
Chromosome 18	CM017368.1	=	NC_044566.1	0
Chromosome 19	CM017369.1	=	NC_044567.1	0
Chromosome 20	CM017370.1	=	NC_044568.1	0
Chromosome 21	CM017371.1	=	NC_044569.1	0
Chromosome 22	CM017372.1	=	NC_044570.1	0
unplaced	n/a	n/a	n/a	3,234

Molecule	Total Length	Scaffold Count	Ungapped Length	Scaffold N50	Spanned Gaps
All	3,038,460,517	3,256	3,038,177,455	144,559,847	2,832
Chromosome 1	206,558,726	1	206,551,726	206,558,726	70
Chromosome 2	195,417,433	1	195,404,033	195,417,433	134
Chromosome 3	185,537,619	1	185,520,619	185,537,619	170
Chromosome 4	178,837,623	1	178,824,423	178,837,623	132
Chromosome 5	177,574,763	1	177,553,632	177,574,763	212
Chromosome 6	156,498,330	1	156,481,730	156,498,330	166
Chromosome 7	154,578,354	1	154,566,254	154,578,354	121
Chromosome 8	145,729,886	1	145,720,186	145,729,886	97
Chromosome 9	144,559,847	1	144,551,447	144,559,847	84
Chromosome 10	142,951,011	1	142,939,111	142,951,011	119
Chromosome 11	141,075,955	1	141,053,055	141,075,955	229
Chromosome 12	136,711,189	1	136,699,189	136,711,189	120
Chromosome 13	135,203,321	1	135,192,521	135,203,321	108
Chromosome 14	135,287,999	1	135,277,699	135,287,999	103
Chromosome 15	130,852,392	1	130,841,692	130,852,392	107
Chromosome 16	118,350,466	1	118,338,566	118,350,466	119
Chromosome 17	116,895,751	1	116,883,551	116,895,751	122
Chromosome 18	99,605,074	1	99,597,974	99,605,074	71
Chromosome 19	83,045,532	1	83,031,932	83,045,532	136
Chromosome 20	82,173,002	1	82,158,871	82,173,002	142
Chromosome 21	81,002,553	1	80,988,453	81,002,553	141
Chromosome 22	15,569,616	1	15,556,716	15,569,616	129
unplaced	74,444,075	3,234	74,444,075	35,863	0

Assembly

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ASM756505v1

See Genome Information for Rhinopithecus roxellana

Pathogen Detection Resources

There are 3 assemblies for this organism

History (Show revision history)

Comment

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Assembly Unit Name
Primary Assembly
non-nuclear