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ASM386056v1

Organism name:
Cloacibacterium normanense (CFB group bacteria)
Taxonomy check:
OK
Infraspecific name:
Strain: NRS-1
BioSample:
SAMN05731713
BioProject:
PRJNA498697
Submitter:
Bacterial Special Pathogens Branch (CDC)
Date:
2018/12/04
Assembly type:
na
Assembly level:
Complete Genome
Genome representation:
full
RefSeq category:
representative genome
Relation to type material:
assembly from type material
GenBank assembly accession:
GCA_003860565.1 (latest)
RefSeq assembly accession:
GCF_003860565.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
Assembly method:
HGAP v. 3
Expected final version:
yes
Reference guided assembly:
N/A (de novo assembly)
Genome coverage:
201.2x
Sequencing technology:
PacBio

IDs: 2129651 [UID] 7983298 [GenBank] 7989798 [RefSeq]

See Genome Information for Cloacibacterium normanense

There are 10 assemblies for this organism

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History (Show revision history)

Comment

The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://0-www-ncbi-nlm-nih-gov.brum.beds.ac.uk/genome/annotation_prok/

Genome-Annotation-Data

##Genome-Annotation-Data-START##
Annotation Provider::NCBI RefSeq
Annotation Date::10/22/2023 00:52:51
Annotation Pipeline::NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
Annotation Method::Best-placed reference protein set; GeneMarkS-2+
Annotation Software revision::6.6
Features Annotated::Gene; CDS; rRNA; tRNA; ncRNA
Genes (total)::2,545
CDSs (total)::2,497
Genes (coding)::2,474
CDSs (with protein)::2,474
Genes (RNA)::48
rRNAs::2, 2, 2 (5S, 16S, 23S)
complete rRNAs::2, 2, 2 (5S, 16S, 23S)
tRNAs::39
ncRNAs::3
Pseudo Genes (total)::23
CDSs (without protein)::23
Pseudo Genes (ambiguous residues)::0 of 23
Pseudo Genes (frameshifted)::14 of 23
Pseudo Genes (incomplete)::9 of 23
Pseudo Genes (internal stop)::3 of 23
Pseudo Genes (multiple problems)::3 of 23
CRISPR Arrays::1
##Genome-Annotation-Data-END##

Global statistics

Total sequence length2,759,562
Total ungapped length2,759,562
Total number of chromosomes and plasmids1

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
Assembly Unit: Primary Assembly (GCF_003860575.1)
Molecule nameGenBank sequenceRefSeq sequence
Chromosome CP034157.1=NZ_CP034157.1

Assembly statistics

MoleculeTotal
Length
Chromosome 2,759,562

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Cloacibacterium normanenseCloacibacterium normanense

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_900104195.1Cloacibacterium normanensesuspected-type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_900104195.1Cloacibacterium normanensesuspected-type

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type99.9998.9799.82
Best-match type99.9998.9799.82

ANI result

Taxonomy check statusBest match statusComment
OKspecies-matchna