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P.Mucros_1.0

Organism name:
Protobothrops mucrosquamatus (snakes)
Isolate:
PMUCROS
BioSample:
SAMD00043515
BioProject:
PRJDB4386
Submitter:
Okinawa Institute of Science and Technology
Date:
2016/01/22
Release type:
minor
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_001527695.3 (latest)
RefSeq assembly accession:
GCF_001527695.2 (latest)
RefSeq assembly and GenBank assembly identical:
no (hide details)
  • Only in RefSeq: chromosome MT
  • Data displayed for RefSeq version
WGS Project:
BCNE02
Assembly method:
Discovar de novo v. r20151126
Genome coverage:
85.9x
Sequencing technology:
Illumina HiSeq 2500

IDs: 780761 [UID] 3380438 [GenBank] 3380458 [RefSeq]

See Genome Information for Protobothrops mucrosquamatus

History (Show revision history)

Comment

Global statistics

Total sequence length1,673,876,332
Total ungapped length1,542,279,527
Gaps between scaffolds0
Number of scaffolds52,280
Scaffold N50424,052
Scaffold L50924
Number of contigs167,851
Contig N5021,948
Contig L5019,485
Total number of chromosomes and plasmids1
Number of component sequences (WGS or clone)167,851

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
non-nuclear
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced1,673,859,09852,2791,542,262,293424,052115,5710
MoleculeTotal
Length
Mitochondrion MT17,234