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Source database (GenBank or RefSeq) File type

AZPAE14883

Organism name:: Pseudomonas aeruginosa (g-proteobacteria)
Taxonomy check:: OK
Infraspecific name:: Strain: AZPAE14883
BioSample:: SAMN03105582
BioProject:: PRJNA264310
Submitter:: AstraZeneca
Date:: 2014/12/04
Assembly type:: na
Assembly level:: Scaffold
Genome representation:: full
GenBank assembly accession:: GCA_000790645.1 (latest)
RefSeq assembly accession:: GCF_000790645.1 (latest)
RefSeq assembly and GenBank assembly identical:: yes
WGS Project:: JTTF01
Assembly method:: CLC Bio v. 6.0
Genome coverage:: 10x
Sequencing technology:: Illumina MiSeq

IDs: 228971 [UID] 1402778 [GenBank] 1416528 [RefSeq]

See Genome Information for Pseudomonas aeruginosa

Pathogen Detection Resources

There are 30801 assemblies for this organism

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_000790645.1	=	GCF_000790645.1	AZPAE14883	Scaffold	Latest GenBank, Latest RefSeq

Comment

Source DNA available from Veronica Kos, AstraZenea, 35 Gatehouse Drive, Waltham MA USA, 02451

Global statistics

Total sequence length	6,309,393
Total ungapped length	6,299,135
Gaps between scaffolds	0
Number of scaffolds	161
Scaffold N50	220,365
Scaffold L50	10
Number of contigs	294
Contig N50	220,365
Contig L50	10
Total number of chromosomes and plasmids	0
Number of component sequences (WGS or clone)	161

	ANI	Query coverage	Subject coverage
Declared type	98.86	93.62	91.81
Best-match type	98.86	93.62	91.81

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AZPAE14883

See Genome Information for Pseudomonas aeruginosa

Pathogen Detection Resources

There are 30801 assemblies for this organism

History (Show revision history)

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Best-matching type-strain assembly for declared species

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Average Nucleotide Identity (ANI) data

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