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ASM720v1

Organism name:
Chlamydia pneumoniae TW-183 (chlamydias)
Taxonomy check:
OK
Infraspecific name:
Strain: TW-183
BioSample:
SAMN02602979
BioProject:
PRJNA420
Submitter:
ALTANA Pharma
Date:
2003/07/25
Assembly type:
na
Assembly level:
Complete Genome
Genome representation:
full
RefSeq category:
representative genome
Relation to type material:
assembly from type material
GenBank assembly accession:
GCA_000007205.1 (latest)
RefSeq assembly accession:
GCF_000007205.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes

IDs: 28788 [UID] 8008 [GenBank] 28788 [RefSeq]

See Genome Information for Chlamydia pneumoniae

There are 13 assemblies for this organism

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History (Show revision history)

Comment

Genome-Annotation-Data

##Genome-Annotation-Data-START##
Annotation Provider::NCBI RefSeq
Annotation Name::GCF_000007205.1-RS_2024_03_28
Annotation Date::03/28/2024 00:23:57
Annotation Pipeline::NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
Annotation Method::Best-placed reference protein set; GeneMarkS-2+
Annotation Software revision::6.7
Features Annotated::Gene; CDS; rRNA; tRNA; ncRNA
Genes (total)::1,092
CDSs (total)::1,048
Genes (coding)::1,039
CDSs (with protein)::1,039
Genes (RNA)::44
rRNAs::1, 1, 1 (5S, 16S, 23S)
complete rRNAs::1, 1, 1 (5S, 16S, 23S)
tRNAs::38
ncRNAs::3
Pseudo Genes (total)::9
CDSs (without protein)::9
Pseudo Genes (ambiguous residues)::0 of 9
Pseudo Genes (frameshifted)::3 of 9
Pseudo Genes (incomplete)::2 of 9
Pseudo Genes (internal stop)::4 of 9
##Genome-Annotation-Data-END##

Global statistics

Total sequence length1,225,935
Total ungapped length1,225,935
Total number of chromosomes and plasmids1

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
Assembly Unit: Primary Assembly (GCF_000007215.1)
Molecule nameGenBank sequenceRefSeq sequence
Chromosome AE009440.1=NC_005043.1

Assembly statistics

MoleculeTotal
Length
Chromosome 1,225,935

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Chlamydia pneumoniae TW-183Chlamydia pneumoniae

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
samena

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_900239945.1Chlamydia serpentistype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared typenanana
Best-match type81.9358.0058.95

ANI result

Taxonomy check statusBest match statusComment
OKbelow-threshold-mismatchAssembly is the type-strain, mismatch is within genus and expected