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Vero_WHO_a1.0

Organism name:
Chlorocebus sabaeus (green monkey)
Infraspecific name:
Strain: WHO RCB 10-87
Sex:
female
BioSample:
SAMN15458746
BioProject:
PRJNA644396
Submitter:
Viral Vectors and Vaccines Bioprocessing Group, McGill University
Date:
2020/11/06
Assembly type:
alternate-pseudohaplotype
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_015251995.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
JACDXO01
Assembly method:
Supernova v. 1.0
Expected final version:
no
Genome coverage:
75x
Sequencing technology:
Illumina HiSeq
Linked assembly:
GCA_015252025.1 (principal pseudohaplotype of diploid)

IDs: 8431711 [UID] 22938238 [GenBank]

See Genome Information for Chlorocebus sabaeus

There are 3 assemblies for this organism

See more

History (Show revision history)

Comment

Global statistics

Total sequence length2,967,847,651
Total ungapped length2,959,827,841
Gaps between scaffolds0
Number of scaffolds6,876
Scaffold N5071,005,392
Scaffold L5012
Number of contigs15,623
Contig N50760,686
Contig L501,124
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)6,876

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced2,967,847,6516,8762,959,827,84171,005,3928,7470