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Source database (GenBank or RefSeq) File type

AZPAE14816

Organism name:: Pseudomonas aeruginosa (g-proteobacteria)
Taxonomy check:: OK
Infraspecific name:: Strain: AZPAE14816
BioSample:: SAMN03105517
BioProject:: PRJNA264310
Submitter:: AstraZeneca
Date:: 2014/12/04
Assembly type:: na
Assembly level:: Scaffold
Genome representation:: full
GenBank assembly accession:: GCA_000795145.1 (latest)
RefSeq assembly accession:: GCF_000795145.1 (latest)
RefSeq assembly and GenBank assembly identical:: yes
WGS Project:: JTVS01
Assembly method:: CLC Bio v. 6.0
Genome coverage:: 10x
Sequencing technology:: Illumina MiSeq

IDs: 231211 [UID] 1407258 [GenBank] 1637118 [RefSeq]

See Genome Information for Pseudomonas aeruginosa

Pathogen Detection Resources

There are 30478 assemblies for this organism

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_000795145.1	=	GCF_000795145.1	AZPAE14816	Scaffold	Latest GenBank, Latest RefSeq

Comment

Source DNA available from Veronica Kos, AstraZenea, 35 Gatehouse Drive, Waltham MA USA, 02451

Global statistics

Total sequence length	6,738,242
Total ungapped length	6,734,597
Gaps between scaffolds	0
Number of scaffolds	99
Scaffold N50	166,741
Scaffold L50	12
Number of contigs	136
Contig N50	164,668
Contig L50	12
Total number of chromosomes and plasmids	0
Number of component sequences (WGS or clone)	99

	ANI	Query coverage	Subject coverage
Declared type	98.93	88.04	94.25
Best-match type	98.93	88.04	94.25

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AZPAE14816

See Genome Information for Pseudomonas aeruginosa

Pathogen Detection Resources

There are 30478 assemblies for this organism

History (Show revision history)

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Best-matching type-strain assembly for declared species

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Average Nucleotide Identity (ANI) data

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