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Taxonomy browser (Mycobacterium shigaense)

Mycobacterium shigaense

Taxonomy ID: 722731 (for references in articles please use NCBI:txid722731)
current name
Mycobacterium shigaense Fukano et al. 2018 in [Fukano H et al. (2018)]
type strain of Mycobacterium shigaense: personal::UN-152, JCM:32072, DSM:46748
homotypic synonym:
"Mycobacterium shigaense" Nakanaga et al. 2012, effective name 1) in [Nakanaga K et al. (2012)]
includes:
Mycobacterium sp. UN-152
NCBI BLAST name: high G+C Gram-positive bacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Bacteria; Terrabacteria group; Actinomycetota; Actinomycetes; Mycobacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium simiae complex
   Entrez records   
Database name Direct links Links from type
Nucleotide 189 97
Protein 16,727 -
Genome 1 -
PubMed Central 12 -
SRA Experiments 4 -
Identical Protein Groups 8,824 -
BioProject 6 -
BioSample 7 1
Assembly 4 -
Taxonomy 1 -

Notes:

Comments and References:

Fukano H et al. (2018), PubMed: abstract
Fukano, H., Yoshida, M., Kazumi, Y., Fujiwara, N., Katayama, K., Ogura, Y., Hayashi, T., Miyamoto, Y., Fujimoto, N., Hongsheng, W., Mizumoto, C., Koizumi, Y., Maeda, H., Hiranuma, O., Mitarai, S., Ishii, N., and Hoshino, Y. "Mycobacterium shigaense sp. nov., a slow-growing, scotochromogenic species, is a member of the Mycobacterium simiae complex." Int. J. Syst. Evol. Microbiol. (2018) 68(8):2437-2442.
Nakanaga K et al. (2012), PubMed: abstract
Nakanaga, K., Hoshino, Y., Wakabayashi, M., Fujimoto, N., Tortoli, E., Makino, M., Tanaka, T., and Ishii, N. "Mycobacterium shigaense sp. nov., a novel slowly growing scotochromogenic mycobacterium that produced nodules in an erythroderma patient with severe cellular immunodeficiency and a history of Hodgkin's disease." J. Dermatol. (2012) 39(4):389-396.
Yoshida M et al. (2018c)
Yoshida, M., Fukano, H., Ogura, Y., Kazumi, Y., Mitarai, S., Hayashi, T., and Hoshino, Y. "Complete genome sequence of Mycobacterium shigaense." Genome Announc. (2018) 6:e00552-18.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Mycobacterium shigaense meta-databases BacDive
2 records from this provider organism-specific BioCyc
GOLD: Go0408867 organism-specific Genomes On Line Database
3 records from this provider organism-specific Integrated Microbial Genomes
Mycobacterium shigaense taxonomy/phylogenetic Lifemap
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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