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Taxonomy browser (Mycobacterium shinjukuense)

Mycobacterium shinjukuense

Taxonomy ID: 398694 (for references in articles please use NCBI:txid398694)
current name
Mycobacterium shinjukuense Saito et al. 2011
type strain of Mycobacterium shinjukuense: CCUG:53584, JCM:14233, personal::GTC 2738, DSM:45663
homotypic synonym:
Mycobacterium shinjukuense Saito et al. 2011 emend. Nouioui et al. 2018, emended name 1) in [Nouioui I et al. (2018c)]
includes:
Mycobacterium sp. GTC2738
NCBI BLAST name: high G+C Gram-positive bacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Bacteria; Terrabacteria group; Actinomycetota; Actinomycetes; Mycobacteriales; Mycobacteriaceae; Mycobacterium
   Entrez records   
Database name Direct links Links from type
Nucleotide 454 454
Protein 12,176 -
Genome 1 -
PubMed Central 18 -
SRA Experiments 2 -
Protein Clusters 1 -
Identical Protein Groups 6,203 -
BioProject 3 -
BioSample 5 5
Assembly 4 -
Taxonomy 1 -

Notes:

Comments and References:

Nouioui I et al. (2018c), doi: 10.3389/fmicb.2018.02007, PubMed: abstract
Nouioui, I., Carro, L., García-López, M., Meier-Kolthoff, J.P., Woyke, T., Kyrpides, N.C., Pukall, R., Klenk, H.-P., Goodfellow, M., and Göker M. "Genome-based taxonomic classification of the phylum Actinobacteria." Front. Microbiol. (2018) 9:2007.
Saito H et al. (2011)
Saito, H., Iwamoto, T., Ohkusu, K., Otsuka, Y., Akiyama, Y., Sato, S., Taguchi, O., Sueyasu, Y., Kawabe, Y., Fujimoto, H., Ezaki, T., and Butler, R. "Mycobacterium shinjukuense sp. nov., a slowly growing, non-chromogenic species isolated from human clinical specimens." Int. J. Syst. Evol. Microbiol. (2011) 61:1927-1932.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Mycobacterium shinjukuense meta-databases BacDive
4 records from this provider organism-specific BioCyc
Mycobacterium shinjukuense culture/stock collections Global Catalogue of Microorganisms
2865597299: Mycobacterium shinjukuense CCUG 53584 organism-specific Integrated Microbial Genomes
Mycobacterium shinjukuense taxonomy/phylogenetic Lifemap
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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