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Taxonomy browser (Corynebacterium glutamicum)

Corynebacterium glutamicum

Taxonomy ID: 1718 (for references in articles please use NCBI:txid1718)
current name
Corynebacterium glutamicum (Kinoshita et al. 1958) Abe et al. 1967
type strain of Corynebacterium glutamicum: ATCC:13032, CCUG:27702, CIP:82.8, DSM:20300, HAMBI:2052, IFO:12168, JCM:1318, BCCM/LMG:3730, NBRC:12168, NRRL:B-2784
homotypic synonym:
"Micrococcus glutamicus" Kinoshita et al. 1958, effective name 1)
Corynebacterium glutamicum (Kinoshita et al. 1958) Abe et al. 1967 emend. Nouioui et al. 2018, emended name 2) in [Nouioui I et al. (2018c)]
includes:
Arthrobacter sp. NCIB 9666
Brevibacterium sp. ATCC 19165
Microbacterium sp. ATCC 15283
NCBI BLAST name: high G+C Gram-positive bacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
heterotypic synonym
Brevibacterium chang-fua
heterotypic synonym
Brevibacterium glutamigenes
heterotypic synonym
Brevibacterium lactofermentum
heterotypic synonym
Brevibacterium saccharolyticum
heterotypic synonym
Brevibacterium seonmiso
heterotypic synonym
Brevibacterium taipei
heterotypic synonym
Brevibacterium thiogenitalis
heterotypic synonym
Corynebacterium lactofermentum
heterotypic synonym
Micrococcus maripuniceus
heterotypic synonym
Brevibacterium divaricatum Su and Yamada 1960 (Approved Lists 1980), nom. approb. 3)
type strain of Brevibacterium divaricatum: ATCC:14020, JCM:1307
heterotypic synonym
Corynebacterium lilium Lee and Good 1963 (Approved Lists 1980), nom. approb. 4)
type strain of Corynebacterium lilium: ATCC:15990, DSM:20137, JCM:1321, BCCM/LMG:3654
heterotypic synonym
Corynebacterium crenatum
homotypic synonym:
"Corynebacterium crenatum" Chen and Li 1975, effective name 5) in [Chen Q & Li LG (1975)]
type strain of "Corynebacterium crenatum": personal::AS 1.542, CICC:20662
Lineage( full )
cellular organisms; Bacteria; Terrabacteria group; Actinomycetota; Actinomycetes; Mycobacteriales; Corynebacteriaceae; Corynebacterium
   Entrez records   
Database name Subtree links Direct links Links from type
Nucleotide 35,600 34,106 114
Protein 207,526 163,546 -
Structure 245 117 -
Genome 2 1 -
Popset 12 12 -
Conserved Domains 3 3 -
GEO Datasets 1,753 1,494 -
PubMed Central 5,784 5,778 -
Gene 34,147 6,294 -
SRA Experiments 935 673 -
Protein Clusters 2,200 2,200 -
Identical Protein Groups 49,469 46,657 -
BioProject 323 185 -
BioSample 992 652 356
Assembly 88 71 -
PubChem BioAssay 28 25 -
Taxonomy 14 1 -

Notes:

Comments and References:
Nouioui I et al. (2018c), doi: 10.3389/fmicb.2018.02007, PubMed: abstract
Nouioui, I., Carro, L., García-López, M., Meier-Kolthoff, J.P., Woyke, T., Kyrpides, N.C., Pukall, R., Klenk, H.-P., Goodfellow, M., and Göker M. "Genome-based taxonomic classification of the phylum Actinobacteria." Front. Microbiol. (2018) 9:2007.
Chen Q & Li LG (1975)
Chen, Q., and Li, L.-G. "Studies on L-glutamic acid producing bacteria AS 1.542. I. Identification of strain AS 1.542." Acta Microbiologica Sinica (Wei Sheng Wu Xue Bao) (1975) 15(2):119-124 (in Chinese with English abstract).
'Corynebacterium lactofermentum' = Corynebacterium glutamicum
Amador et al. (1999) propose the transfer of "Brevibacterium lactofermentum" to "Corynebacterium lactofermentum" on the basis of studies involving "B. lactofermentum" strains ATCC 13869 and DSM 20412. However, the ATCC catalogue of strains lists ATCC 13869 as C. glutamicum. Moreover, Liebl et al. (1991) have previously transferred "B. lactofermentum" strains DSM 20412 and DSM 1412 to C. glutamicum.
Corynebacterium crenatum
'Corynebacterium crenatum' is described as a subspecies of Corynebacterium glutamicum.
Abe S et al. (1967)
Abe, S., Takayama, K., and Kinoshita, S. "Taxonomical studies on glutamic acid-producing bacteria." J. Gen. Appl. Microbiol. (1967) 13:279-301. [No PubMed record available.]
Amador E et al. (1999)
Amador, E., Castro, J.M., Correia, A., and Martin, J.F. "Structure and organization of the rrnD operon of 'Brevibacterium lactofermentum': analysis of the 16S rRNA gene." Microbiology (1999) 145:915-924.
Fukuda H (1971) (Brevibacterium thiogenitalis)
Fukuda H. "Method for producing L-glutamic acid." U.S. Pat. 3,623,951 dated Nov. 30, 1971.
Liebl W et al. (1991)
Liebl, W., Ehrmann, M., Ludwig, W., Schleifer, K.H. "Transfer of Brevibacterium divaricatum DSM 20297T, "Brevibacterium flavum" DSM 20411, "Brevibacterium lactofermentum" DSM 20412 and DSM 1412, and Corynebacterium glutamicum and their distinction by rRNA gene restriction patterns." Int. J. Syst. Bacteriol. (1991) 41:255-260.
Okumura S et al. (1962) (Brevibacterium saccharolyticum)
Okumura, S. et al. "Studies on the L-glutamic acid fermentation. Part I. The new bacteria of the genus Brevibacterium isolated from the nature to produce L-glutamic acid." J. Agric. Chem. Soc. Jpn. (1962) 36:141-159. [No PubMed record available.]
Oberreuter H et al. (2002b)
Oberreuter, H., Charzinski, J., and Scherer, S. "Intraspecific diversity of Brevibacterium linens, Corynebacterium glutamicum and Rhodococcus erythropolis based on partial 16S rDNA sequence analysis and Fourier-transform infrared (FT-IR) spectroscopy." Microbiology (2002) 148:1523-1532.
Skerman VBD et al. (1980) (Corynebacterium glutamicum)
Skerman, V.B.D., McGowan, V., and Sneath, P.H.A. (editors): "Approved lists of bacterial names." Int. J. Syst. Bacteriol. (1980) 30:225-420. [No PubMed record available.]
Su Y & Yamada K (1960)
Su, Y., and Yamada, K.: Bull. Agric. Chem. Soc. Japan (1960) 24:69-74. [No PubMed record available.]
Zobell CE & Upham HC (1944) (Micrococcus maripuniceus)
Zobell, C.E., and Upham, H.C. "A list of marine bacteria including descriptions of sixty new species." Bull. Scripps Inst. Oceanogr. (1944) 5: 239-292. [No PubMed record available.]
Brevibacterium flavum & lactofermentum
"The Prokaryotes" (2nd edition) p. 1158 discusses the nomenclatural status of Brevibacterium flavum and Brevibacterium lactofermentum: "Their systematic classification has not been clarified but numerous data exist [citations listed below] indicating their close relatedness, if not identity, with Corynebacterium glutamicum: C. lilium, Brevibacterium flavum, B. lactofermentum, and B. divaricatum. Of the nomenclatural species B. flavum, B. lactofermentum, B. divaricatum, only B. divaricatum is included in the Approved Lists of Bacterial Names (Skerman et al., 1980), and none is a true member of the genus Brevibacterium. Therefore, data obtained with these species will be included with the discussion of the properties of Corynebacterium glutamicum." Abe et al. (1967) J. Gen. Appl. Microbiol. 13:279-301. Suzuki et al. (1981) Int. J. Syst. Bacteriol. 31:131-138. Minnikin et al. (1978) in "Coryneform bacteria" Academic Press, London.

External Information Resources (NCBI LinkOut)

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Corynebacterium glutamicum meta-databases BacDive
10 records from this provider organism-specific BioCyc
Brevibacterium divaricatum Su and Yamada 1960 (Approved Lists 1980) taxonomy/phylogenetic Encyclopedia of life
33 records from this provider organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Corynebacterium glutamicum culture/stock collections Global Catalogue of Microorganisms
Related Immune Epitope Information gene/protein/disease-specific Immune Epitope Database and Analysis Resource
23 records from this provider organism-specific Integrated Microbial Genomes
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
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Information from sequence entries

Organism modifiers

To hide organism modifiers click here
strain
01 [1] 0911MAR13M2 [1] 0911MAR21U2 [1] 1006 [1 1 114]
1014 [1 5 11] 115 [1 44] 116 [1 39] 13032 [1 3]
14B [1] 1542 [1 2] 21253 [1 1] 22220 [1 3 1 7]
22243 [4 1 20] 2262 [1 2] 227 [1 2 1] 3292 [1]
35 [1 2 43] 36 [1 40] 37 [1 46] 38 [1 48]
39 [1 42 1] 50 [1 47] 51 [1 44] 52 [1 41]
53 [1 44] 617 [1 1 236 2799] 8-193 [3 3] 971.1 [1 1]
AAE10 [1] ACCC16522 [3 1] AJ12036 [3 8] AJ1511 [1 2 3015]
ALK052 [1 1] ALK062 [1 1] ALK063 [1 1] ALK066 [1 1]
ALK067 [1 1] ALK068 [1 1] ALK415 [1 1] ALK510 [1 1]
ALK612 [1 1] ALK614 [1 1] ALK617 [1 1] ALK628 [1 1]
ALK632 [1 1] AR1 [1 3 5 2761] AS 1.299 [1 1 78 2762] AS 1.542 [1 1 80 2952]
AS019 [16 23] AS019 (ATCC13059) [1 3] AS019E12 [1 6 5 1] ASO 19 [2 2]
ASO19 [18 26] ASO19 (ATCC13059) [1 2] ASO19E12 [1 1] ATCC 13 032 [3 3]
ATCC 13032 [68 344 70 6205 108 12731 386 37] ATCC 13032 (wild type) [11 2] ATCC 13058 [3 1 1] ATCC 13059 [3 1 3]
ATCC 13059 AS019 [1 1] ATCC 13060 [1 1] ATCC 13232 [1 1] ATCC 13286 [1 1]
ATCC 13287 [1 1 4 1] ATCC 13655 [2 1 2] ATCC 13744 [2 2 1] ATCC 13745 [1 1 1]
ATCC 13746 [1 1] ATCC 13747 [1 1] ATCC 13869 [1 6 27 2923] ATCC 13870 [1 1 74 3029]
ATCC 14 752 [3 3] ATCC 14017 [2 2 1] ATCC 14020 [1 1 1] ATCC 14066 [1 1]
ATCC 14067 strain ATCC 14067 [2 2 13 2 5971] of Corynebacterium glutamicum ATCC 14067 ATCC 14068 [1 1 1] ATCC 14399 [1] ATCC 14747 [1 1 1]
ATCC 14751 [1 1 1] ATCC 14752 [1 1 1] ATCC 14915 [2 2 1] ATCC 14997 [1 2 20]
ATCC 14999 [1 1] ATCC 15025 [1 1] ATCC 15243 [1 1 1] ATCC 15283 [1 1]
ATCC 15354 [1 1 1] ATCC 15990 [1 1] ATCC 17965 [5 1 7] ATCC 17966 [1 1 1]
ATCC 19165 [1] ATCC 19223 [1 1 1] ATCC 19240 [2 2 1] ATCC 21086 [1 3 1]
ATCC 21127 [3] ATCC 21179 [1 1] ATCC 21253 [2 2] ATCC 21341 [1 1 1]
ATCC 21492 [1 1] ATCC 21493 [1 1 116 2978] ATCC 21517 [1 1] ATCC 21573 [1 1 2 2735]
ATCC 21645 [1 1 1] ATCC 21799 [1 1 4 3081] ATCC 21831 [1 4 2785] ATCC 21850 [3 1]
ATCC 31808 [1 1 1] ATCC 31830 [3 1 32] ATCC 31831 [1 1 10 3116] ATCC 31832 [1 3 1 7]
ATCC 31833 [1 1] ATCC#13059 strain ATCC 13059 [3 1 3] ATCC13032 [2 13 10 18 6] ATCC13060 [1 9]
ATCC13869 [6 9 2] ATCC14752 [1 1] ATCC17965 [1 1] ATCC21792 [1]
ATULGPJ_01B [1] AVME02 [1] AzoM5 [1] B Co 03.31 [1 96 2933]
B253 [1 1 4 2767] B37 [1] B413 [1 1 26 2763] B414 [1 1 2 2758]
B415 [1 1 24 2761] B45 [1] B533 [1 1 26 2765] BCA [1 1 2]
BE [1 1 2 3012] Bl15 [2 3] C1 [1 1 1 2 2606] CAU4561 [1 1]
CD945 [3 5] CECT 79 [1 1] CEMTC_7001 [1] CEMTC_7004 [1]
CG-002 [1] CGMCC1.15647 [1 1 6] CICC 20219 [2 2] CICC10031 [1]
CICC10038 [1] CICC10043 [1] CICC10045 [1] CICC10046 [1]
CICC10056 [1] CICC10057 [1] CICC10064 [1 1 2 2770] CICC10065 [1 1 37 2788]
CICC10109 [1] CICC10111 [1] CICC10112 [2] CICC10117 [1]
CICC10119 [1] CICC10120 [1] CICC10121 [1] CICC10123 [1]
CICC10178 [1 1 27 2763] CICC10179 [1] CICC10226 [1] CICC20042 [1 1 26 2977]
CICC20824 [1 1 40 2979] CICC21721 [1 1 24 2762] CICC23603 [1 1 32 2766] CICC23604 [1 1 24 2765]
CICCHLJ Q91 [1 1] CN6 [1 9] CP [1 2 4 2897 6] CR101 [1 2 2 2814 1]
CS176 [1 1 229 2845 1] Cg21420 [1 1 2 2921] D-3 [1] DSM 1412 [1 2 28]
DSM 20137 [1 1 2 2 1] DSM 20163 [1 1] DSM 20300T [1] DSM 20301 [1 1]
DSM 20412 [2] DSM 20598 [1 1 1] DSM 46307 [1 1 1] DSM1412 [1 1]
DSMZ 20301 strain DSM 20301 [1 1] DT [1 1] F12L2 [1 1] F13AF3 [1 1]
G32 [1] GXNNSY20210502-16-16S [1] HA [1 1 3015] HN2650 [1 1]
I15B [1] IAM 12435T [1] IFBG MB8 [1] IIB625 [1]
INSPDST06 [1] JARS150 [1 1] JCM 1318 [1 1] JCM1321 [1]
JH41 [1 2 2765] JH41 parent [1 2 2756] JLM319 [2 1] JNPH5-8 [1 1]
JZ15 [2 2 1] KH42 [1] KJC112 [1] KY 10755 [1 1]
KY9611 [1 2] LEGU1 [1 1 38] LP-6 [2 9 1 49] M6595 [2]
MH20-22B [15 1 1] MJ233 [2 19] MRL_H [2] N24 strain N24 [1 3642 4 3197 1] of Corynebacterium suranareeae
NCIB 10025 [1] NCIB 9666 [1] NCIM2168 [1 1] NCIMB 10025(type strain) [1]
NCT148 [1] NCT928 [1] On10 [1] PWW15 [1]
R [1 1 8 1 48 3819] R127 [2 7] RCB958 [1 1] RES167 [17 1 2 51]
RS1 [1 1] SL6 [1] SYPA 5-1 [1 7] SYPA 5-5 [1 1 457 1]
SYPA5-5 [2 2] SYPS-062 [1 1 80 2857] SYPS-062-33a [1 1 102] T250 (ATCC 31830) [1 3]
T27 [1] T6-13 [1 1 66 2920] TCCC11822 [1 2 2883] TCCC27018 [1]
TCCC27021 [1] TCCC27025 [1] TCCC27026 [1] TCCC27030 [1]
TCCC27034 [1] TN15 [1] TN3 [1] TQ2223 [1 2 2953]
TUTXS-03 [1] TWB5 [1] USDA-ARS-USMARC-56828 [1 4 2897] WA4 [1]
WM001 [1 1 2] WS1863 [1] WS1912 [1] XV [2 4 2886 6]
YI [1 1 2 2993] cg1 [1] cg2 [1] cg3 [1]
cg4 [1] cg5 [1] cg6 [1] cg7 [1]
ssp. melassecola, ATCC 17965 [1 1] type strain: DSM20300 [1] wild-type ATCC31833 [1 1]
isolate
0911MAR13M2 [1] 0911MAR21U2 [1] ATCC 13032 [56 1 1] ATCC 13869 [1 1]
ATCC17965 [2 4] AV1gS9mjuQ_bin.24.MAG [360] BM85 [1] HN30 [1 1]
M180a [1] MJ233 [1 1] MUTANTE 14 [1 1] MUTANTE 16 [1 1]
MUTANTE 31 [1 1] MUTANTE 38 [1 1] MUTANTE 50 [1 1] MUTANTE 54 [1 1]
NW539B [1 1] S36M_Sa_9 [1 1] TK3600 [1 1] inducible phage particle phiGA1 (Sonnen 1990) [1]
inducible phage particle phiGA1 (Sonnen et al. 1990) [2] plasmid pXZ10142 [2 5]
nat-host
Bos taurus [1] Chaetophractus villosus [1]
synonym
Brevibacterium flavum [1 8]
culture-collection
ATCC:13032 [8 15 5932 8] ATCC:13287 [1 3 3] ATCC:13869 [2 9 2890] ATCC:13870 [1 74 3029]
ATCC:14067 [2 8 5947] ATCC:21493 [1 116 2978] ATCC:21573 [1 2 2735] ATCC:21799 [2 3079]
ATCC:31830 [2 31] ATCC:31831 [9 3115] ATCC:31833 [1 1] CGMCC:1.15647 [1 6]
CGMCC:11425 [4 2897] DSM:1412 [1 2 28]

Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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