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Taxonomy browser (Mycobacterium tuberculosis complex)

Mycobacterium tuberculosis complex

Taxonomy ID: 77643 (for references in articles please use NCBI:txid77643)
current name
Mycobacterium tuberculosis complex
equivalent:
Mycobacterium complex
NCBI BLAST name: high G+C Gram-positive bacteria
Rank: species group
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Bacteria; Terrabacteria group; Actinomycetota; Actinomycetes; Mycobacteriales; Mycobacteriaceae; Mycobacterium
   Entrez records   
Database name Subtree links Direct links
Nucleotide 1,460,897 103
Protein 20,283,158 2,908
Structure 3,335 -
Genome 10 -
Popset 489 53
Conserved Domains 13 7
GEO Datasets 7,824 -
PubMed Central 88,937 844
Gene 152,476 -
SRA Experiments 211,244 272
GEO Profiles 22,220 -
Protein Clusters 4,039 1,571
Identical Protein Groups 818,283 2,907
BioProject 4,345 8
BioSample 222,512 251
Assembly 7,712 -
PubChem BioAssay 10,952 -
Taxonomy 3,061 1

Comments and References:

Mycobacterium tuberculosis complex
Mycobacterium marinum and Mycobacterium ulcerans are the species most closely related to the Mycobacterium tuberculosis complex.
Fabre M et al. (2004)
Fabre, M., Koeck, J.L., Le Fleche, P., Simon, F., Herve, V., Vergnaud, G., and Pourcel, C. "High genetic diversity revealed by variable-number tandem repeat genotyping and analysis of hsp65 gene polymorphism in a large collection of 'Mycobacterium canettii' strains indicates that the M. tuberculosis complex is a recently emerged clone of 'M. canettii'." J. Clin. Microbiol. (2004) 42:3248-3255.
Riojas MA et al. (2018)
Riojas, M.A., McGough, K.J., Rider-Riojas, C.J., Rastogi, N., and Hazbon, M.H. "Phylogenomic analysis of the species of the Mycobacterium tuberculosis complex demonstrates that Mycobacterium africanum, Mycobacterium bovis, Mycobacterium caprae, Mycobacterium microti and Mycobacterium pinnipedii are later heterotypic synonyms of Mycobacterium tuberculosis." Int. J. Syst. Evol. Microbiol. (2018) 68:324-332.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Mycobacterium tuberculosis complex taxonomy/phylogenetic Lifemap
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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