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Taxonomy browser (Mycobacterium pseudoshottsii)

Mycobacterium pseudoshottsii

Taxonomy ID: 265949 (for references in articles please use NCBI:txid265949)
current name
Mycobacterium pseudoshottsii Rhodes et al. 2005 in [Rhodes MW et al. (2005)]
type strain of Mycobacterium pseudoshottsii: ATCC:BAA-883, JCM:15466, NCTC:13318, personal::L15, DSM:45108
homotypic synonym:
Mycobacterium pseudoshottsii Rhodes et al. 2005 emend. Nouioui et al. 2018, emended name 1) in [Nouioui I et al. (2018c), List of Changes in Taxonomic Opinion No. 29 (2019)]
NCBI BLAST name: high G+C Gram-positive bacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Bacteria; Terrabacteria group; Actinomycetota; Actinomycetes; Mycobacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium ulcerans group
   Entrez records   
Database name Subtree links Direct links Links from type
Nucleotide 1,335 812 993
Protein 25,621 14,800 -
Genome 1 1 -
Popset 8 8 -
PubMed Central 38 38 -
Gene 2 1 -
SRA Experiments 22 22 -
Protein Clusters 23 23 -
Identical Protein Groups 14,218 11,365 -
BioProject 13 11 -
BioSample 24 22 4
Assembly 6 4 -
Taxonomy 2 1 -

Notes:

Comments and References:

Rhodes MW et al. (2005), PubMed: abstract
Rhodes, M.W., Kator, H., McNabb, A., Deshayes, C., Reyrat, J.-M., Brown-Elliott, B.A., Wallace, R. Jr., Trott, K.A., Parker, J.M., Lifland, B., Osterhout, G., Kaattari, I., Reece, K., Vogelbein, W., and Ottinger, C.A. "Mycobacterium pseudoshottsii sp. nov., a slowly growing chromogenic species isolated from Chesapeake Bay striped bass (Morone saxatilis)." Int. J. Syst. Evol. Microbiol. (2005) 55(3):1139-1147. Published online 23 December 2004. doi:10.1099/ijs.0.63343-0
Nouioui I et al. (2018c), doi: 10.3389/fmicb.2018.02007, PubMed: abstract
Nouioui, I., Carro, L., García-López, M., Meier-Kolthoff, J.P., Woyke, T., Kyrpides, N.C., Pukall, R., Klenk, H.-P., Goodfellow, M., and Göker M. "Genome-based taxonomic classification of the phylum Actinobacteria." Front. Microbiol. (2018) 9:2007.
List of Changes in Taxonomic Opinion No. 29 (2019), PubMed: abstract
Oren, A., and Garrity, G.M. "Notification of changes in taxonomic opinion previously published outside the IJSEM." Int. J. Syst. Evol. Microbiol. (1969) 69(1):13-32.
Pidot SJ et al. (2010), other link:https://0-www-ncbi-nlm-nih-gov.brum.beds.ac.uk/pmc/articles/PMC2910673/
Pidot, S.J., Asiedu, K., Käser, M., Fyfe, J.A., and Stinear, T.P. "Mycobacterium ulcerans and other mycolactone-producing mycobacteria should be considered a single species." PLoS Negl. Trop. Dis. (2010) 4(7):e663.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Mycobacterium pseudoshottsii meta-databases BacDive
Mycobacterium pseudoshottsii Rhodes et al. 2005 taxonomy/phylogenetic Encyclopedia of life
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Mycobacterium pseudoshottsii culture/stock collections Global Catalogue of Microorganisms
8078705183: Mycobacterium pseudoshottsii NJB1907-Z4 organism-specific Integrated Microbial Genomes
Mycobacterium pseudoshottsii taxonomy/phylogenetic Lifemap
Mycobacterium pseudoshottsii Rhodes, Kator, McNabb, Deshayes, Reyrat, Brown-Elliott, Wallace, Trott, Parker, Lifland, Osterhout, Kaattari, Reece, Vogelbein & Ottinger, 2005 taxonomy/phylogenetic Ocean Biogeographic Information System
Mycobacterium pseudoshottsii Rhodes, Kator, McNabb, Deshayes, Reyrat, Brown-Elliott, Wallace, Trott, Parker, Lifland, Osterhout, Kaattari, Reece, Vogelbein & Ottinger, 2005 taxonomy/phylogenetic World Register of Marine Species
Wikipedia taxonomy/phylogenetic iPhylo
Notes:
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A list of our current non-bibliographic LinkOut providers can be found here.

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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