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Taxonomy browser (Clostridium merdae)

Clostridium merdae

Taxonomy ID: 1958780 (for references in articles please use NCBI:txid1958780)
current name
"Clostridium merdae" Ndongo et al. 2017, effective name 1)
type strain of "Clostridium merdae": CSUR:P2953, DSM:103669, personal::Marseille-P2953
includes:
Clostridium sp. Marseille-P2953
NCBI BLAST name: firmicutes
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Bacteria; Terrabacteria group; Bacillota; Clostridia; Eubacteriales; Clostridiaceae; Clostridium
   Entrez records   
Database name Direct links Links from type
Nucleotide 23 12
Protein 2,535 -
Genome 1 -
PubMed Central 7 -
Identical Protein Groups 2,613 -
BioProject 3 -
BioSample 2 1
Assembly 2 -
Taxonomy 1 -

Notes:

Comments and References:

Publisher's Note. Expression of Concern., doi:10.1016/j.nmni.2023.101196
Publisher'sNote. Expression of Concern. New Microbes New Infect. (2024) 56:101196.
Ndongo S et al. (2017c)
Ndongo, S., Cadoret, F., Dubourg, G., Delerce, J., Fournier, P.-E., Raoult, D., and Lagier, J.-C. "'Collinsella phocaeensis' sp. nov., 'Clostridium merdae' sp. nov., 'Sutterella massiliensis' sp. nov., 'Sutturella (sic) timonensis' sp. nov., 'Enorma phocaeensis' sp. nov., 'Mailhella massiliensis' gen. nov., sp. nov., 'Mordavella massiliensis' gen. nov., sp. nov. and 'Massiliprevotella massiliensis' gen. nov., sp. nov., 9 new species isolated from fresh stool samples of healthy French patients." New Microbes New Infect. (2017) 17:89-95.
Alou MT et al. (2018)
Alou, M.T., Ndongo, S., Fregere, L., Labas, N., Andrieu, C., Richez, M., Couderc, C., Baoudoin, J.-P., Abrahao, J., Brah, S., Diallo, A., Sokhna, C., Cassir, N., La Scola, B., Cadoret, F., and Raoult, D. "Taxonogenomic description of four new Clostridium species isolated from human gut: 'Clostridium amazonitimonense', 'Clostridium merdae', 'Clostridium massilidielmoense' and 'Clostridium nigeriense'." New Microbes New Infect. (2018) 21:128-139.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Clostridium merdae meta-databases BacDive
GOLD: Go0454974 organism-specific Genomes On Line Database
2791355326: Clostridium merdae Marseille-P2953 organism-specific Integrated Microbial Genomes
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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