Taxonomy browser (Mycobacterium avium subsp. paratuberculosis)

Entrez

PubMed

Nucleotide

Protein

Search for as lock

levels using filter:

Taxonomy browser (Mycobacterium avium subsp. paratuberculosis)

Mycobacterium avium subsp. paratuberculosis

Taxonomy ID: 1770 (for references in articles please use NCBI:txid1770)

current name

Mycobacterium avium subsp. paratuberculosis (Bergey et al. 1923) Thorel et al. 1990

type strain of Mycobacterium avium subsp. paratuberculosis: ATCC :19698, CIP:103963, DSM :44133

homotypic synonym:

"Bacterium paratuberculosis" (Bergey et al. 1923) Miessner and Berge in Kolle and Wasserman 1929, effective name¹⁾

"Bacillus paratuberculosis" (Bergey et al. 1923) Krasil'nikov 1941, effective name²⁾

Mycobacterium paratuberculosis Bergey et al. 1923 (Approved Lists 1980), nom. approb.³⁾

equivalent:

Mycobacterium avium paratuberculosis

NCBI BLAST name: high G+C Gram-positive bacteria
Rank: subspecies
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:

heterotypic synonym

"Darmtuberculose" Johne and Frothingham 1895, effective name⁴⁾

heterotypic synonym

"Mycobacterium enteritidis" Lehmann in Lehmann and Neumann 1927, effective name⁵⁾

heterotypic synonym

"Mycobacterium johnei" Francis 1943, effective name⁶⁾

Lineage( full ): cellular organisms; Bacteria; Terrabacteria group; Actinomycetota; Actinomycetes; Mycobacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium avium complex (MAC); Mycobacterium avium

Entrez records
Database name	Subtree links	Direct links	Links from type
Nucleotide	62,803	30,239	1,160
Protein	797,480	746,978	-
Structure	27	15	-
Genome	1	1	-
Popset	63	63	-
GEO Datasets	122	82	-
PubMed Central	668	668	-
Gene	9,510	-	-
SRA Experiments	1,918	1,888	-
Identical Protein Groups	35,062	16,719	-
BioProject	91	55	-
BioSample	1,964	1,917	3
Assembly	227	178	-
PubChem BioAssay	38	38	-
Taxonomy	31	1	-

Notes:

1) This taxonomic name has been effectively published but not validly published under the rules of the International Code of Nomenclature of Prokaryotes (Bacteriological Code).
2) This taxonomic name has been effectively published but not validly published under the rules of the International Code of Nomenclature of Prokaryotes (Bacteriological Code).
3) 'Nom. approb.' (= nomen approbatum, = approved name) refers to a name which is included in the Approved Lists of Bacterial Names.
4) This taxonomic name has been effectively published but not validly published under the rules of the International Code of Nomenclature of Prokaryotes (Bacteriological Code).
5) This taxonomic name has been effectively published but not validly published under the rules of the International Code of Nomenclature of Prokaryotes (Bacteriological Code).
6) This taxonomic name has been effectively published but not validly published under the rules of the International Code of Nomenclature of Prokaryotes (Bacteriological Code).

Comments and References:

Skerman VBD et al. (1980) (Mycobacterium paratuberculosis)

Skerman, V.B.D., McGowan, V., and Sneath, P.H.A. (editors). "Approved lists of bacterial names." Int. J. Syst. Bacteriol. (1980) 30:225-420.

Thorel MF et al. (1990)

Thorel, M.F., Krichevsky, M., and Levy-Frebault, V.V. "Numerical taxonomy of mycobactin-dependent mycobacteria, emended description of Mycobacterium avium, and description of Mycobacterium avium subsp. avium subsp. nov., Mycobacterium avium subsp. paratuberculosis subsp. nov., and Mycobacterium avium subsp. silvaticum subsp. nov." Int. J. Syst. Bacteriol. (1990) 40:254-260.

External Information Resources (NCBI LinkOut)

LinkOut	Subject	LinkOut Provider
Mycobacterium avium subsp. paratuberculosis	meta-databases	BacDive
14 records from this provider	organism-specific	BioCyc
Mycobacterium avium subsp. paratuberculosis (Bergey et al. 1923) Thorel et al., 1990	taxonomy/phylogenetic	Encyclopedia of life
4 records from this provider	organism-specific	Genomes On Line Database
Show Biotic Interactions	taxonomy/phylogenetic	Global Biotic Interactions
Mycobacterium avium subsp. paratuberculosis	culture/stock collections	Global Catalogue of Microorganisms
Related Immune Epitope Information	gene/protein/disease-specific	Immune Epitope Database and Analysis Resource
11 records from this provider	organism-specific	Integrated Microbial Genomes
Wikipedia	taxonomy/phylogenetic	iPhylo

Notes:: Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

Show organism modifiers

Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.

Comments and questions to info@ncbi.nlm.nih.gov

[Help]

[Search]

[NLM NIH]

[Disclaimer]