7AOI: Trypanosoma brucei mitochondrial ribosome large subunit assembly intermediate

PDB ID: 7AOIDownload
MMDB ID: 198422
PDB Deposition Date: 2020/10/14
Updated in MMDB: 2021/02
Experimental Method:
electron microscopy
Resolution: 3.5  Å
Source Organism:
Similar Structures:
Biological Unit for 7AOI: 83-meric; determined by author
Molecular Components in 7AOI
Label Count Molecule
Proteins (82 molecules)
1
Bl28m
Molecule annotation
1
Ul29m
Molecule annotation
1
Ul30m
Molecule annotation
1
Bl32m
Molecule annotation
1
Bl33m
Molecule annotation
1
Ribosomal Protein L3 Mitochondrial, Putative
Molecule annotation
1
Ribosomal Protein L4/l1 Family
Molecule annotation
1
Ribosomal_l9 Domain-containing Protein
Molecule annotation
1
Ribosomal Protein L11,ul11m
Molecule annotation
1
50S Ribosomal Protein L13
Molecule annotation
1
Ribosomal_l18e/l15p Domain-containing Protein
Molecule annotation
1
50S Ribosomal Protein L17
Molecule annotation
1
Bl19m
Molecule annotation
1
Bl20m
Molecule annotation
1
Ribosomal Protein L21
Molecule annotation
1
Ribosomal Protein L22p/l17e
Molecule annotation
1
Ribosomal Protein L23
Molecule annotation
1
Ul24m
Molecule annotation
1
Ml41
Molecule annotation
1
Ml42
Molecule annotation
1
Mitochondrial Ribosomal Protein L51 / S25 / Ci-b8 Domain Containing Protein
Molecule annotation
1
Ml49
Molecule annotation
1
Ml52
Molecule annotation
1
Ml53
Molecule annotation
1
Ml63
Molecule annotation
1
Ml64,ml64
Molecule annotation
1
Ml67
Molecule annotation
1
Ml68,ml68,ml68
Molecule annotation
1
Ml70
Molecule annotation
1
Ml71
Molecule annotation
1
Tetratricopeptide Repeat
Molecule annotation
1
Ml74
Molecule annotation
1
Mitochondrial RNA Binding Complex 1 Subunit
Molecule annotation
1
Ml76
Molecule annotation
1
Chaperone Protein Dnaj, Putative,ml77,chaperone Protein Dnaj, Putative
Molecule annotation
1
Ml78
Molecule annotation
1
Ml80
Molecule annotation
1
Ml81
Molecule annotation
1
Peptidyl-prolyl Cis-trans Isomerase
Molecule annotation
1
Ml84
Molecule annotation
1
Ml85
Molecule annotation
1
Ml86
Molecule annotation
1
Ml87
Molecule annotation
1
Ml89
Molecule annotation
1
LIM Domain Containing Protein,ml90
Molecule annotation
1
Peptidyl-prolyl Cis-trans Isomerase
Molecule annotation
1
Ml93
Molecule annotation
1
Ml94
Molecule annotation
1
Ml95
Molecule annotation
1
Ml98
Molecule annotation
1
Ml99
Molecule annotation
1
Ml100,ml100
Molecule annotation
1
Unk1
Molecule annotation
1
Unk2
Molecule annotation
1
Unk3
Molecule annotation
1
Unk4
Molecule annotation
1
Unk5
Molecule annotation
1
Unk6/mt-laf15_2
Molecule annotation
1
Unk7
Molecule annotation
1
Unk8
Molecule annotation
1
Unk9
Molecule annotation
1
Unk10
Molecule annotation
1
Unk11
Molecule annotation
1
Mt-laf7,mt-laf7
Molecule annotation
1
Dead-box Helicase, Putative,mt-laf2
Molecule annotation
1
Mt-laf4
Molecule annotation
2
Acyl Carrier Protein
Molecule annotation
1
Mt-laf15_1
Molecule annotation
1
50S Ribosomal Protein L14
Molecule annotation
1
Mt-laf8
Molecule annotation
1
Mt-laf14
Molecule annotation
1
RNA Uridylyltransferase
Molecule annotation
1
Gtp-binding Protein, Putative,mt-enga
Molecule annotation
1
Complex1-lyr-like
Molecule annotation
1
Mt-laf12
Molecule annotation
1
Spou rRNA Methylase Family
Molecule annotation
1
Pseudouridylate Synthase, Putative
Molecule annotation
1
Gtp-binding Protein
Molecule annotation
1
Lipase (Class 3)
Molecule annotation
1
Ml101
Molecule annotation
1
Mt-laf19
Molecule annotation
Nucleotide(1 molecule)
1
Mt-lsu rRNA
Molecule annotation
Chemicals and Non-standard biopolymers (10 molecules)
1
1
FE2/S2 (INORGANIC) CLUSTERFE2/S2 (INORGANIC) CLUSTER
2
1
NICOTINAMIDE-ADENINE-DINUCLEOTIDENICOTINAMIDE-ADENINE-DINUCLEOTIDE
3
4
ZINC IONZINC ION
4
1
MAGNESIUM IONMAGNESIUM ION
5
1
ADENOSINE-5'-DIPHOSPHATEADENOSINE-5'-DIPHOSPHATE
6
2
GUANOSINE-5'-TRIPHOSPHATEGUANOSINE-5'-TRIPHOSPHATE
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303