5ZDZ: Hairpin Forming Complex, RAG1/2-Nicked 12RSS/23RSS complex in Ca2+

PDB ID: 5ZDZDownload
MMDB ID: 161293
PDB Deposition Date: 2018/2/25
Updated in MMDB: 2018/05
Experimental Method:
x-ray diffraction
Resolution: 2.8  Å
Source Organism:
synthetic construct▼
Similar Structures:
Biological Unit for 5ZDZ: hexameric; determined by author and by software (PISA)
Molecular Components in 5ZDZ
Label Count Molecule
Proteins (3 molecules)
1
Mouse Rag1
Molecule annotation
1
Mouse Rag2
Molecule annotation
1
Hmgb1 A-B BOX
Molecule annotation
Nucleotides(3 molecules)
1
DNA (30-mer)
Molecule annotation
1
DNA (39-mer)
Molecule annotation
1
DNA Chain M
Molecule annotation
Chemicals and Non-standard biopolymers (7 molecules)
1
2
CALCIUM IONCALCIUM ION
2
1
ZINC IONZINC ION
3
2
1,2-ETHANEDIOL1,2-ETHANEDIOL
4
2
POTASSIUM IONPOTASSIUM ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303