3BVT: GOLGI MANNOSIDASE II D204A catalytic nucleophile mutant complex with Methyl (alpha-D-mannopyranosyl)-(1->3)-S-alpha-D-mannopyranoside

PDB ID: 3BVTDownload
MMDB ID: 65234
PDB Deposition Date: 2008/1/7
Updated in MMDB: 2017/11
Experimental Method:
x-ray diffraction
Resolution: 1.3  Å
Source Organism:
Similar Structures:
Biological Unit for 3BVT: monomeric; determined by author and by software (PISA)
Molecular Components in 3BVT
Label Count Molecule
Protein (1 molecule)
1
Alpha-mannosidase 2
Molecule annotation
Chemicals and Non-standard biopolymers (8 molecules)
1
1
methyl 3-thio-alpha-D-mannopyranosidemethyl 3-thio-alpha-D-mannopyranoside
2
1
alpha-D-mannopyranosealpha-D-mannopyranose
3
1
2-acetamido-2-deoxy-beta-D-glucopyranose2-acetamido-2-deoxy-beta-D-glucopyranose
4
1
PHOSPHATE IONPHOSPHATE ION
5
1
ZINC IONZINC ION
6
1
(4R)-2-METHYLPENTANE-2,4-DIOL(4R)-2-METHYLPENTANE-2,4-DIOL
7
2
(4S)-2-METHYL-2,4-PENTANEDIOL(4S)-2-METHYL-2,4-PENTANEDIOL
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303