2YBE: The structure of the fully closed conformation of human PGK in complex with L-ADP, 3PG and the TSA aluminium tetrafluoride at 2.0 A resolution

PDB ID: 2YBEDownload
MMDB ID: 90107
PDB Deposition Date: 2011/3/7
Updated in MMDB: 2023/12
Experimental Method:
x-ray diffraction
Resolution: 2  Å
Source Organism:
Similar Structures:
Biological Unit for 2YBE: monomeric; determined by author and by software (PISA)
Molecular Components in 2YBE
Label Count Molecule
Protein (1 molecule)
1
Phosphoglycerate Kinase 1
(Gene symbol: PGK1)
Molecule annotation
Chemicals and Non-standard biopolymers (5 molecules)
1
1
MAGNESIUM IONMAGNESIUM ION
2
1
CHLORIDE IONCHLORIDE ION
3
1
L-ADENOSINE-5'-DIPHOSPHATEL-ADENOSINE-5'-DIPHOSPHATE
4
1
TETRAFLUOROALUMINATE IONTETRAFLUOROALUMINATE ION
5
1
3-PHOSPHOGLYCERIC ACID3-PHOSPHOGLYCERIC ACID
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303