|
Name |
Accession |
Description |
Interval |
E-value |
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
353-557 |
1.77e-09 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 60.16 E-value: 1.77e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528509307 353 IVGALVLLCVGSFFFSDDFDGTELSDQELLDKLAQENKQINILEAQIESQKEELDQA----LKMASQVHSTEKG--ALEN 426
Cdd:COG4942 4 LLLLALLLALAAAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALerriAALARRIRALEQElaALEA 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528509307 427 ENTKLKEQLSELPG-LKEELQMLRARVAELTKLTAEDLTQTIPDSDPPSTA-----------DSVPEEAEKHRDKKEELK 494
Cdd:COG4942 84 ELAELEKEIAELRAeLEAQKEELAELLRALYRLGRQPPLALLLSPEDFLDAvrrlqylkylaPARREQAEELRADLAELA 163
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 528509307 495 RQKALLEESRKRLEGMKKpswNKQGLRESLVEMQKRLSKQVEQLGKREDWKRKHKKEWGRKKE 557
Cdd:COG4942 164 ALRAELEAERAELEALLA---ELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAE 223
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
380-588 |
1.23e-07 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 55.53 E-value: 1.23e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528509307 380 ELLDKLAQENKQINILEAQIESQKEELDQALKMASQVHSTEKGALENENTKLKEQLSELPGLKEELQMLRARVAELTKlt 459
Cdd:PTZ00121 1381 DAAKKKAEEKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKK-- 1458
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528509307 460 AEDLTQTipdSDPPSTADSVPEEAEKHRdKKEELKRQKallEESRKRLEGMKKPSWNKQGLRESLVEMQKRlskQVEQLG 539
Cdd:PTZ00121 1459 AEEAKKK---AEEAKKADEAKKKAEEAK-KADEAKKKA---EEAKKKADEAKKAAEAKKKADEAKKAEEAK---KADEAK 1528
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 528509307 540 KREDwkrKHKKEWGRKKEHDWKKDEAEKGKEWKHGKDKRKEHLMKYKEE 588
Cdd:PTZ00121 1529 KAEE---AKKADEAKKAEEKKKADELKKAEELKKAEEKKKAEEAKKAEE 1574
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
384-588 |
2.34e-07 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 54.76 E-value: 2.34e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528509307 384 KLAQENKQINILEAQIESQK-EELDQA--LKMASQVHSTEKGALENENTKLKEQLSElpglkEELQMLRARVAELTKLTA 460
Cdd:PTZ00121 1528 KKAEEAKKADEAKKAEEKKKaDELKKAeeLKKAEEKKKAEEAKKAEEDKNMALRKAE-----EAKKAEEARIEEVMKLYE 1602
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528509307 461 EDLTQTIPDSDPPSTADSVPEEAEKHRDKKEELKRQKALLEESRKRLEGMKKPSWNKQGLRESLVEMQKRLSKQVEQLGK 540
Cdd:PTZ00121 1603 EEKKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKK 1682
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 528509307 541 REDWKRKHKKEWGRKKEHDWKKDEAEKGKEwkhgKDKRKEHLMKYKEE 588
Cdd:PTZ00121 1683 AEEDEKKAAEALKKEAEEAKKAEELKKKEA----EEKKKAEELKKAEE 1726
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
380-601 |
5.65e-07 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 53.61 E-value: 5.65e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528509307 380 ELLDKLAQENKQINILEAQIESQKEELDQALKMASQvhstEKGALENENTKLKEQLSELPGLKEELQMLRARVAELTKLT 459
Cdd:PTZ00121 1595 EEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEE----EKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKA 1670
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528509307 460 AEDLTQtipdsdppstADSVPEEAEKHRDKKEELKRQkallEESRKRLEGMKKPSWNKQGLRESLVEMQKRLSKQVEQLg 539
Cdd:PTZ00121 1671 EEDKKK----------AEEAKKAEEDEKKAAEALKKE----AEEAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEA- 1735
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 528509307 540 KREDWKRKHKKEWGRKKEHDWKKDEAEKGKEWKHGKDKRKEHLMKYKEEWDLNKDERRQERE 601
Cdd:PTZ00121 1736 KKEAEEDKKKAEEAKKDEEEKKKIAHLKKEEEKKAEEIRKEKEAVIEEELDEEDEKRRMEVD 1797
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
375-588 |
3.87e-06 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 50.52 E-value: 3.87e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528509307 375 ELSDQELLDKLAQENKQINILEAQIESQKEELDQALKMASQvhstEKGALENENTKLKEQLSELPGLKEELQMLRARVAE 454
Cdd:PTZ00121 1300 EKKKADEAKKKAEEAKKADEAKKKAEEAKKKADAAKKKAEE----AKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEE 1375
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528509307 455 LTKlTAEDLTQTipdSDPPSTADSVPEEAEKHRDKKEELKR---QKALLEESRKRLEGMKKPSWNKQGLRES--LVEMQK 529
Cdd:PTZ00121 1376 AKK-KADAAKKK---AEEKKKADEAKKKAEEDKKKADELKKaaaAKKKADEAKKKAEEKKKADEAKKKAEEAkkADEAKK 1451
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 528509307 530 R---------LSKQVEQLGKREDWKRK----HKKEWGRKKEHDWKK--DEAEKGKEWKHGKDKRKEHLMKYKEE 588
Cdd:PTZ00121 1452 KaeeakkaeeAKKKAEEAKKADEAKKKaeeaKKADEAKKKAEEAKKkaDEAKKAAEAKKKADEAKKAEEAKKAD 1525
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
354-551 |
5.55e-06 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 49.44 E-value: 5.55e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528509307 354 VGALVLLCVGSFFFSDDFDGTELSDQELLDKLAQENKQINILEAQIESQKEELDQALKmasqvhstEKGALENENTKLKE 433
Cdd:COG3883 1 ALALALAAPTPAFADPQIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQA--------ELEALQAEIDKLQA 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528509307 434 QLSElpgLKEELQMLRARVAELTK---------------LTAEDLT---------QTIPDSDpPSTADSVPEEAEKHRDK 489
Cdd:COG3883 73 EIAE---AEAEIEERREELGERARalyrsggsvsyldvlLGSESFSdfldrlsalSKIADAD-ADLLEELKADKAELEAK 148
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 528509307 490 KEELKRQKALLEESRKRLEGMKKpswNKQGLRESLVEMQKRLSKQVEQLGKREDWKRKHKKE 551
Cdd:COG3883 149 KAELEAKLAELEALKAELEAAKA---ELEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAA 207
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
379-587 |
2.32e-05 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 48.14 E-value: 2.32e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528509307 379 QELLDKLAQENKQINILEAQIESQKEELDQA-----------------LKMASQVHSTEKGALENENTKLKEQLSELPGL 441
Cdd:TIGR02169 677 QRLRERLEGLKRELSSLQSELRRIENRLDELsqelsdasrkigeiekeIEQLEQEEEKLKERLEELEEDLSSLEQEIENV 756
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528509307 442 KEELQMLRARVAELT------KLTAEDLTQTIPDSdppstadSVPEEAEKHRDKKEELKRQKALLEESRKRLEGMKKPSW 515
Cdd:TIGR02169 757 KSELKELEARIEELEedlhklEEALNDLEARLSHS-------RIPEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKE 829
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 528509307 516 NKQGLRESLVEMQKRLSKQVEQLGKREDWKRKHKKEWGRK-KEHdwKKDEAEKGKEWKHGKDKRKEHLMKYKE 587
Cdd:TIGR02169 830 YLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEElEEL--EAALRDLESRLGDLKKERDELEAQLRE 900
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
379-508 |
6.70e-05 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 46.30 E-value: 6.70e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528509307 379 QELLDKLAQENKQINILEAQIESQKEELDQaLKMASQVHstekgALENENTKLKEQLSELPG----LKEELQMLRARVAE 454
Cdd:COG4717 91 AELQEELEELEEELEELEAELEELREELEK-LEKLLQLL-----PLYQELEALEAELAELPErleeLEERLEELRELEEE 164
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*....
gi 528509307 455 LTKLTAE-----DLTQTIPDSDPPSTADSVPEEAEKHRDKKEELKRQKALLEESRKRLE 508
Cdd:COG4717 165 LEELEAElaelqEELEELLEQLSLATEEELQDLAEELEELQQRLAELEEELEEAQEELE 223
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
375-508 |
9.46e-05 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 46.20 E-value: 9.46e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528509307 375 ELSDQELLDKLAQENKQINILEAQIESQKEELDQalkMASQVHSTEK--GALENENTKLKEQLSE----LPGLKEELQML 448
Cdd:TIGR02168 865 EELIEELESELEALLNERASLEEALALLRSELEE---LSEELRELESkrSELRRELEELREKLAQlelrLEGLEVRIDNL 941
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 528509307 449 RARVAELTKLTAEDLTQTIP--DSDPPSTADSV-----------------PEEAEKHRDKKEELKRQKALLEESRKRLE 508
Cdd:TIGR02168 942 QERLSEEYSLTLEEAEALENkiEDDEEEARRRLkrlenkikelgpvnlaaIEEYEELKERYDFLTAQKEDLTEAKETLE 1020
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
383-567 |
1.21e-04 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 45.42 E-value: 1.21e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528509307 383 DKLAQENKQINILEAQIESQKEELDQAlkmasqvhSTEKGALENENTKLKEQLSELPG----LKEELQMLRARVAELTKL 458
Cdd:PRK02224 377 EAVEDRREEIEELEEEIEELRERFGDA--------PVDLGNAEDFLEELREERDELREreaeLEATLRTARERVEEAEAL 448
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528509307 459 TAE----DLTQTIPDSDPPSTADSVPEEAEKHRDKKEELKRQKALLEESRKRLEGMKKPSWNKQGLRESLVEMQKRLSKQ 534
Cdd:PRK02224 449 LEAgkcpECGQPVEGSPHVETIEEDRERVEELEAELEDLEEEVEEVEERLERAEDLVEAEDRIERLEERREDLEELIAER 528
|
170 180 190
....*....|....*....|....*....|...
gi 528509307 535 VEQLGKREDwKRKHKKEwgRKKEHDWKKDEAEK 567
Cdd:PRK02224 529 RETIEEKRE-RAEELRE--RAAELEAEAEEKRE 558
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
379-570 |
1.67e-04 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 45.01 E-value: 1.67e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528509307 379 QELLDKLAQENKQINILEAQIESQKE---ELDQALKMASQvhstEKGALENENTKLKEQL----SELPGLKEELQMLRAR 451
Cdd:TIGR04523 380 QSYKQEIKNLESQINDLESKIQNQEKlnqQKDEQIKKLQQ----EKELLEKEIERLKETIiknnSEIKDLTNQDSVKELI 455
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528509307 452 VAELTKLTAEDLTQTIPDSDPPSTADSVPEEAEKHRDKKE----ELKRQKALLEESRKRLEGMKKPSWNKQglrESLVEM 527
Cdd:TIGR04523 456 IKNLDNTRESLETQLKVLSRSINKIKQNLEQKQKELKSKEkelkKLNEEKKELEEKVKDLTKKISSLKEKI---EKLESE 532
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 528509307 528 QKRLSKQVEQLGKREDWKRKHKKEWGRKKEHDWKKDEAEKGKE 570
Cdd:TIGR04523 533 KKEKESKISDLEDELNKDDFELKKENLEKEIDEKNKEIEELKQ 575
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
379-543 |
4.22e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 43.75 E-value: 4.22e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528509307 379 QELLDKLAQENKQINILEAQIESQKEELDQALKMASQVHSTEKGALENENTKLKEQLSElpgLKEELQMLRARVAEL--- 455
Cdd:COG4913 298 EELRAELARLEAELERLEARLDALREELDELEAQIRGNGGDRLEQLEREIERLERELEE---RERRRARLEALLAALglp 374
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528509307 456 TKLTAEDLTQTIpdSDPPSTADSVPEEAE-------KHRDKKEELKRQKALLEESRKRLEGMKKPswnkqgLRESLVEMQ 528
Cdd:COG4913 375 LPASAEEFAALR--AEAAALLEALEEELEaleealaEAEAALRDLRRELRELEAEIASLERRKSN------IPARLLALR 446
|
170
....*....|....*
gi 528509307 529 KRLSkqvEQLGKRED 543
Cdd:COG4913 447 DALA---EALGLDEA 458
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
382-549 |
8.65e-04 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 42.97 E-value: 8.65e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528509307 382 LDKLAQENKQINILEAQIESQKEEL-------DQALKMASQVHSTEKGALENENTKLKEQLSELPGLkeELQMLRARVAE 454
Cdd:PRK01156 514 INKSINEYNKIESARADLEDIKIKInelkdkhDKYEEIKNRYKSLKLEDLDSKRTSWLNALAVISLI--DIETNRSRSNE 591
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528509307 455 LTKLT--AEDLTQTI----PD--SDPPSTADSVPEEAEKHRDKKEELKRQKALLEESRKRLEGMKKPSWNKQGLRESLVE 526
Cdd:PRK01156 592 IKKQLndLESRLQEIeigfPDdkSYIDKSIREIENEANNLNNKYNEIQENKILIEKLRGKIDNYKKQIAEIDSIIPDLKE 671
|
170 180 190
....*....|....*....|....*....|....
gi 528509307 527 MQKRLS------KQVEQ-----LGKREDWKRKHK 549
Cdd:PRK01156 672 ITSRINdiednlKKSRKalddaKANRARLESTIE 705
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
375-551 |
1.30e-03 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 42.23 E-value: 1.30e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528509307 375 ELSDQELLDKLAQENKQINILEAQIESQKEELDQALKMASQVHSTEKGALENENTKLKEQLSElpgLKEELQMLRARVAE 454
Cdd:COG1196 322 EEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEEL---AEELLEALRAAAEL 398
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528509307 455 LTKLTAEDLTQtipdsdppstaDSVPEEAEKHRDKKEELKRQKALLEESRKRLEgmkkpswnkQGLRESLVEMQKRLSKQ 534
Cdd:COG1196 399 AAQLEELEEAE-----------EALLERLERLEEELEELEEALAELEEEEEEEE---------EALEEAAEEEAELEEEE 458
|
170
....*....|....*..
gi 528509307 535 VEQLGKREDWKRKHKKE 551
Cdd:COG1196 459 EALLELLAELLEEAALL 475
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
380-588 |
1.39e-03 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 41.97 E-value: 1.39e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528509307 380 ELLDKLAQENKQINILEAQIESQKEELDQALKMASQVHSTeKGALENENTKLKEQLSELPGLKEELQMLRARVAELtKLT 459
Cdd:PRK03918 197 EKEKELEEVLREINEISSELPELREELEKLEKEVKELEEL-KEEIEELEKELESLEGSKRKLEEKIRELEERIEEL-KKE 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528509307 460 AEDLTQTIpdsdppstadsvpEEAEKHRDKKEELKRQKALLEESRKRLEGMKKPSWNKQGLRESLVEMQKRLSKQVEQLG 539
Cdd:PRK03918 275 IEELEEKV-------------KELKELKEKAEEYIKLSEFYEEYLDELREIEKRLSRLEEEINGIEERIKELEEKEERLE 341
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 528509307 540 KREDWKRKHKKEWGRKKEHDW-------KKDEAEKGKEWKHGKDKRK-----EHLMKYKEE 588
Cdd:PRK03918 342 ELKKKLKELEKRLEELEERHElyeeakaKKEELERLKKRLTGLTPEKlekelEELEKAKEE 402
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
379-538 |
1.47e-03 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 41.97 E-value: 1.47e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528509307 379 QELLDKLAQENKQINILEAQIE---SQKEELDQALKM-------ASQVHSTEKGALENENTKLKEQLSELPGLKEELQML 448
Cdd:TIGR02168 305 QILRERLANLERQLEELEAQLEeleSKLDELAEELAEleekleeLKEELESLEAELEELEAELEELESRLEELEEQLETL 384
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528509307 449 RARVAELtKLTAEDLTQTIpdsdppSTADSVPEEAEKHRDK------KEELKRQKALLEESRKRLEGMKKPSWNKQGLRE 522
Cdd:TIGR02168 385 RSKVAQL-ELQIASLNNEI------ERLEARLERLEDRRERlqqeieELLKKLEEAELKELQAELEELEEELEELQEELE 457
|
170
....*....|....*.
gi 528509307 523 SLVEMQKRLSKQVEQL 538
Cdd:TIGR02168 458 RLEEALEELREELEEA 473
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
20-262 |
1.90e-03 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 41.70 E-value: 1.90e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528509307 20 SPEEVAADPTAPVDDGTESIGDAPSLSEDIAGSSLEVRSHDPETPILEPVLSEEGQQVSAPPPICQETSPDFLEEMAASG 99
Cdd:PHA03307 125 SPPPSPAPDLSEMLRPVGSPGPPPAASPPAAGASPAAVASDAASSRQAALPLSSPEETARAPSSPPAEPPPSTPPAAASP 204
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528509307 100 PPEVELDPDIHApiiHDTITSSPPDSDLLGAVpfsiATESAFQFSEESVLDEPTEEDVTDIFPSQ----------HVPIQ 169
Cdd:PHA03307 205 RPPRRSSPISAS---ASSPAPAPGRSAADDAG----ASSSDSSSSESSGCGWGPENECPLPRPAPitlptriweaSGWNG 277
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528509307 170 ESPAPQPEPKITSTPEPFREVSSALDVSEVSAEISHAHTIRGDSALPVLDIHADVHPAPETPPLASPSEDDtgfgttlES 249
Cdd:PHA03307 278 PSSRPGPASSSSSPRERSPSPSPSSPGSGPAPSSPRASSSSSSSRESSSSSTSSSSESSRGAAVSPGPSPS-------RS 350
|
250
....*....|...
gi 528509307 250 PAPDSPYPETIGS 262
Cdd:PHA03307 351 PSPSRPPPPADPS 363
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
442-588 |
2.11e-03 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 41.67 E-value: 2.11e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528509307 442 KEELQMLRARVAELTKLTAEDLTQTIPDSDPPSTADSVPEEAEKHrdKKEELKR--QKALLEESRKRLEGMKKPSWNKQG 519
Cdd:PTZ00121 1246 EEERNNEEIRKFEEARMAHFARRQAAIKAEEARKADELKKAEEKK--KADEAKKaeEKKKADEAKKKAEEAKKADEAKKK 1323
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 528509307 520 LRESlvemqkrlSKQVEQLGKREDWKRkhKKEWGRKKEHDWKKDEAEKGKEWKHGKDKRKEHLMKYKEE 588
Cdd:PTZ00121 1324 AEEA--------KKKADAAKKKAEEAK--KAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADA 1382
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
373-599 |
2.54e-03 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 41.18 E-value: 2.54e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528509307 373 GTELSDQELLDKLAQENKQINILEA---QIESQKEELDQALKMASQVHSTEKGA------LENENTKLKEQLSELPGLKE 443
Cdd:PRK02224 458 GQPVEGSPHVETIEEDRERVEELEAeleDLEEEVEEVEERLERAEDLVEAEDRIerleerREDLEELIAERRETIEEKRE 537
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528509307 444 ELQMLRARVAELTKLTAEDltqtipdsdpPSTADSVPEEAEKHRDKKEELKRQKALLEESRKRLEGMKkpswNKQGLRES 523
Cdd:PRK02224 538 RAEELRERAAELEAEAEEK----------REAAAEAEEEAEEAREEVAELNSKLAELKERIESLERIR----TLLAAIAD 603
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 528509307 524 LVEMQKRLSKQVEQLGKREDWKRKHKKEWG-RKKEHDWKKDEA--EKGKEwkhgkdkRKEHLMKYKEEWDLNKDERRQE 599
Cdd:PRK02224 604 AEDEIERLREKREALAELNDERRERLAEKReRKRELEAEFDEAriEEARE-------DKERAEEYLEQVEEKLDELREE 675
|
|
| HEC1 |
COG5185 |
Chromosome segregation protein NDC80, interacts with SMC proteins [Cell cycle control, cell ... |
385-570 |
2.57e-03 |
|
Chromosome segregation protein NDC80, interacts with SMC proteins [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 444066 [Multi-domain] Cd Length: 594 Bit Score: 41.10 E-value: 2.57e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528509307 385 LAQENKQINILEAQIESQKEELDQALKMASQVhstEKGALENENTKLKEQLSELPGLKEELQMLRARVAELTKLTAEdLT 464
Cdd:COG5185 372 LSKSSEELDSFKDTIESTKESLDEIPQNQRGY---AQEILATLEDTLKAADRQIEELQRQIEQATSSNEEVSKLLNE-LI 447
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528509307 465 QTIPDSDPPSTADSVPEEAEKHRDKKEELKRQKALLEESRKRLEGmkkpswNKQGLRESLVEMQKRLSKQVEQLGKREDW 544
Cdd:COG5185 448 SELNKVMREADEESQSRLEEAYDEINRSVRSKKEDLNEELTQIES------RVSTLKATLEKLRAKLERQLEGVRSKLDQ 521
|
170 180
....*....|....*....|....*.
gi 528509307 545 KRKHKKEWGRKKEHDWKKDEAEKGKE 570
Cdd:COG5185 522 VAESLKDFMRARGYAHILALENLIPA 547
|
|
| PRK15422 |
PRK15422 |
septal ring assembly protein ZapB; Provisional |
379-455 |
2.81e-03 |
|
septal ring assembly protein ZapB; Provisional
Pssm-ID: 185320 [Multi-domain] Cd Length: 79 Bit Score: 37.37 E-value: 2.81e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 528509307 379 QELLDKLAQENKQINILEAQIESQKEELDQalkMASQVHSTEKG--ALENENTKLKEQLSelpGLKEELQMLRARVAEL 455
Cdd:PRK15422 7 EKLEAKVQQAIDTITLLQMEIEELKEKNNS---LSQEVQNAQHQreELERENNHLKEQQN---GWQERLQALLGRMEEV 79
|
|
| PilN |
COG3166 |
Type IV pilus assembly protein PilN [Cell motility, Extracellular structures]; |
337-469 |
3.25e-03 |
|
Type IV pilus assembly protein PilN [Cell motility, Extracellular structures];
Pssm-ID: 442399 [Multi-domain] Cd Length: 185 Bit Score: 39.18 E-value: 3.25e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528509307 337 LPVRKEEKRGFSLNQL-IVGALVLLCVGSFFFSDDFDGTELSDQEllDKLAQENKQINILEAQIESQKEeldqalkmasq 415
Cdd:COG3166 7 LPWREERRKRRKRRFLaLLVLALLLALAVLFLVYLYLQGQIAQQQ--ARNAALQQEIAKLDKQIAEIKE----------- 73
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....
gi 528509307 416 vhstekgaLENENTKLKEQLSELpglkEELQMLRARVAELtkLtaEDLTQTIPD 469
Cdd:COG3166 74 --------LKKQKAELLARLQVI----EQLQQSRPPWVHL--L--DELARLLPE 111
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
372-558 |
3.25e-03 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 41.20 E-value: 3.25e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528509307 372 DGTELSDQELLDKLAQENKQINILEAQIEsqkeELDQALKMASQVHSTEKGALENENTKLKEQLSELPGLKEELQMLRAR 451
Cdd:TIGR02168 666 AKTNSSILERRREIEELEEKIEELEEKIA----ELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAE 741
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528509307 452 VAELTKLtAEDLTQTIPDSDPPSTadSVPEEAEKHRDKKEELKRQKALLEESRKRLEGmkkpswNKQGLRESLVEMQKRL 531
Cdd:TIGR02168 742 VEQLEER-IAQLSKELTELEAEIE--ELEERLEEAEEELAEAEAEIEELEAQIEQLKE------ELKALREALDELRAEL 812
|
170 180
....*....|....*....|....*..
gi 528509307 532 SKQVEQLGKREDWKRKHKKEWGRKKEH 558
Cdd:TIGR02168 813 TLLNEEAANLRERLESLERRIAATERR 839
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
375-551 |
3.79e-03 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 40.69 E-value: 3.79e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528509307 375 ELSDQELLDKLAQENKQINILEAQIES----------QKEELDQALKMASQVHSTEKGALENENTKLKEQLSELPGLKEE 444
Cdd:COG1196 273 RLELEELELELEEAQAEEYELLAELARleqdiarleeRRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEE 352
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528509307 445 LQMLRARVAELTKLTAEDLTQTIPDSdppstadsvpEEAEKHRDKKEELKRQKALLEESRKRLEGMKKpswNKQGLRESL 524
Cdd:COG1196 353 LEEAEAELAEAEEALLEAEAELAEAE----------EELEELAEELLEALRAAAELAAQLEELEEAEE---ALLERLERL 419
|
170 180
....*....|....*....|....*..
gi 528509307 525 VEMQKRLSKQVEQLGKREDWKRKHKKE 551
Cdd:COG1196 420 EEELEELEEALAELEEEEEEEEEALEE 446
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
378-538 |
4.46e-03 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 40.39 E-value: 4.46e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528509307 378 DQELLDKLAQENKQINILEAQIESQKEELDQA------LKMASQVHST--EKGALENENTKLKEQLSElpgLKEELQMLR 449
Cdd:COG3206 163 EQNLELRREEARKALEFLEEQLPELRKELEEAeaaleeFRQKNGLVDLseEAKLLLQQLSELESQLAE---ARAELAEAE 239
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528509307 450 ARVAELTKLTAEDLTQTIPDSDPPSTADSVPEEA--------------EKH------RDKKEELKRQkaLLEESRKRLEG 509
Cdd:COG3206 240 ARLAALRAQLGSGPDALPELLQSPVIQQLRAQLAeleaelaelsarytPNHpdvialRAQIAALRAQ--LQQEAQRILAS 317
|
170 180
....*....|....*....|....*....
gi 528509307 510 MKKpswNKQGLRESLVEMQKRLSKQVEQL 538
Cdd:COG3206 318 LEA---ELEALQAREASLQAQLAQLEARL 343
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
379-551 |
5.93e-03 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 39.50 E-value: 5.93e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528509307 379 QELLDKLAQENKQINILEAQIESQKEELDQALKMASQVHStekgALENENTKLKEQLSELPGLKEELQMLRARVAELTKl 458
Cdd:COG4372 48 EQLREELEQAREELEQLEEELEQARSELEQLEEELEELNE----QLQAAQAELAQAQEELESLQEEAEELQEELEELQK- 122
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528509307 459 TAEDLTQTIPDSDppSTADSVPEEAEKHRDKKEELKRQKALLEESRKRLEgMKKPSWNKQGLRESLVEMQKRLSKQVEQL 538
Cdd:COG4372 123 ERQDLEQQRKQLE--AQIAELQSEIAEREEELKELEEQLESLQEELAALE-QELQALSEAEAEQALDELLKEANRNAEKE 199
|
170
....*....|...
gi 528509307 539 GKREDWKRKHKKE 551
Cdd:COG4372 200 EELAEAEKLIESL 212
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
380-570 |
6.23e-03 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 40.12 E-value: 6.23e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528509307 380 ELLDKLAQENKQINILEAQIESQKEELDQALKM--ASQVHSTEKGALENENTKLKEQL--SELPGLKEELQMLRA----- 450
Cdd:PTZ00121 1623 EELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAeeENKIKAAEEAKKAEEDKKKAEEAkkAEEDEKKAAEALKKEaeeak 1702
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528509307 451 RVAELTKLTAEDLTQtipdsdppstADSVPEEAEKHRDKKEELKRQ----KALLEESRKRLEGMKKPSWNKQGLRESLVE 526
Cdd:PTZ00121 1703 KAEELKKKEAEEKKK----------AEELKKAEEENKIKAEEAKKEaeedKKKAEEAKKDEEEKKKIAHLKKEEEKKAEE 1772
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 528509307 527 MQKRLSKQVEQLGKREDWKRKHKKEWGRKKEHDWKKDEAEKGKE 570
Cdd:PTZ00121 1773 IRKEKEAVIEEELDEEDEKRRMEVDKKIKDIFDNFANIIEGGKE 1816
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
390-522 |
7.45e-03 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 39.66 E-value: 7.45e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528509307 390 KQINILEAQIESQKEELDQALKMASQVhstekgalENENTKLKEQLSELPGL--KEELQMLRARVAELTKLTAEDLTQTi 467
Cdd:PRK03918 612 KELEREEKELKKLEEELDKAFEELAET--------EKRLEELRKELEELEKKysEEEYEELREEYLELSRELAGLRAEL- 682
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*....
gi 528509307 468 pdsdppstadsvpEEAEKHRDKK----EELKRQKALLEESRKRLEGMKKPSWNKQGLRE 522
Cdd:PRK03918 683 -------------EELEKRREEIkktlEKLKEELEEREKAKKELEKLEKALERVEELRE 728
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
344-466 |
7.72e-03 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 39.89 E-value: 7.72e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528509307 344 KRGFSLNQLIVGALVLLCVGSFFFSDDFDG---TELSDQELLDKLAqENKQiniLEAQIESQKEELDQALKMASQVHSTE 420
Cdd:PRK11281 4 SRHFVFRAFIAFLFLLLCLSSAFARAASNGdlpTEADVQAQLDALN-KQKL---LEAEDKLVQQDLEQTLALLDKIDRQK 79
|
90 100 110 120
....*....|....*....|....*....|....*....|....*.
gi 528509307 421 KgalenENTKLKEQLSELPglkEELQMLRARVAELTKLTAEDLTQT 466
Cdd:PRK11281 80 E-----ETEQLKQQLAQAP---AKLRQAQAELEALKDDNDEETRET 117
|
|
| COG5638 |
COG5638 |
Uncharacterized conserved protein [Function unknown]; |
367-579 |
7.87e-03 |
|
Uncharacterized conserved protein [Function unknown];
Pssm-ID: 227925 [Multi-domain] Cd Length: 622 Bit Score: 39.77 E-value: 7.87e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528509307 367 FSDDFDGTELSDQELLDKLAQENKQINILEAQiESQKEELDQALKMASQVHSTEKGALENE-NTKLKEQLSELPGLKEEL 445
Cdd:COG5638 414 FTSHLPASNESESDDKLETTIEKLDRKLRERQ-ENRKERQLKKTKDDSDVDLKDKKESINKkNKKGKHAIERTAASKEEL 492
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528509307 446 QMLRArvaeltkltAEDLTQTIPDSDPPSTADSVPEEAEKHRDKKEEL-----------KRQKALLEESRKRLEGMKKPS 514
Cdd:COG5638 493 ELIKA---------DDEDDEQLDHFDMKSILKAEKFKKNRKLKKKASNleegfvfdpkdPRFVAIFEDHNFAIDPTHPEF 563
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 528509307 515 WNKQGLRESLVEMQKRLSKQVEQLGkredwkrkhkkewGRKKEHDWKKDEAEKGKEWKHGKDKRK 579
Cdd:COG5638 564 KKTGGMKKIMDEKRKRLKNNIEQTQ-------------DGKPELKIKKRKAEKGDQRQELDRIVK 615
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
374-543 |
9.74e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 38.37 E-value: 9.74e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528509307 374 TELSDQELLDKLAQENKQInileAQIESQKEELDQALKMASQVHSTEKGALENENTKLKEQLSELPGLKEELQMLRARVA 453
Cdd:COG1579 1 AMPEDLRALLDLQELDSEL----DRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIK 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528509307 454 ELT-KLTA-------EDLTQTIpdsdppstadsvpEEAEKHRDKKE-ELKRQKALLEESRKRLEGMKKpswNKQGLRESL 524
Cdd:COG1579 77 KYEeQLGNvrnnkeyEALQKEI-------------ESLKRRISDLEdEILELMERIEELEEELAELEA---ELAELEAEL 140
|
170
....*....|....*....
gi 528509307 525 VEMQKRLSKQVEQLGKRED 543
Cdd:COG1579 141 EEKKAELDEELAELEAELE 159
|
|
| |
