|
Name |
Accession |
Description |
Interval |
E-value |
| CCDC144C |
pfam14915 |
CCDC144C protein coiled-coil region; This family includes the human protein CCDC144C and the ... |
501-804 |
4.89e-146 |
|
CCDC144C protein coiled-coil region; This family includes the human protein CCDC144C and the ankyrin repeat domain-containing protein 26-like 1 found in eukaryotes. Its function remains unknown, however, it is known to contain a coiled-coil domain which corresponds to this region. The ankyrin repeat which features in this protein is a common amino acid motif.
Pssm-ID: 464371 [Multi-domain] Cd Length: 304 Bit Score: 444.04 E-value: 4.89e-146
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 501 NQRLQDEVAVLRLEMDTIKSHNQEKEKRYLEDIKIANEKNDNLQRMVKLNEETFTKTIFQYTGQLNSLKAENTMLSSKLD 580
Cdd:pfam14915 1 NCMLQDEIAMLRLEIDTIKNQNQEKEKKYLEDIEILKEKNDDLQKTLKLNEETLTKTVFQYNGQLNVLKAENTMLNSKLE 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 581 NEKQNKERLETDVESFRSRLASALHDHAEIQTAKRDLEIAFQRARDEWFRVKDKMNFDMSNLRDNNEVLSQQLSKTERKL 660
Cdd:pfam14915 81 NEKQNKERLETEVESYRSRLAAAIQDHEQSQTSKRDLELAFQRERDEWLRLQDKMNFDVSNLRDENEILSQQLSKAESKA 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 661 NSLEIEFHHTKDELREKTLALKHAQRDLSQTQCQMKEVEHMFQDEQGKVSKFMGKQESIEERLAQLQSENTLLRQQLDDA 740
Cdd:pfam14915 161 NSLENELHRTRDALREKTLLLESVQRDLSQAQCQKKELEHMYQNEQDKVNKYIGKQESLEERLAQLQSENMLLRQQLEDA 240
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1907172253 741 ANKAESKDKTIVNIQDQFQDVLTRFQAESQRHSLRLEDRNQELVSECSHLRERLCQYENEKAER 804
Cdd:pfam14915 241 QNKADAKEKTVIDIQDQFQDIVKKLQAESEKQVLLLEERNKELINECNHLKERLYQYEKEKAER 304
|
|
| DUF3496 |
pfam12001 |
Domain of unknown function (DUF3496); This presumed domain is functionally uncharacterized. ... |
1110-1217 |
3.09e-49 |
|
Domain of unknown function (DUF3496); This presumed domain is functionally uncharacterized. This domain is found in eukaryotes. This domain is about 110 amino acids in length.
Pssm-ID: 463425 [Multi-domain] Cd Length: 109 Bit Score: 169.85 E-value: 3.09e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 1110 RSQMELRIKDLESQLYRMKA-QEDFDKIELEKYKQLYQEEFRARKSLSSKLNKTSEKLEEASSKLLLEEQQNRSLLSTLS 1188
Cdd:pfam12001 1 RSQMELRIKDLESELSKMKTsQEDSNKIELEKYKQLYLEELKVRKSLSNKLNKTNERLAEVSTKLLVEKQQNRSLLSTLT 80
|
90 100
....*....|....*....|....*....
gi 1907172253 1189 TRPVVECPCVGSFHNSLVFNRTLIPRENI 1217
Cdd:pfam12001 81 TRPVLESPCVGNLNNSLVLNRNFIPRENL 109
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
327-1174 |
7.94e-21 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 99.75 E-value: 7.94e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 327 ELKRSHCELLTGKLKRMENKYKGLQKEMSETEEVKSRLEHEKVGWEQELCRLRFALKQEEEKRRSADQLSEKTSEQLRRK 406
Cdd:TIGR02168 221 ELRELELALLVLRLEELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRL 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 407 GEQCQSEVEARQQLEASLRTLEMELKTVKSHLNQVLEERNETQRQLSREQNarmlqdgilashLCKQKEIEMTQKKMTSE 486
Cdd:TIGR02168 301 EQQKQILRERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKE------------ELESLEAELEELEAELE 368
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 487 VSVSHEKEKDLLHknQRLQDEVAVLRLEMDTIKSHNQEKEKRyledIKIANEKNDNLQRMVKLNEETFTKTIFQYT-GQL 565
Cdd:TIGR02168 369 ELESRLEELEEQL--ETLRSKVAQLELQIASLNNEIERLEAR----LERLEDRRERLQQEIEELLKKLEEAELKELqAEL 442
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 566 NSLKAENTMLSSKLDNEKQNKERLETDVESFRSRLASALHDHAEIQTAKRDLEIAFQRARDEWFRVKDKMNfDMSNLRDN 645
Cdd:TIGR02168 443 EELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQENLEGFSEGVKALLK-NQSGLSGI 521
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 646 NEVLSQQLSKTERKLNSLEIefhhtkdELREKTLALkhAQRDLSQtqcQMKEVEHMFQDEQGKVSKFMGKQesieERLAQ 725
Cdd:TIGR02168 522 LGVLSELISVDEGYEAAIEA-------ALGGRLQAV--VVENLNA---AKKAIAFLKQNELGRVTFLPLDS----IKGTE 585
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 726 LQSENTLLRQQLDDAANKAESKDKTIVNIQDQFQDVLTRF-------QAESQRHSLRLEDRnqeLVSECSHLRERLCQYE 798
Cdd:TIGR02168 586 IQGNDREILKNIEGFLGVAKDLVKFDPKLRKALSYLLGGVlvvddldNALELAKKLRPGYR---IVTLDGDLVRPGGVIT 662
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 799 NEKAEREVVVRQLQQELADTLKKQSMSEASLEVSSRYRSNLEEEARDLKKKLGQLRSQLQEARDQHREAVHHAEKMEDHL 878
Cdd:TIGR02168 663 GGSAKTNSSILERRREIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEV 742
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 879 QKLELEKSKFEITIKKQSEEIDQLQENLsrvnlsEEDKEKLQKLTELKESLECTVDQEQKRSSALEKELAEFKEVLKMTK 958
Cdd:TIGR02168 743 EQLEERIAQLSKELTELEAEIEELEERL------EEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLN 816
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 959 KELNEYENRELNLRQDIknnhlemdipvSTLIKKIDDLTAKLETASskcLHLGKKNQLLQQELLLMRTIQKKCGKLEKNK 1038
Cdd:TIGR02168 817 EEAANLRERLESLERRI-----------AATERRLEDLEEQIEELS---EDIESLAAEIEELEELIEELESELEALLNER 882
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 1039 KQLEQEVVNLRSHMEKNMVEHSQAQQYAREvEERARQDLVEKLKQVNLFLQ-AQAASQESLEQLRENSNASVRSQMELRI 1117
Cdd:TIGR02168 883 ASLEEALALLRSELEELSEELRELESKRSE-LRRELEELREKLAQLELRLEgLEVRIDNLQERLSEEYSLTLEEAEALEN 961
|
810 820 830 840 850 860
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1907172253 1118 KDLESQlyrMKAQEDFDKIElEKYKQL------YQEEFRARKSLSSKLNKTSEKLEEASSKLL 1174
Cdd:TIGR02168 962 KIEDDE---EEARRRLKRLE-NKIKELgpvnlaAIEEYEELKERYDFLTAQKEDLTEAKETLE 1020
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
671-1181 |
1.27e-14 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 79.21 E-value: 1.27e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 671 KDELREKTLALKHAQRDLSQTQCQMKEVEHmfQDEQGKVSKFMGKQESIEERLAQLQSENTLLRQQLDDAANKAESKDKT 750
Cdd:COG1196 219 KEELKELEAELLLLKLRELEAELEELEAEL--EELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAE 296
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 751 IVNIQDQFQDVLTRFQAESQRhSLRLEDRNQELVSECSHLRERLCQYENEKAEREVVVRQLQQELADTLKKQSMSEASLE 830
Cdd:COG1196 297 LARLEQDIARLEERRRELEER-LEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELA 375
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 831 VSSRYRSNLEEEARDLKKKLGQLRSQLQEARDQHREAVHHAEKMEDHLQKLELEKSKFEITIKKQSEEIDQLQENLSRvn 910
Cdd:COG1196 376 EAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAE-- 453
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 911 LSEEDKEKLQKLTELKESLEctvdQEQKRSSALEKELAEFKEVLKMTKKELNEYENRELN-LRQDIKNNHLEMDIPVSTL 989
Cdd:COG1196 454 LEEEEEALLELLAELLEEAA----LLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGvKAALLLAGLRGLAGAVAVL 529
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 990 IKKIDDLTAKLETASS---------------KCLHLGKKNQLLQQELLLMRTIQkkcgKLEKNKKQLEQEVVNLRSHMEK 1054
Cdd:COG1196 530 IGVEAAYEAALEAALAaalqnivveddevaaAAIEYLKAAKAGRATFLPLDKIR----ARAALAAALARGAIGAAVDLVA 605
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 1055 NMVEHSQAQQYAREVEERARQDLVEKLKQVNLFLQAQAASQESLEQLRENSNASVRSQMELRIKDLESQLYRMKAQEDFD 1134
Cdd:COG1196 606 SDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELA 685
|
490 500 510 520
....*....|....*....|....*....|....*....|....*..
gi 1907172253 1135 KIELEKYKQLYQEEFRARKSLSSKLNKTSEKLEEASSKLLLEEQQNR 1181
Cdd:COG1196 686 ERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEA 732
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
310-1001 |
2.15e-14 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 78.56 E-value: 2.15e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 310 ASLLKIRDAVYSYKRLIELKRSHCELLTGKLKRMENKYKGLQKEMSETEEVKSRLEHEKVGWEQELCRLRFALKQEEEKR 389
Cdd:TIGR02168 267 EKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEELAELEEKL 346
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 390 RSADQLSEKTSEQLRRKGEQCQSEVEARQQLEASLRTLEMELKTVKSHLNQVLEERNETQRQLSREQNARMLQDGILASH 469
Cdd:TIGR02168 347 EELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEEL 426
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 470 LCKQKEIEM--TQKKMTSEVSVSHEKEKDLLHKNQRL---QDEVAVLRLEMDTIKSHNQEKEKRY--LEDIKIANEKNDN 542
Cdd:TIGR02168 427 LKKLEEAELkeLQAELEELEEELEELQEELERLEEALeelREELEEAEQALDAAERELAQLQARLdsLERLQENLEGFSE 506
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 543 LQRMVKLNEETFTktifQYTGQLNSL--------KAENTMLSSKL-----DNEKQNKERLETDVESFRSR---LASALHD 606
Cdd:TIGR02168 507 GVKALLKNQSGLS----GILGVLSELisvdegyeAAIEAALGGRLqavvvENLNAAKKAIAFLKQNELGRvtfLPLDSIK 582
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 607 HAEIQTAKRDL---EIAFQRARDEWFRVKDKMNFDMSNLRDNNEVLSQQLSKTE-RKLNSLEIEFHHTKDEL--REKTLA 680
Cdd:TIGR02168 583 GTEIQGNDREIlknIEGFLGVAKDLVKFDPKLRKALSYLLGGVLVVDDLDNALElAKKLRPGYRIVTLDGDLvrPGGVIT 662
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 681 LKHAQRDLSqTQCQMKEVEHMfqdeQGKVSKFMGKQESIEERLAQLQSENTLLRQQLDDAANKAESKDKTIVNIQDQFQD 760
Cdd:TIGR02168 663 GGSAKTNSS-ILERRREIEEL----EEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLAR 737
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 761 VLTRFQAESQRHSlRLEDRNQELVSECSHLRERLCQYENEKAEREVVVRQLQQELADTLK-KQSMSEASLEVSSRYRsNL 839
Cdd:TIGR02168 738 LEAEVEQLEERIA-QLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEeLKALREALDELRAELT-LL 815
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 840 EEEARDLKKKLGQLRSQLQEARDQHREAVHHAEKMEDHLQKLELEKSKFEITIKKQSEEIDQLQenlsrvNLSEEDKEKL 919
Cdd:TIGR02168 816 NEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALL------NERASLEEAL 889
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 920 QKLTELKESLECTVDQEQKRSSALEKELAEFKEVLKMTKKELNEYENRELNLRQDIKNNH-LEMDIPVsTLIKKIDDLTA 998
Cdd:TIGR02168 890 ALLRSELEELSEELRELESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQERLSEEYsLTLEEAE-ALENKIEDDEE 968
|
...
gi 1907172253 999 KLE 1001
Cdd:TIGR02168 969 EAR 971
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
643-1006 |
2.57e-13 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 75.09 E-value: 2.57e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 643 RDNNEVLSQQLSKTERKLNSLEI------EFHHTKDELREKTLAL-----KHAQRDLSQTQCQMKEVEHMFQDEQGKVSK 711
Cdd:TIGR02168 185 RENLDRLEDILNELERQLKSLERqaekaeRYKELKAELRELELALlvlrlEELREELEELQEELKEAEEELEELTAELQE 264
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 712 FMGKQESIEERLAQLQSENTLLRQQLDDAANKAESKDKTIVNIQDQFQdvltrfqaesqrhslRLEDRNQELVSECSHLR 791
Cdd:TIGR02168 265 LEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLA---------------NLERQLEELEAQLEELE 329
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 792 ERLCQYENEKAEREVVVRQLQQELADTLKKQSMSEASLEVSSRYRSNLEEEARDLKKKLGQLRSQLQEARDQHREavhha 871
Cdd:TIGR02168 330 SKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIER----- 404
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 872 ekMEDHLQKLELEKSKFEITIKKQSEEIDQLQENLSRVNLSEEDKEklqkLTELKESLECTVDQEqkrsSALEKELAEFK 951
Cdd:TIGR02168 405 --LEARLERLEDRRERLQQEIEELLKKLEEAELKELQAELEELEEE----LEELQEELERLEEAL----EELREELEEAE 474
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 1907172253 952 EVLKMTKKELNEYENReLNLRQDIKNNHLEMDIPVSTLIKKIDDLTAKLETASSK 1006
Cdd:TIGR02168 475 QALDAAERELAQLQAR-LDSLERLQENLEGFSEGVKALLKNQSGLSGILGVLSEL 528
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
322-949 |
9.54e-12 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 69.97 E-value: 9.54e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 322 YKRL-IELKRSHCELLTGKLKRMENKYKGLQKEMSETEEVKSRLEHEKVGWEQELCRLRFALKQEEEKRRSADQLSEKTS 400
Cdd:COG1196 215 YRELkEELKELEAELLLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELL 294
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 401 EQLRRKGEQCQSEVEARQQLEASLRTLEMELKTVKSHLNQVLEERNETQRQLSREQNARMLqdgilashlcKQKEIEMTQ 480
Cdd:COG1196 295 AELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEE----------AEAELAEAE 364
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 481 KKMTSEVSVSHEKEKDLLHKNQRLQDEVAVLRLEMDTIKSHNQEKEKRYLEDIKIANEKNDNLQRMVKLNEEtftktifq 560
Cdd:COG1196 365 EALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEE-------- 436
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 561 ytgqlnsLKAENTMLSSKLDNEKQNKERLETDVESFRSRLASALHDHAEIQTAKRDLEIAFQRARDEwfrvkdkmnfdmS 640
Cdd:COG1196 437 -------EEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLL------------L 497
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 641 NLRDNNEVLSQQLSKTERKLNSLEIefHHTKDELREKTLALKHAQRDLSQTQCQMKEVEhmfQDEQGKvskfmgkqESIE 720
Cdd:COG1196 498 EAEADYEGFLEGVKAALLLAGLRGL--AGAVAVLIGVEAAYEAALEAALAAALQNIVVE---DDEVAA--------AAIE 564
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 721 ERLAQLQSENTLLrqqlddAANKAESKDKTIVNIQDQFQDVLTRFQAESQRHSLRLEDRNQELVSECSHLRERLCQYENE 800
Cdd:COG1196 565 YLKAAKAGRATFL------PLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRR 638
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 801 KAEREVVVRQLQQELADTLKKQSMSEASLEVSSRYRSNLEEEARDLKKKLGQLRSQLQEARDQHREAVHHAEKMEDHLQK 880
Cdd:COG1196 639 AVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLE 718
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1907172253 881 LELEKSKFEITIKKQSEEIDQLQEnlsrvnlsEEDKEKLQKLTELKESLEcTVDQEQKRSSALEKELAE 949
Cdd:COG1196 719 EELEEEALEEQLEAEREELLEELL--------EEEELLEEEALEELPEPP-DLEELERELERLEREIEA 778
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
708-1075 |
1.67e-11 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 68.94 E-value: 1.67e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 708 KVSKFMGKQESIEERLAQLQSENTLLRQQLDDAANKAESKDKtivniqdqFQDVLTRFQaesqrhslrlEDRNQELVSEC 787
Cdd:TIGR02169 171 KKEKALEELEEVEENIERLDLIIDEKRQQLERLRREREKAER--------YQALLKEKR----------EYEGYELLKEK 232
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 788 SHLRERLCQYENEKAEREVVVRQLQQELADTLKKQSMSEASL-EVSSRYRSNLEEEARDLKKKLGQLRSQLQEARDQHRE 866
Cdd:TIGR02169 233 EALERQKEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLeELNKKIKDLGEEEQLRVKEKIGELEAEIASLERSIAE 312
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 867 AVHHAEKMEDHLQKLELEKSKFEITIKKQSEEIDqlQENLSRVNLSEEDKEKLQKLTELKESLEctvdQEQKRSSALEKE 946
Cdd:TIGR02169 313 KERELEDAEERLAKLEAEIDKLLAEIEELEREIE--EERKRRDKLTEEYAELKEELEDLRAELE----EVDKEFAETRDE 386
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 947 LAEFKEVLKMTKKELNEYeNRELNLRQDIKNNhlemdipvstLIKKIDDLTAKLETAsskclhLGKKNQLLQQELLLMRT 1026
Cdd:TIGR02169 387 LKDYREKLEKLKREINEL-KRELDRLQEELQR----------LSEELADLNAAIAGI------EAKINELEEEKEDKALE 449
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|..
gi 1907172253 1027 IQKKCGKLEKNKKQL---EQEVVNLRSHMEKNMVEHSQAQQYAREVEERARQ 1075
Cdd:TIGR02169 450 IKKQEWKLEQLAADLskyEQELYDLKEEYDRVEKELSKLQRELAEAEAQARA 501
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
355-859 |
3.07e-11 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 68.28 E-value: 3.07e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 355 SETEEVKSRLEHEKVGWEQELCRLRFALKQEEEKRRSADQLSEKTSEQLRRKGEQCQSEVEARQQLEASLRTLEMELKTV 434
Cdd:pfam01576 57 AEAEEMRARLAARKQELEEILHELESRLEEEEERSQQLQNEKKKMQQHIQDLEEQLDEEEAARQKLQLEKVTTEAKIKKL 136
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 435 KSHLNqVLEERNEtqrQLSREQNARMLQDGILASHLCKQKE--IEMTQKKMTSEVSVSHEKEKDLLHKNQRLQDEVAVLR 512
Cdd:pfam01576 137 EEDIL-LLEDQNS---KLSKERKLLEERISEFTSNLAEEEEkaKSLSKLKNKHEAMISDLEERLKKEEKGRQELEKAKRK 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 513 LEMDTIKSHNQEKE-KRYLEDIKIAN-EKNDNLQR-MVKLNEETFTKTIFQytGQLNSLKAENTMLSSKLDNEKQNKER- 588
Cdd:pfam01576 213 LEGESTDLQEQIAElQAQIAELRAQLaKKEEELQAaLARLEEETAQKNNAL--KKIRELEAQISELQEDLESERAARNKa 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 589 ------LETDVESFRSRLASALHDHAEIQT--AKRDLEIA-FQRARDEWFRVKDKMNFDMSNLRDNN-EVLSQQLSKTER 658
Cdd:pfam01576 291 ekqrrdLGEELEALKTELEDTLDTTAAQQElrSKREQEVTeLKKALEEETRSHEAQLQEMRQKHTQAlEELTEQLEQAKR 370
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 659 KLNSLEIEFHHTKDELREKTLALKHAQRDLSQTQCQMKEVEHMFQDEQGKVSKFMGKQESIEERLAQLQSENTLLRQQLD 738
Cdd:pfam01576 371 NKANLEKAKQALESENAELQAELRTLQQAKQDSEHKRKKLEGQLQELQARLSESERQRAELAEKLSKLQSELESVSSLLN 450
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 739 DAANKAESKDKTIVNIQDQFQDVLTRFQAESqRHSLRLEDRNQELVSECSHLRERLCQYENEKAEREVVVRQLQQELADT 818
Cdd:pfam01576 451 EAEGKNIKLSKDVSSLESQLQDTQELLQEET-RQKLNLSTRLRQLEDERNSLQEQLEEEEEAKRNVERQLSTLQAQLSDM 529
|
490 500 510 520
....*....|....*....|....*....|....*....|.
gi 1907172253 819 LKKQSMSEASLEVssryrsnLEEEARDLKKKLGQLRSQLQE 859
Cdd:pfam01576 530 KKKLEEDAGTLEA-------LEEGKKRLQRELEALTQQLEE 563
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
381-952 |
9.04e-11 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 66.50 E-value: 9.04e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 381 ALKQEEEKR---------RSADQLSEKTSEQLRRKGEQCQSEVEARQQLEASLRTLEMELKTVKSHLNQVLEERNETQRQ 451
Cdd:COG1196 217 ELKEELKELeaellllklRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAE 296
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 452 LSREQNARMLQDGilashlcKQKEIEMTQKKMTSEVSVSHEKEKDLLHKNQRLQDEVAVLRLEMDTIKSHNQEKEKRYLE 531
Cdd:COG1196 297 LARLEQDIARLEE-------RRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLE 369
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 532 DIKIANEKNDNLQRmvklneetFTKTIFQYTGQLNSLKAENTMLSSKLDNEKQNKERLETDVESFRSRLASALHDHAEIQ 611
Cdd:COG1196 370 AEAELAEAEEELEE--------LAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEE 441
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 612 TAKRDLEIAFQRARDEwfrvkdkmnfdmsnlRDNNEVLSQQLSKTERKLNSLEIEFHHTKDELREKTLALKHAQRDLSQT 691
Cdd:COG1196 442 EALEEAAEEEAELEEE---------------EEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGF 506
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 692 QCQMKEVEHmfQDEQGKVSKFMGKQESIEERLAQLQsENTLLRQQLDDAANKAESKDKTIVNIQDQFQDVLTRFQAES-Q 770
Cdd:COG1196 507 LEGVKAALL--LAGLRGLAGAVAVLIGVEAAYEAAL-EAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKiR 583
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 771 RHSLRLEDRNQELVSECSHLRERLCQYENEKAER---EVVVRQLQQELADTLKKQSMS------EASLEVSSRYRSNLEE 841
Cdd:COG1196 584 ARAALAAALARGAIGAAVDLVASDLREADARYYVlgdTLLGRTLVAARLEAALRRAVTlagrlrEVTLEGEGGSAGGSLT 663
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 842 EARDLKKKLGQLRSQLQEARDQHREAVHHAEKMEDHLQKLELEKSKFEITIKKQSEEIDQLQENLSRVNLSEEDKEKLQK 921
Cdd:COG1196 664 GGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLE 743
|
570 580 590
....*....|....*....|....*....|.
gi 1907172253 922 LTELKESLECTVDQEQKRSSALEKELAEFKE 952
Cdd:COG1196 744 EEELLEEEALEELPEPPDLEELERELERLER 774
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
474-1001 |
1.26e-10 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 66.11 E-value: 1.26e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 474 KEIEMTQKKMTSEVSVSHEKEKDLLHKNQRLQDEVAVLRLEMDTI-KSHNQEKEKRYLEDIKIANEKNDNLQRMVKLNEE 552
Cdd:COG1196 235 RELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELeLELEEAQAEEYELLAELARLEQDIARLEERRREL 314
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 553 TftktifqytGQLNSLKAENTMLSSKLDNEKQNKERLETDVESFRSRLASALHDHAEIQTAKRDLEIAFQRARDEWFRVK 632
Cdd:COG1196 315 E---------ERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELA 385
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 633 DkmnfDMSNLRDNNEVLSQQLSKTERKLNSLEIEFHHTKDELREKTLALKHAQRDLSQTQCQMKEVEHMFQDEQGKVSKF 712
Cdd:COG1196 386 E----ELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEAL 461
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 713 MGKQESIEERLAQLQSENTLLRQQLDDAANKAESKDKTIVNIQDQFQDVLTRFQAESQRHSLRLEDRNQELVSEC-SHLR 791
Cdd:COG1196 462 LELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYeAALE 541
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 792 ERLCQYENEKAEREVVVRQLQQELADTLKKQSMSEASLEVSSRYRSN---------------LEEEARDLKKKLGQLRSQ 856
Cdd:COG1196 542 AALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALaaalargaigaavdlVASDLREADARYYVLGDT 621
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 857 LQEARDQHREAVHHAEKMEDHLQKLE-------------LEKSKFEITIKKQSEEIDQLQENLSRVNLSEEDKEKLQKLT 923
Cdd:COG1196 622 LLGRTLVAARLEAALRRAVTLAGRLRevtlegeggsaggSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLA 701
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1907172253 924 ELKESLECTVDQEQKRSSALEKELAEFKEVLKMTKKELNEYENRELNLRQDIKNNHLEMDIpvSTLIKKIDDLTAKLE 1001
Cdd:COG1196 702 EEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDL--EELERELERLEREIE 777
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
597-944 |
1.40e-10 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 66.24 E-value: 1.40e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 597 RSRLASALHDHAEIQTAKRDLEIAFQRardewfrvKDKMNFDMSNLRDNNEVLSQQLSKTERKLNSLEIEFHHTKDELRE 676
Cdd:TIGR02169 670 RSEPAELQRLRERLEGLKRELSSLQSE--------LRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEE 741
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 677 KTLALKHAQRDLSQTQCQMKEVEHMFQDEQGKVSKFMGKQESIEERLAQlqsentllrQQLDDAANKAESKDKTIVNIQD 756
Cdd:TIGR02169 742 LEEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEALNDLEARLSH---------SRIPEIQAELSKLEEEVSRIEA 812
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 757 QFQDVLTRFQAESQRHSLrLEDRNQELVSECSHLRERLCQYENEKAEREVVVRQLQQELADTLKKQSMSEASLEVSSRYR 836
Cdd:TIGR02169 813 RLREIEQKLNRLTLEKEY-LEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKER 891
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 837 SNLEEEARDLKKKLGQLRSQLQEARDQHREAVHHAEKMEDHLQKLE------LEKSKFEITIKKQSEEIDQLQENLSR-- 908
Cdd:TIGR02169 892 DELEAQLRELERKIEELEAQIEKKRKRLSELKAKLEALEEELSEIEdpkgedEEIPEEELSLEDVQAELQRVEEEIRAle 971
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|.
gi 1907172253 909 -VNLSEED------------KEKLQKLTELKESLECTVDQ--EQKRSSALE 944
Cdd:TIGR02169 972 pVNMLAIQeyeevlkrldelKEKRAKLEEERKAILERIEEyeKKKREVFME 1022
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
642-1122 |
1.68e-10 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 65.83 E-value: 1.68e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 642 LRDNNEVLSQQLSKTERK--------LNSLEIEFHHTKDEL------REKTLALKHAQRDL----SQTQCQMKEVEHMFQ 703
Cdd:PRK02224 182 LSDQRGSLDQLKAQIEEKeekdlherLNGLESELAELDEEIeryeeqREQARETRDEADEVleehEERREELETLEAEIE 261
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 704 DEQGKVSKFMGKQESIEERLAQLQSENTLLRQQLDDAANKAESKDKTIVNIQDQFQDVLTRF------------------ 765
Cdd:PRK02224 262 DLRETIAETEREREELAEEVRDLRERLEELEEERDDLLAEAGLDDADAEAVEARREELEDRDeelrdrleecrvaaqahn 341
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 766 -QAESQRHS-LRLEDRNQELVSECSHLRERLCQYENEKAEREVVVRQLQQELADTLKKQSMSEASLEVSSRYRSNLEEEA 843
Cdd:PRK02224 342 eEAESLREDaDDLEERAEELREEAAELESELEEAREAVEDRREEIEELEEEIEELRERFGDAPVDLGNAEDFLEELREER 421
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 844 RDLKKKLGQLRSQLQEARDQHREA---------------------VHHAEKMEDHLQKLELEKSKFEITIKKQSEEIDQL 902
Cdd:PRK02224 422 DELREREAELEATLRTARERVEEAealleagkcpecgqpvegsphVETIEEDRERVEELEAELEDLEEEVEEVEERLERA 501
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 903 QENLSRVNLSEEDKEKLQKLTELKESLECTVDQEQKRSSALEKELAEFKEVLKMTKKELNEYENR---------ELNLRQ 973
Cdd:PRK02224 502 EDLVEAEDRIERLEERREDLEELIAERRETIEEKRERAEELRERAAELEAEAEEKREAAAEAEEEaeeareevaELNSKL 581
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 974 DIKNNHLEMDIPVSTLIKKIDDLTAKLETASSKCLHLGKKNQLLQQELLLMRTiqkkcgklekNKKQLEQEVVNLRshME 1053
Cdd:PRK02224 582 AELKERIESLERIRTLLAAIADAEDEIERLREKREALAELNDERRERLAEKRE----------RKRELEAEFDEAR--IE 649
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1907172253 1054 KNMVEHSQAQQYAREVEERARQdLVEKLKQVNLFLQAQAASQESLEQLRENsnasvRSQMELRIKDLES 1122
Cdd:PRK02224 650 EAREDKERAEEYLEQVEEKLDE-LREERDDLQAEIGAVENELEELEELRER-----REALENRVEALEA 712
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
339-1176 |
4.97e-10 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 64.32 E-value: 4.97e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 339 KLKRMENKYKGLQKEMSETEEVKSRLEHEKVGWEQELCRLRFALKQEEEKRRSADQLSEKTSEQLRRKGEQCQSEVEAR- 417
Cdd:TIGR02169 217 LKEKREYEGYELLKEKEALERQKEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLGEEEQLRVKEKi 296
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 418 QQLEASLRTLEMELKTVKSHLNQVLEERNETQRQLSReqnarmlqdgilashlcKQKEIEMTQKKMTSEvsvshEKEKDl 497
Cdd:TIGR02169 297 GELEAEIASLERSIAEKERELEDAEERLAKLEAEIDK-----------------LLAEIEELEREIEEE-----RKRRD- 353
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 498 lhknqRLQDEVAVLRLEMDTIKSHNQEKEKRYlediKIANEKNDNLQrmvklneetftKTIFQYTGQLNSLKAEntmlss 577
Cdd:TIGR02169 354 -----KLTEEYAELKEELEDLRAELEEVDKEF----AETRDELKDYR-----------EKLEKLKREINELKRE------ 407
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 578 kLDNEKQNKERLETDVESFRSRLASALHDHAEIQTAKRDLEIAFQRARDEWFRVKDKMnfdmsnlrdnnEVLSQQLSKTE 657
Cdd:TIGR02169 408 -LDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADL-----------SKYEQELYDLK 475
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 658 RKLNSLEIEFHhtkdELREKTLALKHAQRDLSQTQCQMKEVEHMFQDEQGKVSKFMGKQESIEER--------------- 722
Cdd:TIGR02169 476 EEYDRVEKELS----KLQRELAEAEAQARASEERVRGGRAVEEVLKASIQGVHGTVAQLGSVGERyataievaagnrlnn 551
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 723 -------------------------------LAQLQSENTLLRQQ--LDDAANKAESKDKTIVNIQDQFQDVLTRFQAES 769
Cdd:TIGR02169 552 vvveddavakeaiellkrrkagratflplnkMRDERRDLSILSEDgvIGFAVDLVEFDPKYEPAFKYVFGDTLVVEDIEA 631
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 770 QRH---SLRLEDRNQELVSECSHL----RERLCQYENEKAEREVVvrqlqQELADTLKKQSMSEASLEVSSRYRSNLEEE 842
Cdd:TIGR02169 632 ARRlmgKYRMVTLEGELFEKSGAMtggsRAPRGGILFSRSEPAEL-----QRLRERLEGLKRELSSLQSELRRIENRLDE 706
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 843 AR----DLKKKLGQLRSQLQEARDQHREAVHHAEKMEDHLQKLELEKSKFEITIKKQSEEIDQLQENLSRVNLSEED--- 915
Cdd:TIGR02169 707 LSqelsDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEALNDlea 786
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 916 ---KEKLQKLTELKESLECTVDQEQKRSSALEKELAEFKEVLKMTKKELNEYENRELNLRQDIKNNHLEMDipvsTLIKK 992
Cdd:TIGR02169 787 rlsHSRIPEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIE----NLNGK 862
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 993 IDDLTAKLETASSKCLHLGKKNQLLQQELLLMrtiQKKCGKLEKNKKQLEQEVVNLRSHMEKNMVEHSQAQQYAREVEER 1072
Cdd:TIGR02169 863 KEELEEELEELEAALRDLESRLGDLKKERDEL---EAQLRELERKIEELEAQIEKKRKRLSELKAKLEALEEELSEIEDP 939
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 1073 ARQDL--------VEKLKQVNLFLQAQAASQESLEQLRENSNASVrsqmELRIKDLESQLYRMKAQEDFDKIELEKYKQL 1144
Cdd:TIGR02169 940 KGEDEeipeeelsLEDVQAELQRVEEEIRALEPVNMLAIQEYEEV----LKRLDELKEKRAKLEEERKAILERIEEYEKK 1015
|
890 900 910
....*....|....*....|....*....|...
gi 1907172253 1145 YQEEF-RARKSLSSKLNKTSEKLEEASSKLLLE 1176
Cdd:TIGR02169 1016 KREVFmEAFEAINENFNEIFAELSGGTGELILE 1048
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
336-975 |
4.05e-09 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 61.24 E-value: 4.05e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 336 LTGKLKRM-ENKYKGLQKEMSETEEVKSRLEHEKVGWEQELCRLRFALKQEEEKRRS----ADQLSEKTSEQLRRKgEQC 410
Cdd:TIGR02169 277 LNKKIKDLgEEEQLRVKEKIGELEAEIASLERSIAEKERELEDAEERLAKLEAEIDKllaeIEELEREIEEERKRR-DKL 355
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 411 QSEVEAR-----------QQLEASLRTLEMELKTVKSHLNQVLEERNETQRQLSREQNARMLQDGILASHLCKQKEIEMT 479
Cdd:TIGR02169 356 TEEYAELkeeledlraelEEVDKEFAETRDELKDYREKLEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAK 435
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 480 QKKMTSEVSVSHEKEKDLLHKNQRLQDEVAVLRLEMDTIKSHNQEKEKRY---------LEDIKIANEKNDNLQRMVKLN 550
Cdd:TIGR02169 436 INELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELsklqrelaeAEAQARASEERVRGGRAVEEV 515
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 551 EETFTKTIFQYTGQLNSLKAE----------NTMLSSKLDNEKQNKERLE---------------TDVESFRsRLASALH 605
Cdd:TIGR02169 516 LKASIQGVHGTVAQLGSVGERyataievaagNRLNNVVVEDDAVAKEAIEllkrrkagratflplNKMRDER-RDLSILS 594
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 606 DHAEIQTAKRDLEIAFQRARDEWFRVKDKMNFD--------MSNLR---------------------------------D 644
Cdd:TIGR02169 595 EDGVIGFAVDLVEFDPKYEPAFKYVFGDTLVVEdieaarrlMGKYRmvtlegelfeksgamtggsraprggilfsrsepA 674
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 645 NNEVLSQQLSKTERKLNSLEIEFHHTKDELREKTLALKHAQRDLSQTQcqmKEVEHMFQDEQgkvsKFMGKQESIEERLA 724
Cdd:TIGR02169 675 ELQRLRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIE---KEIEQLEQEEE----KLKERLEELEEDLS 747
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 725 QLQSENTLLRQQLDDAANKAESKDKTIVNIQDQFQDVLTR----FQAESQRHSLRLEDRNQELVSECSHLRERLCQYENE 800
Cdd:TIGR02169 748 SLEQEIENVKSELKELEARIEELEEDLHKLEEALNDLEARlshsRIPEIQAELSKLEEEVSRIEARLREIEQKLNRLTLE 827
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 801 KAEREVVVRQLQQELADTLKKQSMSEASLEVSSRYRSNLEEEARDLKKKLGQLRSQLQEARDQHREAVHHAEKMEDHLQK 880
Cdd:TIGR02169 828 KEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKERDELEAQLRELERKIEE 907
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 881 LELEKSKFEITIKKQSEEIDQLQENLSRV-------------NLSEED-KEKLQKLTELKESLE---CTVDQEQKRSSAL 943
Cdd:TIGR02169 908 LEAQIEKKRKRLSELKAKLEALEEELSEIedpkgedeeipeeELSLEDvQAELQRVEEEIRALEpvnMLAIQEYEEVLKR 987
|
730 740 750
....*....|....*....|....*....|..
gi 1907172253 944 EKELAEFKEVLKMTKKELNEYENRELNLRQDI 975
Cdd:TIGR02169 988 LDELKEKRAKLEEERKAILERIEEYEKKKREV 1019
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
609-1189 |
4.76e-09 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 61.01 E-value: 4.76e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 609 EIQTAKRDLEIAFQRARDEWFRVKDKMNFDMSNLRdnnevlsQQLSKTERKLNSLEiEFHHTKDELREKTLALKHAQRDL 688
Cdd:pfam12128 280 ERQETSAELNQLLRTLDDQWKEKRDELNGELSAAD-------AAVAKDRSELEALE-DQHGAFLDADIETAAADQEQLPS 351
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 689 SQTQCQMKEVEH-MFQDEQGKVskfmgkQESIEERLAQLQSEN-TLLRQQLDDAANKAESKDKTIVNIQDQFQDVLTRFQ 766
Cdd:pfam12128 352 WQSELENLEERLkALTGKHQDV------TAKYNRRRSKIKEQNnRDIAGIKDKLAKIREARDRQLAVAEDDLQALESELR 425
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 767 AESQRHSLRLEDRNQELVSECSHLRERL--CQYENE----KAEREVVVRQLQQELADTLKKQSMSEASLEVSSRYRSNLE 840
Cdd:pfam12128 426 EQLEAGKLEFNEEEYRLKSRLGELKLRLnqATATPElllqLENFDERIERAREEQEAANAEVERLQSELRQARKRRDQAS 505
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 841 EEARDLKKKLGQLRSQLQEARDQHREAVH--------HAEKMEDHLQKL---EL------------EKSKFEITIKKQSE 897
Cdd:pfam12128 506 EALRQASRRLEERQSALDELELQLFPQAGtllhflrkEAPDWEQSIGKVispELlhrtdldpevwdGSVGGELNLYGVKL 585
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 898 EIDQLQENlSRVNLSEEDKEKLQKLTElkeslecTVDQEQKRSSALEKELAEFKEVLKMTKKELNE----YENRELNLRQ 973
Cdd:pfam12128 586 DLKRIDVP-EWAASEEELRERLDKAEE-------ALQSAREKQAAAEEQLVQANGELEKASREETFartaLKNARLDLRR 657
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 974 diknnhlemdipvstlikkiddLTAKLETASSKClhlgkknqlLQQELLLMRTIQKKCGKLEKNKKQLEQEVVNLRSHME 1053
Cdd:pfam12128 658 ----------------------LFDEKQSEKDKK---------NKALAERKDSANERLNSLEAQLKQLDKKHQAWLEEQK 706
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 1054 KNMVEHSQAQQYAREVEERARQDLVEKLKQVNLFLQAQAASQES-LEQLRENSNAS------VRSQMELRIKDLESQLYR 1126
Cdd:pfam12128 707 EQKREARTEKQAYWQVVEGALDAQLALLKAAIAARRSGAKAELKaLETWYKRDLASlgvdpdVIAKLKREIRTLERKIER 786
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1907172253 1127 MKAqedfDKIELEKYKQLYQEEFRARK-SLSSKLNKTSEKLEEASSKLLLEEQQNRSLLSTLST 1189
Cdd:pfam12128 787 IAV----RRQEVLRYFDWYQETWLQRRpRLATQLSNIERAISELQQQLARLIADTKLRRAKLEM 846
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
382-1043 |
7.51e-09 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 60.37 E-value: 7.51e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 382 LKQEEEKRRSADQLSEKTSEQLRRKGEQcQSEVEARQQLEASLRTLEMELKTVKSHLNQVLEERNEtQRQLSReqnarml 461
Cdd:TIGR00618 224 LEKELKHLREALQQTQQSHAYLTQKREA-QEEQLKKQQLLKQLRARIEELRAQEAVLEETQERINR-ARKAAP------- 294
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 462 qdgiLASHLCKQKEIEMTQKKMTSEVSVSHEKEKDLLHKNQRLQDEVAVLRLEMDTIKSHNQEKEKryledIKIANEKnD 541
Cdd:TIGR00618 295 ----LAAHIKAVTQIEQQAQRIHTELQSKMRSRAKLLMKRAAHVKQQSSIEEQRRLLQTLHSQEIH-----IRDAHEV-A 364
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 542 NLQRMVKLNEETFTKTIFQYTGQLNSLKAENTMLSSKLDNEKQNKERLETDVESFRSRLASALHDHAEIQTAKRDLEIAF 621
Cdd:TIGR00618 365 TSIREISCQQHTLTQHIHTLQQQKTTLTQKLQSLCKELDILQREQATIDTRTSAFRDLQGQLAHAKKQQELQQRYAELCA 444
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 622 QRARDEWFRVKDKmNFDMSNLRDNNEVLSQQLSKTE---RKLNSLEIEFHHTKDELREKTLALKHAQRDLSQ-------- 690
Cdd:TIGR00618 445 AAITCTAQCEKLE-KIHLQESAQSLKEREQQLQTKEqihLQETRKKAVVLARLLELQEEPCPLCGSCIHPNParqdidnp 523
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 691 --TQCQMKEVEHMFQDEQGKVSKFMGKQESIEERLAQLQSENTLLRQQLDDAANKAESKDKTIVNIQDQFQDVLTRFQAE 768
Cdd:TIGR00618 524 gpLTRRMQRGEQTYAQLETSEEDVYHQLTSERKQRASLKEQMQEIQQSFSILTQCDNRSKEDIPNLQNITVRLQDLTEKL 603
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 769 SQ-RHSLRLEDRNQELVSECSHLRERLCQYENEKAEREVVVRQLQQELADTLKKQSMSEASLEV------SSRYRSNLEE 841
Cdd:TIGR00618 604 SEaEDMLACEQHALLRKLQPEQDLQDVRLHLQQCSQELALKLTALHALQLTLTQERVREHALSIrvlpkeLLASRQLALQ 683
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 842 EARDLKKKLGQLRSQLQEARDQHREAVHHAEKMEDHLQKLELEKSKFEITIKKQSEEIDQLQENLSRvnlseEDKEKLQK 921
Cdd:TIGR00618 684 KMQSEKEQLTYWKEMLAQCQTLLRELETHIEEYDREFNEIENASSSLGSDLAAREDALNQSLKELMH-----QARTVLKA 758
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 922 LTELKESLECTVDQEQKRSSALEKELAEFKEVLKMTKKELNEYENRELNLRQDIKNNHLEMDIPVSTLIKKIDDLTAKLE 1001
Cdd:TIGR00618 759 RTEAHFNNNEEVTAALQTGAELSHLAAEIQFFNRLREEDTHLLKTLEAEIGQEIPSDEDILNLQCETLVQEEEQFLSRLE 838
|
650 660 670 680
....*....|....*....|....*....|....*....|..
gi 1907172253 1002 TASSKclhlgkknqllqqelllMRTIQKKCGKLEKNKKQLEQ 1043
Cdd:TIGR00618 839 EKSAT-----------------LGEITHQLLKYEECSKQLAQ 863
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
336-862 |
1.00e-08 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 60.13 E-value: 1.00e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 336 LTGKLKRMENKYKGLQKEMSETEEVKSRLEHEKVGWEQELCRLRFALKQEEEKRRSADQLSEKTSEQLRRKGEQCQSEVE 415
Cdd:pfam15921 375 LDDQLQKLLADLHKREKELSLEKEQNKRLWDRDTGNSITIDHLRRELDDRNMEVQRLEALLKAMKSECQGQMERQMAAIQ 454
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 416 ARQQLEASLRTLEMELKTVKSHLNQVLEERneTQRQLSREQNARMLQDgILASHLCKQKEIEMTQKKMTSEVSVSHEKEK 495
Cdd:pfam15921 455 GKNESLEKVSSLTAQLESTKEMLRKVVEEL--TAKKMTLESSERTVSD-LTASLQEKERAIEATNAEITKLRSRVDLKLQ 531
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 496 DLLH-KNQrlQDEVAVLRLEMDTIKSHNQEKEKRyledIKIANEKNDNLQRMVKLNEETFTKTIF---QYTGQLNSLK-- 569
Cdd:pfam15921 532 ELQHlKNE--GDHLRNVQTECEALKLQMAEKDKV----IEILRQQIENMTQLVGQHGRTAGAMQVekaQLEKEINDRRle 605
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 570 -AENTMLSSKLDNEKQNKERLETDVESFRSRLASA----LHDHAEIQTAKRDLEIAFQRARDEWFRVKDKMNFDMSNLRD 644
Cdd:pfam15921 606 lQEFKILKDKKDAKIRELEARVSDLELEKVKLVNAgserLRAVKDIKQERDQLLNEVKTSRNELNSLSEDYEVLKRNFRN 685
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 645 NNEVLSQQLSKTERKLNSLEIEFHHTKDELR----------------EKTLALKHAQRDLSQTQCQMKEV--------EH 700
Cdd:pfam15921 686 KSEEMETTTNKLKMQLKSAQSELEQTRNTLKsmegsdghamkvamgmQKQITAKRGQIDALQSKIQFLEEamtnankeKH 765
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 701 MFQDEQGKVSKFMGKQESIEERLA-QLQSENTLLRQQLDDAANKAESKDKTIVNIQdQFQDVLTRFQAESQR----HSLR 775
Cdd:pfam15921 766 FLKEEKNKLSQELSTVATEKNKMAgELEVLRSQERRLKEKVANMEVALDKASLQFA-ECQDIIQRQEQESVRlklqHTLD 844
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 776 LEDRNQELVSECSHLRERLCQYENEKAEREVVVRQlqQELADTLKKQSMSEASLEvssryrsnlEEEARDLKKKLGQLRS 855
Cdd:pfam15921 845 VKELQGPGYTSNSSMKPRLLQPASFTRTHSNVPSS--QSTASFLSHHSRKTNALK---------EDPTRDLKQLLQELRS 913
|
....*..
gi 1907172253 856 QLQEARD 862
Cdd:pfam15921 914 VINEEPT 920
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
715-1173 |
1.16e-08 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 59.69 E-value: 1.16e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 715 KQESIEERLAQLQSENTLLRQQLDDAANKAESKDKTIVNIQDQFQDVLTRFQaesqrhslRLEDRNQELVSECSHLRERL 794
Cdd:PRK03918 159 DYENAYKNLGEVIKEIKRRIERLEKFIKRTENIEELIKEKEKELEEVLREIN--------EISSELPELREELEKLEKEV 230
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 795 CQYENEKAEREvvvrQLQQELADTLKKQSMSEASLEVSSRYRSNLEEEARDLKKKLGQLRSqLQEARDQHREAVHHAEKM 874
Cdd:PRK03918 231 KELEELKEEIE----ELEKELESLEGSKRKLEEKIRELEERIEELKKEIEELEEKVKELKE-LKEKAEEYIKLSEFYEEY 305
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 875 EDHLQKLELEKSKFEITIKKQSEEIDQLQENLSRVN-LSEEDKEKLQKLTELKESLEC--TVDQEQKRSSALEKELAEfk 951
Cdd:PRK03918 306 LDELREIEKRLSRLEEEINGIEERIKELEEKEERLEeLKKKLKELEKRLEELEERHELyeEAKAKKEELERLKKRLTG-- 383
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 952 EVLKMTKKELNEYENRELNLRQDIKNnHLEMDIPVSTLIKKIDDLTAKLETASSKCLHLGK------KNQLLQQELLLMR 1025
Cdd:PRK03918 384 LTPEKLEKELEELEKAKEEIEEEISK-ITARIGELKKEIKELKKAIEELKKAKGKCPVCGRelteehRKELLEEYTAELK 462
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 1026 TIQKKCGKLEKNKKQLEQEVVNLRSHMEK------------------------NMVEHSQAQQYAREVEERARQ------ 1075
Cdd:PRK03918 463 RIEKELKEIEEKERKLRKELRELEKVLKKeseliklkelaeqlkeleeklkkyNLEELEKKAEEYEKLKEKLIKlkgeik 542
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 1076 DLVEKLKQVNLFLQAQAASQESLEQLRENSNASVRSQMELRIKDLESQLYRMKAQEDFDK--IELEKYKQLYQEEFRARK 1153
Cdd:PRK03918 543 SLKKELEKLEELKKKLAELEKKLDELEEELAELLKELEELGFESVEELEERLKELEPFYNeyLELKDAEKELEREEKELK 622
|
490 500
....*....|....*....|
gi 1907172253 1154 SLSSKLNKTSEKLEEASSKL 1173
Cdd:PRK03918 623 KLEEELDKAFEELAETEKRL 642
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
405-1130 |
3.33e-08 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 58.26 E-value: 3.33e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 405 RKGEQCQSEVEARQQLEASLRTLEMELKTVKSHLNQVLEERNETQRQLSREQNARMLQDGILASHLCKQKEIEMTQKKMT 484
Cdd:pfam01576 2 RQEEEMQAKEEELQKVKERQQKAESELKELEKKHQQLCEEKNALQEQLQAETELCAEAEEMRARLAARKQELEEILHELE 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 485 SEVSVSHEKEKDLLHKNQRLQDEVAVLRLEMDTIKSHNQE----------KEKRYLEDIKIANEKNDNLQRMVKLNEEtf 554
Cdd:pfam01576 82 SRLEEEEERSQQLQNEKKKMQQHIQDLEEQLDEEEAARQKlqlekvtteaKIKKLEEDILLLEDQNSKLSKERKLLEE-- 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 555 tkTIFQYTGQLnslkAENTMLSSKLDNEKQNKERLETDVEsfrSRLASALHDHAEIQTAKRDLEIAFQRARDEwfrvkdk 634
Cdd:pfam01576 160 --RISEFTSNL----AEEEEKAKSLSKLKNKHEAMISDLE---ERLKKEEKGRQELEKAKRKLEGESTDLQEQ------- 223
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 635 mnfdMSNLRDNNEVLSQQLSKTERKLNSLEiefhhtkDELREKTLALKHAQRDLSQTQCQMKEVEHMFQDEQGKVSKFMG 714
Cdd:pfam01576 224 ----IAELQAQIAELRAQLAKKEEELQAAL-------ARLEEETAQKNNALKKIRELEAQISELQEDLESERAARNKAEK 292
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 715 KQESIEERLAQLQSEntlLRQQLDDAANKAESKDKtivniQDQFQDVLTR-FQAESQRHSLRLEDRNQELVSECSHLRER 793
Cdd:pfam01576 293 QRRDLGEELEALKTE---LEDTLDTTAAQQELRSK-----REQEVTELKKaLEEETRSHEAQLQEMRQKHTQALEELTEQ 364
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 794 LCQYENEKAEREVVVRQLQQELADTlkkqsmsEASLEVSSRYRSNLEEEARDLKKKLGQLRSQLQEARDQHREAVHHAEK 873
Cdd:pfam01576 365 LEQAKRNKANLEKAKQALESENAEL-------QAELRTLQQAKQDSEHKRKKLEGQLQELQARLSESERQRAELAEKLSK 437
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 874 MEDHLQKLELEKSKFEITIKKQSEEIDQLQENLSRVN--LSEEDKEKLQ------KLTELKESLECTVDQEQKRSSALEK 945
Cdd:pfam01576 438 LQSELESVSSLLNEAEGKNIKLSKDVSSLESQLQDTQelLQEETRQKLNlstrlrQLEDERNSLQEQLEEEEEAKRNVER 517
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 946 ELAEFKEVLKMTKKELNEYENRELNLRQDIKNnhlemdipvstLIKKIDDLTAKLETASSKCLHLGKKNQLLQQELLLMR 1025
Cdd:pfam01576 518 QLSTLQAQLSDMKKKLEEDAGTLEALEEGKKR-----------LQRELEALTQQLEEKAAAYDKLEKTKNRLQQELDDLL 586
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 1026 TIQKK----CGKLEKNKKQLEQEVVNLRSHMEKNMVEHSQAQQYAREVE------ERARQDLVEKLKQVNLFLQAQAASQ 1095
Cdd:pfam01576 587 VDLDHqrqlVSNLEKKQKKFDQMLAEEKAISARYAEERDRAEAEAREKEtralslARALEEALEAKEELERTNKQLRAEM 666
|
730 740 750
....*....|....*....|....*....|....*
gi 1907172253 1096 ESLEQLRENSNASVRsQMELRIKDLESQLYRMKAQ 1130
Cdd:pfam01576 667 EDLVSSKDDVGKNVH-ELERSKRALEQQVEEMKTQ 700
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
340-1125 |
3.66e-08 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 58.21 E-value: 3.66e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 340 LKRMENKYKGLQKEMSETEEVKsrlEHEKVGWEQELCRLRFALKQEEEKRrsaDQLSEktseqLRRKGEQCQSEVeaRQQ 419
Cdd:pfam15921 80 LEEYSHQVKDLQRRLNESNELH---EKQKFYLRQSVIDLQTKLQEMQMER---DAMAD-----IRRRESQSQEDL--RNQ 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 420 LEASLRtlemELKTVKSHLNQVLEERNETQRQLSR---------EQNARMLQDGILASHLCKQKEIEMTQKKMTSEVSVS 490
Cdd:pfam15921 147 LQNTVH----ELEAAKCLKEDMLEDSNTQIEQLRKmmlshegvlQEIRSILVDFEEASGKKIYEHDSMSTMHFRSLGSAI 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 491 HEKEKDLLHKNQRLQDEVAVLRLEMDTIKSHNQEKEKRYLEdikianEKNDNLQRMVKLNE---ETFTKTIFQYTGQLNS 567
Cdd:pfam15921 223 SKILRELDTEISYLKGRIFPVEDQLEALKSESQNKIELLLQ------QHQDRIEQLISEHEveiTGLTEKASSARSQANS 296
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 568 LKAENTMLSSKLDNEKQNKERLETDVESFRSRLASALHD-----HAEIQTAKRDLEIA---FQRARDEwfrvKDKMNFDM 639
Cdd:pfam15921 297 IQSQLEIIQEQARNQNSMYMRQLSDLESTVSQLRSELREakrmyEDKIEELEKQLVLAnseLTEARTE----RDQFSQES 372
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 640 SNLRDNNEVLSQQLSKTERKLNSLEIEFHHTKDELREKTLALKHAQRDLSQTQCQMKEVEHMFQ----DEQGKVSKFM-- 713
Cdd:pfam15921 373 GNLDDQLQKLLADLHKREKELSLEKEQNKRLWDRDTGNSITIDHLRRELDDRNMEVQRLEALLKamksECQGQMERQMaa 452
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 714 --GKQESIEE---RLAQLQSENTLLRQQLDDAANKA---ESKDKTIVNIQDQFQDVLTRFQAESQRHSlRLEDRNQELVS 785
Cdd:pfam15921 453 iqGKNESLEKvssLTAQLESTKEMLRKVVEELTAKKmtlESSERTVSDLTASLQEKERAIEATNAEIT-KLRSRVDLKLQ 531
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 786 ECSHLRERLCQYENEKAEREVVVRQLQQEladtlkkqsmsEASLEVssryrsnLEEEARDLKKKLGQlrsqlqEARDQHR 865
Cdd:pfam15921 532 ELQHLKNEGDHLRNVQTECEALKLQMAEK-----------DKVIEI-------LRQQIENMTQLVGQ------HGRTAGA 587
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 866 EAVHHAEkMEDHLQKLELEKSKFEITIKKQSEEIDQLQENLSRVNLseedkEKLQKLTELKESLECTVDQEQKRSSALEK 945
Cdd:pfam15921 588 MQVEKAQ-LEKEINDRRLELQEFKILKDKKDAKIRELEARVSDLEL-----EKVKLVNAGSERLRAVKDIKQERDQLLNE 661
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 946 elaefkevLKMTKKELNEYENRELNLRQDIKNNHLEMDIPVSTLIKKIDDLTAKLETASSKCLHL-GKKNQLLQQELLLM 1024
Cdd:pfam15921 662 --------VKTSRNELNSLSEDYEVLKRNFRNKSEEMETTTNKLKMQLKSAQSELEQTRNTLKSMeGSDGHAMKVAMGMQ 733
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 1025 RTIQKKCGKLE--KNKKQLEQEVV---NLRSHM---EKNMVEH------SQAQQYAREVEERARQDLVEKLKQVNLFLQA 1090
Cdd:pfam15921 734 KQITAKRGQIDalQSKIQFLEEAMtnaNKEKHFlkeEKNKLSQelstvaTEKNKMAGELEVLRSQERRLKEKVANMEVAL 813
|
810 820 830 840
....*....|....*....|....*....|....*....|
gi 1907172253 1091 QAASQESLE-----QLRENSNASVRSQMELRIKDLESQLY 1125
Cdd:pfam15921 814 DKASLQFAEcqdiiQRQEQESVRLKLQHTLDVKELQGPGY 853
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
777-1188 |
2.28e-07 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 55.46 E-value: 2.28e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 777 EDRNQELVSECSHLRERLCQYENEKAEREVVVRQLQQELADTLKKQSMSEASLEVSSRYRSNLEEEARDLKKklgqLRSQ 856
Cdd:PRK03918 164 YKNLGEVIKEIKRRIERLEKFIKRTENIEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKELEE----LKEE 239
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 857 LQEARDQhreavhhAEKMEDHLQKLELEKSKFEITIKKQSEEIDQLQENLSRVNLSEEDKEKLQKLTELKESLECTVDQE 936
Cdd:PRK03918 240 IEELEKE-------LESLEGSKRKLEEKIRELEERIEELKKEIEELEEKVKELKELKEKAEEYIKLSEFYEEYLDELREI 312
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 937 QKRSSALEKELAEFKEVLK---MTKKELNEYENRELNLRQDIknNHLEMDIPVSTLIKKIDDLTAKLEtASSKCLHLGKK 1013
Cdd:PRK03918 313 EKRLSRLEEEINGIEERIKeleEKEERLEELKKKLKELEKRL--EELEERHELYEEAKAKKEELERLK-KRLTGLTPEKL 389
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 1014 NQLLQQELLLMRTIQKKCGKLEKNKKQLEQEVVNLRSHMEKNMVEHSQAQQYAREVEERARQDLVEK-LKQVNLFLQAQA 1092
Cdd:PRK03918 390 EKELEELEKAKEEIEEEISKITARIGELKKEIKELKKAIEELKKAKGKCPVCGRELTEEHRKELLEEyTAELKRIEKELK 469
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 1093 ASQESLEQLREN-----------SNASVRSQMELRIKDLESQLyrmkaqEDFDKIELEKYKQLYQ---EEFRARKSLSSK 1158
Cdd:PRK03918 470 EIEEKERKLRKElrelekvlkkeSELIKLKELAEQLKELEEKL------KKYNLEELEKKAEEYEklkEKLIKLKGEIKS 543
|
410 420 430
....*....|....*....|....*....|
gi 1907172253 1159 LNKTSEKLEEASSKLLLEEQQNRSLLSTLS 1188
Cdd:PRK03918 544 LKKELEKLEELKKKLAELEKKLDELEEELA 573
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
340-1002 |
3.07e-07 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 55.03 E-value: 3.07e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 340 LKRMENKYKGLQKEMSETEEVKSRLEHEKVGWEQELCRLRFALKQEEEKRRSADQLSEKTSEQLRRKGEQcqseveaRQQ 419
Cdd:TIGR04523 49 LKNKEKELKNLDKNLNKDEEKINNSNNKIKILEQQIKDLNDKLKKNKDKINKLNSDLSKINSEIKNDKEQ-------KNK 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 420 LEASLRTLEMELKTVKSHLNQVLEERNETQRQLSREQNArmlqdgilASHLCKQKEIEMTQKKMTSEVSVSHEKEKDLLh 499
Cdd:TIGR04523 122 LEVELNKLEKQKKENKKNIDKFLTEIKKKEKELEKLNNK--------YNDLKKQKEELENELNLLEKEKLNIQKNIDKI- 192
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 500 KNQRLQDEVAVLRLEmdTIKSHNQEKEKRYLEDIKIANEKNDNLQRmvKLNEETFTKTIFQYT-GQLNSLKAENTMLSSK 578
Cdd:TIGR04523 193 KNKLLKLELLLSNLK--KKIQKNKSLESQISELKKQNNQLKDNIEK--KQQEINEKTTEISNTqTQLNQLKDEQNKIKKQ 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 579 LDNEKQNKERLETDVESFRsrlasalhdhAEIQTAKRDLEIAFQRARDEWFRvkdKMNFDMSNLRDNNEVLSQQLSKTER 658
Cdd:TIGR04523 269 LSEKQKELEQNNKKIKELE----------KQLNQLKSEISDLNNQKEQDWNK---ELKSELKNQEKKLEEIQNQISQNNK 335
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 659 KLNSLEIEFHHTKDELREKTLALKHAQRDLSQTQCQMKEVEHmfqdeqgkvskfmgKQESIEERLAQLQSENTLLRQQLD 738
Cdd:TIGR04523 336 IISQLNEQISQLKKELTNSESENSEKQRELEEKQNEIEKLKK--------------ENQSYKQEIKNLESQINDLESKIQ 401
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 739 DAANKAESKDKTIVNIQDQFQdvltrfqaesqrhslRLEDRNQELVSECSHLRERLCQYENEKAEREVVVRQLQQeLADT 818
Cdd:TIGR04523 402 NQEKLNQQKDEQIKKLQQEKE---------------LLEKEIERLKETIIKNNSEIKDLTNQDSVKELIIKNLDN-TRES 465
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 819 LKKQsMSEASLEVSSrYRSNLEEEARDLKKK---LGQLRSQLQEARDQHREAVHHAEKMEDHLQKLELEKSKFEITIKKQ 895
Cdd:TIGR04523 466 LETQ-LKVLSRSINK-IKQNLEQKQKELKSKekeLKKLNEEKKELEEKVKDLTKKISSLKEKIEKLESEKKEKESKISDL 543
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 896 SEEIDQLQENLSRVNLSEEDKEKLQKLTELKEslecTVDQEQKRSSALEKELAEFKEVLKMTKKELNEYENRELNLRQDI 975
Cdd:TIGR04523 544 EDELNKDDFELKKENLEKEIDEKNKEIEELKQ----TQKSLKKKQEEKQELIDQKEKEKKDLIKEIEEKEKKISSLEKEL 619
|
650 660
....*....|....*....|....*..
gi 1907172253 976 KNNHLEMDiPVSTLIKKIDDLTAKLET 1002
Cdd:TIGR04523 620 EKAKKENE-KLSSIIKNIKSKKNKLKQ 645
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
477-1173 |
3.33e-07 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 55.07 E-value: 3.33e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 477 EMTQKKMTSEVSVSHEKEKDLLHKNQRLQDEVAVLRLEMDTIKSHNQEKEKRYLEDIKIANEKNDNLQRMVKLNEETFTK 556
Cdd:TIGR02169 215 ALLKEKREYEGYELLKEKEALERQKEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLGEEEQLRVKE 294
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 557 TIFQYTGQLNSLK--------------AENTMLSSKLDNEKQNKERLETDVESFRSRLASALhdhAEIQTAKRDLEIAFQ 622
Cdd:TIGR02169 295 KIGELEAEIASLErsiaekereledaeERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLT---EEYAELKEELEDLRA 371
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 623 RARDEwfrvkDKmnfDMSNLRDNNEVLSQQLSKTERKLNSLEIEFHHTKDELREKTLALKHAQRDLSQTQCQMKEVEHMF 702
Cdd:TIGR02169 372 ELEEV-----DK---EFAETRDELKDYREKLEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEK 443
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 703 QDEQGKVSKFMGKQESIEERLAQLQSENTLLRQQLDDAANKAESKDKTIVNIQDQfQDVLTRFQAESQRHSLRLEDRNQE 782
Cdd:TIGR02169 444 EDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQRELAEAEAQ-ARASEERVRGGRAVEEVLKASIQG 522
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 783 LVSECSHLRERLCQY----ENEKAER--EVVVRQ--LQQELADTLKKQSMSEASLEVSSRYRSNLEEEARDLKKKLGQLR 854
Cdd:TIGR02169 523 VHGTVAQLGSVGERYataiEVAAGNRlnNVVVEDdaVAKEAIELLKRRKAGRATFLPLNKMRDERRDLSILSEDGVIGFA 602
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 855 SQLQEARDQHREAVHHA-------EKME---DHLQKLEL--------EKS-----------KFEITIKKQSEEIDQLQEN 905
Cdd:TIGR02169 603 VDLVEFDPKYEPAFKYVfgdtlvvEDIEaarRLMGKYRMvtlegelfEKSgamtggsraprGGILFSRSEPAELQRLRER 682
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 906 LSRVNLSEED-KEKLQKLTELKESLECTVDQEQKRSSALEKELAEFKEVLKMTKKELNEYENRELNLRQDIKNNHLEMDi 984
Cdd:TIGR02169 683 LEGLKRELSSlQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELK- 761
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 985 pvsTLIKKIDDLTAKLETasskcLHLGKKNQLLQQELLLMRTIQKKCGKLEKNKKQLEQEVVNLRSHMEKnmvehsqaQQ 1064
Cdd:TIGR02169 762 ---ELEARIEELEEDLHK-----LEEALNDLEARLSHSRIPEIQAELSKLEEEVSRIEARLREIEQKLNR--------LT 825
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 1065 YAREVEERARQDLVEKLKQVNLFLQAQAASQESLEQLRENSNASVRsQMELRIKDLESQLYRMKAQEDFDKIELEKYKQL 1144
Cdd:TIGR02169 826 LEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELE-ELEAALRDLESRLGDLKKERDELEAQLRELERK 904
|
730 740
....*....|....*....|....*....
gi 1907172253 1145 YQEEFRARKSLSSKLNKTSEKLEEASSKL 1173
Cdd:TIGR02169 905 IEELEAQIEKKRKRLSELKAKLEALEEEL 933
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
355-934 |
4.52e-07 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 54.66 E-value: 4.52e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 355 SETEEVKSRLEHEKV-GWEQELCRLRFALKQEEEKRRSADQLSEKTSEQLrrkgeqcqSEVEARQQleaslrtlemELKT 433
Cdd:PRK02224 194 AQIEEKEEKDLHERLnGLESELAELDEEIERYEEQREQARETRDEADEVL--------EEHEERRE----------ELET 255
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 434 VKSHLNQVLEERNETQRQlsREQNARmlqdgilashlckqkeiemtqkkmtsEVSVSHEKEKDLLHKNQRLQDEVAVLRL 513
Cdd:PRK02224 256 LEAEIEDLRETIAETERE--REELAE--------------------------EVRDLRERLEELEEERDDLLAEAGLDDA 307
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 514 EMDTIKSHNQEKEKRyledikiANEKNDNLQRmVKLNEETFTKTIFQYTGQLNSLKAENTMLSSKldnekqnKERLETDV 593
Cdd:PRK02224 308 DAEAVEARREELEDR-------DEELRDRLEE-CRVAAQAHNEEAESLREDADDLEERAEELREE-------AAELESEL 372
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 594 ESFRSRLASALHDHAEIQTAKRDLEIAFQRARDewfrvkdkmnfDMSNLRDNNEVLSQQLSKTERKLNSLEIEFHHTKDE 673
Cdd:PRK02224 373 EEAREAVEDRREEIEELEEEIEELRERFGDAPV-----------DLGNAEDFLEELREERDELREREAELEATLRTARER 441
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 674 LREktlalkhAQRDLSQTQC-----QMKEVEHMFQDEQGKVskfmgKQESIEERLAQLQSENTLLRQQLDDA--ANKAES 746
Cdd:PRK02224 442 VEE-------AEALLEAGKCpecgqPVEGSPHVETIEEDRE-----RVEELEAELEDLEEEVEEVEERLERAedLVEAED 509
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 747 KDKTIVNIQDQFQDVLTRFQAESQRHSLRLE---DRNQELVSECSHLRERLCQYENEKAEREVVVRQLQQELAdTLKKQS 823
Cdd:PRK02224 510 RIERLEERREDLEELIAERRETIEEKRERAEelrERAAELEAEAEEKREAAAEAEEEAEEAREEVAELNSKLA-ELKERI 588
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 824 MSEASLEVSSRYRSNLEEEARDLKKKLGQL-------RSQLQEARDQHREAvhHAEKMEDHLQKLELEKSKFEITIKKQS 896
Cdd:PRK02224 589 ESLERIRTLLAAIADAEDEIERLREKREALaelnderRERLAEKRERKREL--EAEFDEARIEEAREDKERAEEYLEQVE 666
|
570 580 590 600
....*....|....*....|....*....|....*....|..
gi 1907172253 897 EEIDQLQEN----LSRVNLSEEDKEKLQKLTELKESLECTVD 934
Cdd:PRK02224 667 EKLDELREErddlQAEIGAVENELEELEELRERREALENRVE 708
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
778-977 |
9.51e-07 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 52.84 E-value: 9.51e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 778 DRNQELVSECSHLRERLCQYENEKAEREVVVRQLQQELADTLKKQSMSEASLEVSSRYRSNLEEEARDLKKKLGQLRSQL 857
Cdd:COG4942 20 DAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAEL 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 858 QEARDQHREAVHHAEKMEDHLQKLELEKSK-----------FEITIKKQSEEIDQLQENLsrvnlsEEDKEKLQKLTELK 926
Cdd:COG4942 100 EAQKEELAELLRALYRLGRQPPLALLLSPEdfldavrrlqyLKYLAPARREQAEELRADL------AELAALRAELEAER 173
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 1907172253 927 ESLECTVDQEQKRSSALEKELAEFKEVLKMTKKELNEYENRELNLRQDIKN 977
Cdd:COG4942 174 AELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEE 224
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
346-1179 |
1.60e-06 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 52.67 E-value: 1.60e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 346 KYKGLQKEMSETEEVKSRLehekvGWEQELCRLRFALKQEEEKRRSADQLSEKtsEQLRRKGEQCQSEVEARQQLEASLR 425
Cdd:pfam02463 171 KKEALKKLIEETENLAELI-----IDLEELKLQELKLKEQAKKALEYYQLKEK--LELEEEYLLYLDYLKLNEERIDLLQ 243
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 426 TLEMELKTVKSHLNQVLEERNETQRQLSREQNARMLQDGILASHLC-KQKEIEMTQKKMTSEVSVSHEKEKDLLHKNQRL 504
Cdd:pfam02463 244 ELLRDEQEEIESSKQEIEKEEEKLAQVLKENKEEEKEKKLQEEELKlLAKEEEELKSELLKLERRKVDDEEKLKESEKEK 323
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 505 QDEVAVLRLEMDTIKSHNQEKEKRYLEDIKIANEKNDNLQRMVKL--NEETFTKTIFQYTGQLNSLKAENTMLSSKLDNE 582
Cdd:pfam02463 324 KKAEKELKKEKEEIEELEKELKELEIKREAEEEEEEELEKLQEKLeqLEEELLAKKKLESERLSSAAKLKEEELELKSEE 403
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 583 KQNKERLetdvesfrSRLASALHDHAEIQTAKRDLEIAFQRARDEWFRVKDKMNFDMSNLRDNNEV-LSQQLSKTERKLN 661
Cdd:pfam02463 404 EKEAQLL--------LELARQLEDLLKEEKKEELEILEEEEESIELKQGKLTEEKEELEKQELKLLkDELELKKSEDLLK 475
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 662 SLEIEFHHTKDELREKTLALKHAQRDLSQTQCQMKEVEHMFQD-EQGKVSKFMGKQESIEERLAQLQSENTLLRQQLDDA 740
Cdd:pfam02463 476 ETQLVKLQEQLELLLSRQKLEERSQKESKARSGLKVLLALIKDgVGGRIISAHGRLGDLGVAVENYKVAISTAVIVEVSA 555
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 741 ANKAESKDKTIVNIQDQFQDVLTRFQAESqRHSLRLEDRNQELVSECSHLRERLCQYENEKAEREVVVRQLQQELADTLK 820
Cdd:pfam02463 556 TADEVEERQKLVRALTELPLGARKLRLLI-PKLKLPLKSIAVLEIDPILNLAQLDKATLEADEDDKRAKVVEGILKDTEL 634
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 821 KQSMSEASLEVSSRYRSNLEEEARDLKKKLGQLRSQLQEARdqhreavhHAEKMEDHLQKLELEKSKFEITIKKQSEEID 900
Cdd:pfam02463 635 TKLKESAKAKESGLRKGVSLEEGLAEKSEVKASLSELTKEL--------LEIQELQEKAESELAKEEILRRQLEIKKKEQ 706
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 901 QLQENLSRVNLSEEDKEKLQKLTELKESLECTVDQEQKRSSALEKELAEFKEVLKMTKKELNEYENRELNLRQDIKNNHL 980
Cdd:pfam02463 707 REKEELKKLKLEAEELLADRVQEAQDKINEELKLLKQKIDEEEEEEEKSRLKKEEKEEEKSELSLKEKELAEEREKTEKL 786
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 981 EMDIPVSTLIKKIDDLTAKLETASSKCLHLGKKNQLLQQELLLMRTIQKKCGKLEKNKKQLEQEVVNLRSHMEKNMVEhs 1060
Cdd:pfam02463 787 KVEEEKEEKLKAQEEELRALEEELKEEAELLEEEQLLIEQEEKIKEEELEELALELKEEQKLEKLAEEELERLEEEIT-- 864
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 1061 QAQQYAREVEERARQDLVEKLKQVNLFLQAQAASQESLEQLRENSNASVRSQMELRIKDLESQLYRMKAQEDFDKIELEK 1140
Cdd:pfam02463 865 KEELLQELLLKEEELEEQKLKDELESKEEKEKEEKKELEEESQKLNLLEEKENEIEERIKEEAEILLKYEEEPEELLLEE 944
|
810 820 830
....*....|....*....|....*....|....*....
gi 1907172253 1141 YKQLYQEEFRARKSLSSKLNKTSEKLEEASSKLLLEEQQ 1179
Cdd:pfam02463 945 ADEKEKEENNKEEEEERNKRLLLAKEELGKVNLMAIEEF 983
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
266-859 |
2.95e-06 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 51.86 E-value: 2.95e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 266 AAVDNLDDFTESSETASEDHELQGPDSESILCAIEHLRleckdtASLLKIRDAVYSYKRLIELKRSHCELLTGKLKRMEN 345
Cdd:COG1196 229 LLLLKLRELEAELEELEAELEELEAELEELEAELAELE------AELEELRLELEELELELEEAQAEEYELLAELARLEQ 302
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 346 KYKGLQKEMSETEEVKSRLEHEKVGWEQELCRLRFALKQEEEKRRSADQLSEKTSEQLRRKGEQCQSEVEARQQLEASLR 425
Cdd:COG1196 303 DIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELE 382
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 426 TLEMELKTVKSHLNQVLEERNETQRQLSREQNARmlqdgilASHLCKQKEIEMTQKKMTSEVSVSHEKEKDLLHKNQRLQ 505
Cdd:COG1196 383 ELAEELLEALRAAAELAAQLEELEEAEEALLERL-------ERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELE 455
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 506 DEVAVLRLEMDTIKSHNQEKEKRYLEDIKIANEKN---DNLQRMVKLNEEtftktiFQYTGQLNSLKAENTMLSSKLDNE 582
Cdd:COG1196 456 EEEEALLELLAELLEEAALLEAALAELLEELAEAAarlLLLLEAEADYEG------FLEGVKAALLLAGLRGLAGAVAVL 529
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 583 KQNKERLETDVESFRSRLASALHDHAEIQTAKRDLEIAFQRARDEWFRVKDKMNfdmsNLRDNNEVLSQQLSKTERKLNS 662
Cdd:COG1196 530 IGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIR----ARAALAAALARGAIGAAVDLVA 605
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 663 LEIEFHHTKDELREKTLALK-HAQRDLSQTQCQMKEVEHMFQDEQGKVSKFMGKQESIEERLAQLQSENTLLRQQLDDAA 741
Cdd:COG1196 606 SDLREADARYYVLGDTLLGRtLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELA 685
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 742 NKAEskdktivniqdqfqdvltrfQAESQRHSLRLEDRNQELvsecsHLRERLCQYENEKAEREVVVRQLQQELADTLKK 821
Cdd:COG1196 686 ERLA--------------------EEELELEEALLAEEEEER-----ELAEAEEERLEEELEEEALEEQLEAEREELLEE 740
|
570 580 590
....*....|....*....|....*....|....*...
gi 1907172253 822 QSMSEASLEVSSRYRSNLEEEARDLKKKLGQLRSQLQE 859
Cdd:COG1196 741 LLEEEELLEEEALEELPEPPDLEELERELERLEREIEA 778
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
371-1179 |
3.08e-06 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 51.97 E-value: 3.08e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 371 WEQELCRLRFALKQEEEKRRSADQLSEKTSEQLRRKGEQCQSEVEARQQLEASLRTLEMELKTVKSHLNQVLEERNETQR 450
Cdd:TIGR00606 243 YENELDPLKNRLKEIEHNLSKIMKLDNEIKALKSRKKQMEKDNSELELKMEKVFQGTDEQLNDLYHNHQRTVREKERELV 322
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 451 QLSREQNaRMLQDGILASHLCKQKEIEMTQKKMTSEVSVSHEKEKDLLHKNQRLQDEVAVLRLEMDT---IKSHNQEKEK 527
Cdd:TIGR00606 323 DCQRELE-KLNKERRLLNQEKTELLVEQGRLQLQADRHQEHIRARDSLIQSLATRLELDGFERGPFSerqIKNFHTLVIE 401
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 528 RYLEDIKIANEKNDNLQRMVKLNEETFTKTIFQYTGQLNSLKAENTMLSSKLDN-----------EKQNKERLETDVESF 596
Cdd:TIGR00606 402 RQEDEAKTAAQLCADLQSKERLKQEQADEIRDEKKGLGRTIELKKEILEKKQEElkfvikelqqlEGSSDRILELDQELR 481
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 597 RSRLASALHDHAEIQTAKRDLEIAFQRARDEWFRVKDKMNFDMSNLRDNNEVLSQQLSKTERK----------------- 659
Cdd:TIGR00606 482 KAERELSKAEKNSLTETLKKEVKSLQNEKADLDRKLRKLDQEMEQLNHHTTTRTQMEMLTKDKmdkdeqirkiksrhsde 561
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 660 LNSLEIEFHHTK---DELREKTLALKHAQRDLSQTQCQMKEVEHMFQDEQGKVSKFMGKQESIEERL------AQLQSEN 730
Cdd:TIGR00606 562 LTSLLGYFPNKKqleDWLHSKSKEINQTRDRLAKLNKELASLEQNKNHINNELESKEEQLSSYEDKLfdvcgsQDEESDL 641
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 731 TLLRQQLDDAAnKAESKDKTIVNIQDQFQDVLTRFQAESQRHSLRLEDRNQELVSECSHLRERLCQYENEKAEREVVVRQ 810
Cdd:TIGR00606 642 ERLKEEIEKSS-KQRAMLAGATAVYSQFITQLTDENQSCCPVCQRVFQTEAELQEFISDLQSKLRLAPDKLKSTESELKK 720
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 811 LQQELADTLKKQSMSEASLEVSSRYRSNLEEEARDLKKKLGQLRSQLQEARDQHREAVHHAEKMEDHL------QKLELE 884
Cdd:TIGR00606 721 KEKRRDEMLGLAPGRQSIIDLKEKEIPELRNKLQKVNRDIQRLKNDIEEQETLLGTIMPEEESAKVCLtdvtimERFQME 800
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 885 KSKFEITIKKQSEEIDQLQENLSRVNLSEEDKEKLQKLTELKESLEctvdqeqkrssALEKELAEFKEVLKMTKKELNEY 964
Cdd:TIGR00606 801 LKDVERKIAQQAAKLQGSDLDRTVQQVNQEKQEKQHELDTVVSKIE-----------LNRKLIQDQQEQIQHLKSKTNEL 869
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 965 ENRELNLRQDIKNNHlEMDIPVSTLIKKIDDLTAKLETASSKCLHLgkKNQLLQQELLLMRTIQKKcgklEKNKKQLEQE 1044
Cdd:TIGR00606 870 KSEKLQIGTNLQRRQ-QFEEQLVELSTEVQSLIREIKDAKEQDSPL--ETFLEKDQQEKEELISSK----ETSNKKAQDK 942
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 1045 VVNLRSHMEKNMVEHSQAQQYAREVEERARQDLVEKLKQVNLFLQAQAASQESLEQLRENSNASVRSQmELRIKDLESQL 1124
Cdd:TIGR00606 943 VNDIKEKVKNIHGYMKDIENKIQDGKDDYLKQKETELNTVNAQLEECEKHQEKINEDMRLMRQDIDTQ-KIQERWLQDNL 1021
|
810 820 830 840 850
....*....|....*....|....*....|....*....|....*....|....*...
gi 1907172253 1125 YRMKAQEDFDKIELEK---YKQLYQEEFRARKSLSSKLNKTSEKLEEASSKLLLEEQQ 1179
Cdd:TIGR00606 1022 TLRKRENELKEVEEELkqhLKEMGQMQVLQMKQEHQKLEENIDLIKRNHVLALGRQKG 1079
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
382-1168 |
3.94e-06 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 51.59 E-value: 3.94e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 382 LKQEEEKRRSADQLSEKTSEQLRRKGEQCQSEVEARQQLEASLRtlemelKTVKSHLNQvLEERNETQRQLSREQNARML 461
Cdd:TIGR00606 194 VRQTQGQKVQEHQMELKYLKQYKEKACEIRDQITSKEAQLESSR------EIVKSYENE-LDPLKNRLKEIEHNLSKIMK 266
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 462 QDGILASHLCKQKEIEMTQK----KMTSEVSVSHEKEKDLLHKNQRLQDEVAVLRLEMD-TIKSHNQEKEKRYLEDIKIA 536
Cdd:TIGR00606 267 LDNEIKALKSRKKQMEKDNSelelKMEKVFQGTDEQLNDLYHNHQRTVREKERELVDCQrELEKLNKERRLLNQEKTELL 346
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 537 NEkndnlQRMVKLNEETFTKTIFQYTG--QLNSLKAENTMLSSKLDNEKQNKERLETDVESFRSRLASALHDHAEIQTAK 614
Cdd:TIGR00606 347 VE-----QGRLQLQADRHQEHIRARDSliQSLATRLELDGFERGPFSERQIKNFHTLVIERQEDEAKTAAQLCADLQSKE 421
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 615 RdleiAFQRARDEwfrVKDKMNFDMSNLRDNNEVLSQQLSKTERKLNSLEiEFHHTKDELREKTLALKHAQRDLSQ---- 690
Cdd:TIGR00606 422 R----LKQEQADE---IRDEKKGLGRTIELKKEILEKKQEELKFVIKELQ-QLEGSSDRILELDQELRKAERELSKaekn 493
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 691 --TQCQMKEVEHMfQDEQGKVSKfmgKQESIEERLAQLQSENTLLRQQLDDAANKAEsKDKTIVNIQDQFQDVLTRF--- 765
Cdd:TIGR00606 494 slTETLKKEVKSL-QNEKADLDR---KLRKLDQEMEQLNHHTTTRTQMEMLTKDKMD-KDEQIRKIKSRHSDELTSLlgy 568
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 766 -----QAESQRHSLR-----LEDRNQELVSECSHLRERLCQYENEKAER--------------------EVVVRQLQQEL 815
Cdd:TIGR00606 569 fpnkkQLEDWLHSKSkeinqTRDRLAKLNKELASLEQNKNHINNELESKeeqlssyedklfdvcgsqdeESDLERLKEEI 648
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 816 ADTLKKQSMSEASLEVSSRYRSNLEEEARD---LKKKLGQLRSQLQEA----RDQHREAVHHAEKMEDHLQKLELEKSKF 888
Cdd:TIGR00606 649 EKSSKQRAMLAGATAVYSQFITQLTDENQSccpVCQRVFQTEAELQEFisdlQSKLRLAPDKLKSTESELKKKEKRRDEM 728
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 889 EITIKKQSEEIDQLQENLSRVnlseedKEKLQKLTELKESLECTVDQEQKRSSALEKELAEFKEVLK----MTKKELNEY 964
Cdd:TIGR00606 729 LGLAPGRQSIIDLKEKEIPEL------RNKLQKVNRDIQRLKNDIEEQETLLGTIMPEEESAKVCLTdvtiMERFQMELK 802
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 965 ENRELNLRQDIKNNHLEMDIPVSTLIKKIDDLTAKLETASSKCLHLGKknqLLQQELLLMRTIQKKCGKLEKNKKQLEQE 1044
Cdd:TIGR00606 803 DVERKIAQQAAKLQGSDLDRTVQQVNQEKQEKQHELDTVVSKIELNRK---LIQDQQEQIQHLKSKTNELKSEKLQIGTN 879
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 1045 VVNLRSHMEKNMVEHSQAQQYAREVEERARQDLVEKLkqvnlFLQAQAASQESLEQLRENSNASVRSQMELRIKDLESQL 1124
Cdd:TIGR00606 880 LQRRQQFEEQLVELSTEVQSLIREIKDAKEQDSPLET-----FLEKDQQEKEELISSKETSNKKAQDKVNDIKEKVKNIH 954
|
810 820 830 840
....*....|....*....|....*....|....*....|....
gi 1907172253 1125 YRMKAQEDFDKIELEKYKQLYQEEFRARKSLSSKLNKTSEKLEE 1168
Cdd:TIGR00606 955 GYMKDIENKIQDGKDDYLKQKETELNTVNAQLEECEKHQEKINE 998
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
339-1151 |
4.22e-06 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 51.51 E-value: 4.22e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 339 KLKRMENKYKGLQKEMSETEEVKSRL--EHEKVGWEQELCRLRFALKQEEEKRRSADQLSEKTSEQLRRKGEQCQSEVEA 416
Cdd:pfam02463 201 KLKEQAKKALEYYQLKEKLELEEEYLlyLDYLKLNEERIDLLQELLRDEQEEIESSKQEIEKEEEKLAQVLKENKEEEKE 280
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 417 RQQLEASLRTLEMELKTVKSHLNQVLEERNETQRQLSREQNarmlQDGILASHLCKQKEIEMTQKKMTSEVSVSHEKEKD 496
Cdd:pfam02463 281 KKLQEEELKLLAKEEEELKSELLKLERRKVDDEEKLKESEK----EKKKAEKELKKEKEEIEELEKELKELEIKREAEEE 356
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 497 LLHKNQRLQDEVAVLRLEMDTIKSHNQEKEKRYLEDIKIANEKNDNLQRMVKLNEETFTKTIFQYTGQLNSLKAENTMLS 576
Cdd:pfam02463 357 EEEELEKLQEKLEQLEEELLAKKKLESERLSSAAKLKEEELELKSEEEKEAQLLLELARQLEDLLKEEKKEELEILEEEE 436
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 577 SKLDNEKQNKERLETDVESFRSRLASALHDHAEIQTAKRDLEIAFQRARDEWFRVKDKMNFDMSNLRDNNEVLSQQLSKT 656
Cdd:pfam02463 437 ESIELKQGKLTEEKEELEKQELKLLKDELELKKSEDLLKETQLVKLQEQLELLLSRQKLEERSQKESKARSGLKVLLALI 516
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 657 ERKLNSLEIEFHHTKDELREKTLALKHA-----QRDLSQTQCQMKEVEHMFQ------DEQGKVSKFMGKQESIEERLAQ 725
Cdd:pfam02463 517 KDGVGGRIISAHGRLGDLGVAVENYKVAistavIVEVSATADEVEERQKLVRaltelpLGARKLRLLIPKLKLPLKSIAV 596
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 726 LQSENTLLRQQLDDAANKAESKDKTIVNIQDQFQDVLtrfQAESQRHSLRLEDRNQELVSecshlrerLCQYENEKAERE 805
Cdd:pfam02463 597 LEIDPILNLAQLDKATLEADEDDKRAKVVEGILKDTE---LTKLKESAKAKESGLRKGVS--------LEEGLAEKSEVK 665
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 806 VVVRQLQQELADTLKKQSMSEASLEVSSRYRSNLEEEARDLKKKLGQLRSQLQEARDQHREAVHHAEKMEDHLQKLELEK 885
Cdd:pfam02463 666 ASLSELTKELLEIQELQEKAESELAKEEILRRQLEIKKKEQREKEELKKLKLEAEELLADRVQEAQDKINEELKLLKQKI 745
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 886 SKFEITIKKQSEEIDQLQENLSRVnLSEEDKEKLQKLTELKESLEctvDQEQKRSSALEKELAEFKEVLKMTKKELNEYE 965
Cdd:pfam02463 746 DEEEEEEEKSRLKKEEKEEEKSEL-SLKEKELAEEREKTEKLKVE---EEKEEKLKAQEEELRALEEELKEEAELLEEEQ 821
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 966 NRELNL--RQDIKNNHLEMDIPVSTLIKKIDDLTAKLETASSKCLHLGKKNQLLQQELLLMRTIQKKCGKLEKNKKQLEQ 1043
Cdd:pfam02463 822 LLIEQEekIKEEELEELALELKEEQKLEKLAEEELERLEEEITKEELLQELLLKEEELEEQKLKDELESKEEKEKEEKKE 901
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 1044 EVVNLRSHMEKNMVEHSQAQQYAREVEERaRQDLVEKLKQVNLFLQAQAASQESLEQLRENSNASVRSQMELRIKDLES- 1122
Cdd:pfam02463 902 LEEESQKLNLLEEKENEIEERIKEEAEIL-LKYEEEPEELLLEEADEKEKEENNKEEEEERNKRLLLAKEELGKVNLMAi 980
|
810 820 830
....*....|....*....|....*....|
gi 1907172253 1123 -QLYRMKAQEDFDKIELEKYKQLYQEEFRA 1151
Cdd:pfam02463 981 eEFEEKEERYNKDELEKERLEEEKKKLIRA 1010
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
584-971 |
4.79e-06 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 51.22 E-value: 4.79e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 584 QNKERLETDVESFRSRLASALHDHAEIQTAKRDLEIAFQRARDEWFRVkDKMNFDMSNLRDNNEVLSQQLSKTERKLNSL 663
Cdd:PRK03918 186 KRTENIEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKEL-EELKEEIEELEKELESLEGSKRKLEEKIREL 264
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 664 EIEFHHTKDELREktlaLKHAQRDLSQtqcqMKEVEHMFQDEQGKVSKFMGKQESIEERLAQLQSENTLLRQQLDDAank 743
Cdd:PRK03918 265 EERIEELKKEIEE----LEEKVKELKE----LKEKAEEYIKLSEFYEEYLDELREIEKRLSRLEEEINGIEERIKEL--- 333
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 744 aESKDKTIVNIQDQFQDVLTRFQAESQRHslRLEDRNQELVSECSHLRERLCQYENEKAEREVvvrqlqqELADTLKKQS 823
Cdd:PRK03918 334 -EEKEERLEELKKKLKELEKRLEELEERH--ELYEEAKAKKEELERLKKRLTGLTPEKLEKEL-------EELEKAKEEI 403
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 824 MSEASlEVSSRyRSNLEEEARDLKKKLGQLRSQL-------QEARDQHRE---AVHHAE---------KMEDHLQKLELE 884
Cdd:PRK03918 404 EEEIS-KITAR-IGELKKEIKELKKAIEELKKAKgkcpvcgRELTEEHRKellEEYTAElkriekelkEIEEKERKLRKE 481
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 885 KSKFEITIKKQS---------EEIDQLQENLSRVNLS--EEDKEKLQKLTELKESLEC---TVDQEQKRSSALEKELAEF 950
Cdd:PRK03918 482 LRELEKVLKKESeliklkelaEQLKELEEKLKKYNLEelEKKAEEYEKLKEKLIKLKGeikSLKKELEKLEELKKKLAEL 561
|
410 420
....*....|....*....|.
gi 1907172253 951 KEVLKMTKKELNEYENRELNL 971
Cdd:PRK03918 562 EKKLDELEEELAELLKELEEL 582
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
750-971 |
8.49e-06 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 50.30 E-value: 8.49e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 750 TIVNIQDQFQDvLTRFQ-----AESQRHSLR-LEDRNQELVsecsHLRERLCQYENEKAEREVVVRQLQQELADtlKKQS 823
Cdd:COG4913 226 AADALVEHFDD-LERAHealedAREQIELLEpIRELAERYA----AARERLAELEYLRAALRLWFAQRRLELLE--AELE 298
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 824 MSEASLEvssryrsNLEEEARDLKKKLGQLRSQLQEARDQHREAVHhaekmeDHLQKLELEKSKFEITIKKQSEEIDQLQ 903
Cdd:COG4913 299 ELRAELA-------RLEAELERLEARLDALREELDELEAQIRGNGG------DRLEQLEREIERLERELEERERRRARLE 365
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1907172253 904 ENLSRVNLSEED-----KEKLQKLTELKESLECTVDQEQKRSSALEKELAEFKEVLKMTKKELNEYENRELNL 971
Cdd:COG4913 366 ALLAALGLPLPAsaeefAALRAEAAALLEALEEELEALEEALAEAEAALRDLRRELRELEAEIASLERRKSNI 438
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
518-1168 |
1.14e-05 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 50.02 E-value: 1.14e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 518 IKSHNQEKEKRYLEDIKIANEKNDNLQRMVKLNEETFTK---TIFQYTGQLNSLKAENTMLSSKLDNEKQNKERLETDVe 594
Cdd:TIGR04523 27 IANKQDTEEKQLEKKLKTIKNELKNKEKELKNLDKNLNKdeeKINNSNNKIKILEQQIKDLNDKLKKNKDKINKLNSDL- 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 595 sfrSRLASALHDHAEIQTAKRDLEIAFQRARDEWFRVKDKMNFDMSNLRDNNEVLSQQLSKTERKLNSLEIEFHHTKDEL 674
Cdd:TIGR04523 106 ---SKINSEIKNDKEQKNKLEVELNKLEKQKKENKKNIDKFLTEIKKKEKELEKLNNKYNDLKKQKEELENELNLLEKEK 182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 675 REKtlalkhaQRDLSQTQCQMKEVEHMFQDEQGKVSKfmgkQESIEERLAQLQSENTLLRQQLDDAANKAESKDKTIVNI 754
Cdd:TIGR04523 183 LNI-------QKNIDKIKNKLLKLELLLSNLKKKIQK----NKSLESQISELKKQNNQLKDNIEKKQQEINEKTTEISNT 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 755 QDQFQDVLTrfqaESQRHSLRLEDRNQELVSECSHLRERLCQYENEKAEREVVVRQLQQELADTLKkqsmseaslevssr 834
Cdd:TIGR04523 252 QTQLNQLKD----EQNKIKKQLSEKQKELEQNNKKIKELEKQLNQLKSEISDLNNQKEQDWNKELK-------------- 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 835 yrsnleEEARDLKKKLGQLRSQLQEARDQHREAVHHAEKMEDHLQKLELEKSKFEITIKKQSEEIDQLQENlsrvnlSEE 914
Cdd:TIGR04523 314 ------SELKNQEKKLEEIQNQISQNNKIISQLNEQISQLKKELTNSESENSEKQRELEEKQNEIEKLKKE------NQS 381
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 915 DKEKLQKLTELKESLECTVDQEQKRSSALEKELAEFKEVLKMTKKELNEYENRELNLRQDIKNnhLEMDIPV-STLIKKI 993
Cdd:TIGR04523 382 YKQEIKNLESQINDLESKIQNQEKLNQQKDEQIKKLQQEKELLEKEIERLKETIIKNNSEIKD--LTNQDSVkELIIKNL 459
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 994 DDLTAKLETASSKCLHLGKKNQLlqqelllmrtiqkkcgKLEKNKKQLEQEVVNLRSHMEKNmvehsqaqqyareveera 1073
Cdd:TIGR04523 460 DNTRESLETQLKVLSRSINKIKQ----------------NLEQKQKELKSKEKELKKLNEEK------------------ 505
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 1074 rQDLVEKLKQVNlflQAQAASQESLEQLRensnaSVRSQMELRIKDLESQLYRMKaqEDFDKIELEKYKQLYQEEFRARK 1153
Cdd:TIGR04523 506 -KELEEKVKDLT---KKISSLKEKIEKLE-----SEKKEKESKISDLEDELNKDD--FELKKENLEKEIDEKNKEIEELK 574
|
650
....*....|....*
gi 1907172253 1154 SLSSKLNKTSEKLEE 1168
Cdd:TIGR04523 575 QTQKSLKKKQEEKQE 589
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
323-927 |
1.20e-05 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 49.68 E-value: 1.20e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 323 KRLIELKRSHCELLTGKLKRMENKYKGLQKEMSETEEVKSRLEHEKVGWEQELCRLRFALKQEEEKRRSADQLSEKTSEQ 402
Cdd:PRK03918 171 IKEIKRRIERLEKFIKRTENIEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKELEELKEEIEELEKELESL 250
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 403 LRRKGEqcqsevearqqLEASLRTLEMELKTVKSHLnQVLEERNETQRQLSREQNARMLQDGILASHLCKQKEIEMTQKK 482
Cdd:PRK03918 251 EGSKRK-----------LEEKIRELEERIEELKKEI-EELEEKVKELKELKEKAEEYIKLSEFYEEYLDELREIEKRLSR 318
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 483 MTSEVSVSHEKEKDLLHKNQRLQdevavlrlEMDTIKSHNQEKEKRYLEDIKIANEKNDNLQRMVKLNEETFTKTIFQYT 562
Cdd:PRK03918 319 LEEEINGIEERIKELEEKEERLE--------ELKKKLKELEKRLEELEERHELYEEAKAKKEELERLKKRLTGLTPEKLE 390
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 563 GQLNSLKAENTMLSSKLDNEKQNKERLETDVESFRSRLASALHDHAEIQTAKRDLEiafqraRDEWFRVKDKMNFDMSNL 642
Cdd:PRK03918 391 KELEELEKAKEEIEEEISKITARIGELKKEIKELKKAIEELKKAKGKCPVCGRELT------EEHRKELLEEYTAELKRI 464
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 643 RDNNEVLSQQLSKTERKLNSLEIEFHHTKDELREKTLA--LKHAQRDLSQTQCQ-MKEVEHMFQDEQGKVSKFMGKQESI 719
Cdd:PRK03918 465 EKELKEIEEKERKLRKELRELEKVLKKESELIKLKELAeqLKELEEKLKKYNLEeLEKKAEEYEKLKEKLIKLKGEIKSL 544
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 720 E---ERLAQLQSENTLLRQQLDDAANKAESKDKTIVNIQ-DQFQDVLTRFQAESQRHSLRLEDRNQElvSECSHLRERLc 795
Cdd:PRK03918 545 KkelEKLEELKKKLAELEKKLDELEEELAELLKELEELGfESVEELEERLKELEPFYNEYLELKDAE--KELEREEKEL- 621
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 796 qyenEKAEREVVvrQLQQELADTLKKQSMSEASLEVSSRYRSnlEEEARDLKKKLGQLRSQLQEARDQHREAVHHAEKME 875
Cdd:PRK03918 622 ----KKLEEELD--KAFEELAETEKRLEELRKELEELEKKYS--EEEYEELREEYLELSRELAGLRAELEELEKRREEIK 693
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|...
gi 1907172253 876 DHLQKLELEKSKfeitIKKQSEEIDQLQENLSRVnlsEEDKEKLQKL-TELKE 927
Cdd:PRK03918 694 KTLEKLKEELEE----REKAKKELEKLEKALERV---EELREKVKKYkALLKE 739
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
617-1003 |
1.79e-05 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 49.00 E-value: 1.79e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 617 LEIAFQRARDEWFRVKDKmnfdmsnlrdNNEVLSQQLSKTERKLNSLEIEfhhtKDELREKTLALKHAQRDLSQTQCQMK 696
Cdd:COG4717 47 LLERLEKEADELFKPQGR----------KPELNLKELKELEEELKEAEEK----EEEYAELQEELEELEEELEELEAELE 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 697 EVEHMFQ--DEQGKVSKFMGKQESIEERLAQLQSENTLLRQQLD---DAANKAESKDKTIVNIQDQFQDVLTRFQAESQR 771
Cdd:COG4717 113 ELREELEklEKLLQLLPLYQELEALEAELAELPERLEELEERLEelrELEEELEELEAELAELQEELEELLEQLSLATEE 192
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 772 HSLRLEDRNQELVSECSHLRERLCQYENEKAEREVVVRQLQQELADTLKKQSMSEA------------------------ 827
Cdd:COG4717 193 ELQDLAEELEELQQRLAELEEELEEAQEELEELEEELEQLENELEAAALEERLKEArlllliaaallallglggsllsli 272
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 828 --------------SLEVSSRYRSNLEEEARDLKKKLGQLRSQLQEAR--------------------------DQHREA 867
Cdd:COG4717 273 ltiagvlflvlgllALLFLLLAREKASLGKEAEELQALPALEELEEEEleellaalglppdlspeellelldriEELQEL 352
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 868 VHHAEKMEDHLQKLELEKSKFEITIKKQSEEIDQLQENLSRVNLSEEDKEKLQKLTELKESLECTVDQEQKRSS--ALEK 945
Cdd:COG4717 353 LREAEELEEELQLEELEQEIAALLAEAGVEDEEELRAALEQAEEYQELKEELEELEEQLEELLGELEELLEALDeeELEE 432
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 1907172253 946 ELAEFKEVLKMTKKELNEYENRELNLRQDIKnnHLEMDIPVSTLIKKIDDLTAKLETA 1003
Cdd:COG4717 433 ELEELEEELEELEEELEELREELAELEAELE--QLEEDGELAELLQELEELKAELREL 488
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
347-980 |
4.50e-05 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 47.99 E-value: 4.50e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 347 YKGLQKEMSETEEVKSRLEhekvgweqELCRLRFALKQEEEKRRSADQLSEK-TSEQLRRKGEQCQSEVEarqQLEASLR 425
Cdd:COG4913 237 LERAHEALEDAREQIELLE--------PIRELAERYAAARERLAELEYLRAAlRLWFAQRRLELLEAELE---ELRAELA 305
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 426 TLEMELKTVKSHLNQVLEERNETQRQLSReqnarmlQDGILASHLckQKEIEMTQkkmtsevsvshEKEKDLLHKNQRLQ 505
Cdd:COG4913 306 RLEAELERLEARLDALREELDELEAQIRG-------NGGDRLEQL--EREIERLE-----------RELEERERRRARLE 365
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 506 DEVAVLRLEMDTIkshnqekEKRYLEDIKIANEKNDNLQRMVKLNEETFTKTIfqytGQLNSLKAENTMLSSKLDNEKQN 585
Cdd:COG4913 366 ALLAALGLPLPAS-------AEEFAALRAEAAALLEALEEELEALEEALAEAE----AALRDLRRELRELEAEIASLERR 434
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 586 KERLETDVESFRSRLASAL-----------------HDHAEIQTA--------KRDL---EIAFQRARdEWF-RVKDKMN 636
Cdd:COG4913 435 KSNIPARLLALRDALAEALgldeaelpfvgelievrPEEERWRGAiervlggfALTLlvpPEHYAAAL-RWVnRLHLRGR 513
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 637 FDMSNLRDNNEvlSQQLSKTE-----RKLNSLEIEFHHT-KDELREKTL--------ALKHAQRDLSQTqCQMKEVEHMF 702
Cdd:COG4913 514 LVYERVRTGLP--DPERPRLDpdslaGKLDFKPHPFRAWlEAELGRRFDyvcvdspeELRRHPRAITRA-GQVKGNGTRH 590
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 703 Q-DEQGKVSK--FMGkqESIEERLAQLQSENTLLRQQLDDAANKAESkdktivnIQDQFQDVLTRFQAESQRHSLRLEDR 779
Cdd:COG4913 591 EkDDRRRIRSryVLG--FDNRAKLAALEAELAELEEELAEAEERLEA-------LEAELDALQERREALQRLAEYSWDEI 661
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 780 N-QELVSECSHLRERLCQYENEKAErevvVRQLQQELaDTLKKQsmseaslevssryRSNLEEEARDLKKKLGQLRSQLQ 858
Cdd:COG4913 662 DvASAEREIAELEAELERLDASSDD----LAALEEQL-EELEAE-------------LEELEEELDELKGEIGRLEKELE 723
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 859 EARDQHREA---VHHAEKMEDHLQKLELEKsKFEITIKKQSEeiDQLQENLSrvnlseedkEKLQKLTELKESLEctvdq 935
Cdd:COG4913 724 QAEEELDELqdrLEAAEDLARLELRALLEE-RFAAALGDAVE--RELRENLE---------ERIDALRARLNRAE----- 786
|
650 660 670 680
....*....|....*....|....*....|....*....|....*...
gi 1907172253 936 eqkrsSALEKELAEFKEVLKMTKKELN---EYENRELNLRQDIKNNHL 980
Cdd:COG4913 787 -----EELERAMRAFNREWPAETADLDadlESLPEYLALLDRLEEDGL 829
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
649-867 |
4.56e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 47.45 E-value: 4.56e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 649 LSQQLSKTERKLNSLEIEFHHTKDELREKTLALKHAQRDLSQTQCQMKEVEhmfqdeqGKVSKFMGKQESIEERLAQLQS 728
Cdd:COG4942 32 LQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALE-------AELAELEKEIAELRAELEAQKE 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 729 EntlLRQQLDDAANKAESKDKTIVNIQDQFQDVLTRFQAeSQRHSLRLEDRNQELVSECSHLRERLCQYENEKAEREVVV 808
Cdd:COG4942 105 E---LAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQY-LKYLAPARREQAEELRADLAELAALRAELEAERAELEALL 180
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 1907172253 809 RQLQQELADTLKKQSMSEASLEVSSRYRSNLEEEARDLKKKLGQLRSQLQEARDQHREA 867
Cdd:COG4942 181 AELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAA 239
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
338-1070 |
5.06e-05 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 47.83 E-value: 5.06e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 338 GKLKRMENKYKGLQKEMSETEEVKSRLEH----EKVGWEQELCRLRFALKQEEEKRRSADQLSEKTSE-QLRRKGEQCQS 412
Cdd:PTZ00121 1098 GKAEEAKKTETGKAEEARKAEEAKKKAEDarkaEEARKAEDARKAEEARKAEDAKRVEIARKAEDARKaEEARKAEDAKK 1177
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 413 EVEARQQLEasLRTLEmELKTVKSHLNQVLEERNETQRqlsREQNARMLQDGILASHLCKQKEIemtqkKMTSEVSVSHE 492
Cdd:PTZ00121 1178 AEAARKAEE--VRKAE-ELRKAEDARKAEAARKAEEER---KAEEARKAEDAKKAEAVKKAEEA-----KKDAEEAKKAE 1246
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 493 KEKDLLHKNQRLQDEVAVLRLEMDTIKShnqeKEKRYLEDIKIANE--KNDNLQRMVKLNEETFTKTIFQYTGQLNSLKA 570
Cdd:PTZ00121 1247 EERNNEEIRKFEEARMAHFARRQAAIKA----EEARKADELKKAEEkkKADEAKKAEEKKKADEAKKKAEEAKKADEAKK 1322
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 571 ENTMLSSKLDNEKQNKERLETDVESFRsrlasalhdhAEIQTAKRDLEIAFQRAR-DEWFRVKDKMNFDMSNLRDNNEVL 649
Cdd:PTZ00121 1323 KAEEAKKKADAAKKKAEEAKKAAEAAK----------AEAEAAADEAEAAEEKAEaAEKKKEEAKKKADAAKKKAEEKKK 1392
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 650 SQQLSKTERklnsleiEFHHTKDELREKTLALKHAQrDLSQTQCQMKEVEHMFQDEQGKVSKFMGKQESIEERLAQLQSE 729
Cdd:PTZ00121 1393 ADEAKKKAE-------EDKKKADELKKAAAAKKKAD-EAKKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKAEEAKK 1464
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 730 NTLLRQQLDDAANKAESKDKTivniqdqfqDVLTRFQAESQRHS--LRLEDRNQELVSECSHLRERLCQYENEKAEREVV 807
Cdd:PTZ00121 1465 KAEEAKKADEAKKKAEEAKKA---------DEAKKKAEEAKKKAdeAKKAAEAKKKADEAKKAEEAKKADEAKKAEEAKK 1535
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 808 VRQLQQ----ELADTLKKQSMSEASLEVSSRYRSNLEEEARDLKKKLGQLRSQLQEARDQHREAVHHAEKMEDHLQKLEL 883
Cdd:PTZ00121 1536 ADEAKKaeekKKADELKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKA 1615
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 884 EKSKFEITIKKQSEEIDQLQENLSRVnlSEEDKEKLQKLTELKESLECTVDQEQKRSSALEKELAEFK--EVLKMTKKEL 961
Cdd:PTZ00121 1616 EEAKIKAEELKKAEEEKKKVEQLKKK--EAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKkaEEDEKKAAEA 1693
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 962 NEYENRELNLRQDIKNNHLEMdipvstlIKKIDDLTAKLETASSKCLHLGKKNQLLQQELLLMRTIQKKCGKLEKNKKQL 1041
Cdd:PTZ00121 1694 LKKEAEEAKKAEELKKKEAEE-------KKKAEELKKAEEENKIKAEEAKKEAEEDKKKAEEAKKDEEEKKKIAHLKKEE 1766
|
730 740
....*....|....*....|....*....
gi 1907172253 1042 EQEVVNLRSHMEKNMVEHSQAQQYAREVE 1070
Cdd:PTZ00121 1767 EKKAEEIRKEKEAVIEEELDEEDEKRRME 1795
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
517-1183 |
6.06e-05 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 47.41 E-value: 6.06e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 517 TIKSHNQEKEKRYLEDIKIANEKNDNLQRMVKLNEETFTKTIFQYTGQLNSLKAENT------MLSSKLDNEKQNKERLE 590
Cdd:pfam05483 96 SIEAELKQKENKLQENRKIIEAQRKAIQELQFENEKVSLKLEEEIQENKDLIKENNAtrhlcnLLKETCARSAEKTKKYE 175
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 591 TDVESFRSRLASALHDHAEIQTAKRDLEIAFQRARDEwfrVKDKMNFDMSNLRDNNEVLSQQLSKTERKLNSLEIEFHHT 670
Cdd:pfam05483 176 YEREETRQVYMDLNNNIEKMILAFEELRVQAENARLE---MHFKLKEDHEKIQHLEEEYKKEINDKEKQVSLLLIQITEK 252
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 671 KDELREKTLALKHAQRDLSQTQCQMKEVEHMFQDEQGKVSKFMGKQESIEERLAQLQSENTLLRQQLDDAAnkaeskdKT 750
Cdd:pfam05483 253 ENKMKDLTFLLEESRDKANQLEEKTKLQDENLKELIEKKDHLTKELEDIKMSLQRSMSTQKALEEDLQIAT-------KT 325
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 751 IVNIQDQFQDVLTRFQAESQRHSLRLEDRNQELVSECSHLRERLCQYENEKAEREVVVRQLQQEladtlkkqsmsEASLE 830
Cdd:pfam05483 326 ICQLTEEKEAQMEELNKAKAAHSFVVTEFEATTCSLEELLRTEQQRLEKNEDQLKIITMELQKK-----------SSELE 394
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 831 VSSRYRSNLEEEARDLKKKLG----------QLRSQLQEARDQHREAVHHAEKMEDHLQKLELEKSKFEITIKKQSEEID 900
Cdd:pfam05483 395 EMTKFKNNKEVELEELKKILAedeklldekkQFEKIAEELKGKEQELIFLLQAREKEIHDLEIQLTAIKTSEEHYLKEVE 474
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 901 QLQENLsrvnlsEEDKEKLQKLTELKESLECTVDQEQKRSSALEKELAEFKEVLKMTKKELNEYENRELNLRQDIKNNHL 980
Cdd:pfam05483 475 DLKTEL------EKEKLKNIELTAHCDKLLLENKELTQEASDMTLELKKHQEDIINCKKQEERMLKQIENLEEKEMNLRD 548
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 981 EMDIPVSTLIKKIDDLTAKL----ETASSKCLHLGKKNQLLQQELLLMRTIQKKCGKLEKNKKQLEQEVVNLRshmEKNM 1056
Cdd:pfam05483 549 ELESVREEFIQKGDEVKCKLdkseENARSIEYEVLKKEKQMKILENKCNNLKKQIENKNKNIEELHQENKALK---KKGS 625
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 1057 VEHSQAQQYAREVE------ERARQDLVEKLKQVNLFLQAQAASQESL----EQLRENSNASVRSQMELRI----KDLES 1122
Cdd:pfam05483 626 AENKQLNAYEIKVNklelelASAKQKFEEIIDNYQKEIEDKKISEEKLleevEKAKAIADEAVKLQKEIDKrcqhKIAEM 705
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1907172253 1123 QLYRMKAQEDFDKI------ELEKYKQLYQEEFRARKSLSSKLNKTSEKLEEASSKLLLEEQQNRSL 1183
Cdd:pfam05483 706 VALMEKHKHQYDKIieerdsELGLYKNKEQEQSSAKAALEIELSNIKAELLSLKKQLEIEKEEKEKL 772
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
716-973 |
8.12e-05 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 47.21 E-value: 8.12e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 716 QESIEERLAQL------QSENTLLRQQLDDAANKAESKDKTIVNIQDQFQDVL-TRFQAESQRhslRLEDRNQELVSECS 788
Cdd:PRK11281 62 QQDLEQTLALLdkidrqKEETEQLKQQLAQAPAKLRQAQAELEALKDDNDEETrETLSTLSLR---QLESRLAQTLDQLQ 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 789 HLRERLCQYEN---------EKAEREVVVRQLQ-QELADTLKKQSMSEASLEVSSRYRSNLEEEARDLK----KKLGQLR 854
Cdd:PRK11281 139 NAQNDLAEYNSqlvslqtqpERAQAALYANSQRlQQIRNLLKGGKVGGKALRPSQRVLLQAEQALLNAQndlqRKSLEGN 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 855 SQLQEARDQHREavhhaEKMEdHLQKLElekskfeitikkqsEEIDQLQENLSRVNLsEEDKEKLQKLTELKESLECTVD 934
Cdd:PRK11281 219 TQLQDLLQKQRD-----YLTA-RIQRLE--------------HQLQLLQEAINSKRL-TLSEKTVQEAQSQDEAARIQAN 277
|
250 260 270
....*....|....*....|....*....|....*....
gi 1907172253 935 QEQKRSSALEKELAEFkeVLKMTKKeLNEYENRELNLRQ 973
Cdd:PRK11281 278 PLVAQELEINLQLSQR--LLKATEK-LNTLTQQNLRVKN 313
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
344-983 |
9.13e-05 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 46.96 E-value: 9.13e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 344 ENKYKGLQKEMSETEEVKSRLEHEKVGWEQELCRLRFALKQEEEKRRSADQLSEKTSEQLRRKG--EQCQSEVEARQQLE 421
Cdd:TIGR00606 318 ERELVDCQRELEKLNKERRLLNQEKTELLVEQGRLQLQADRHQEHIRARDSLIQSLATRLELDGfeRGPFSERQIKNFHT 397
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 422 ASLRTLEMELKTVKSHLNQVLEERNETQRQLSREQNARMLQDGILASHLCKQKEIEMTQKKMTSEVSVSHEKEKDLLHKN 501
Cdd:TIGR00606 398 LVIERQEDEAKTAAQLCADLQSKERLKQEQADEIRDEKKGLGRTIELKKEILEKKQEELKFVIKELQQLEGSSDRILELD 477
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 502 QRLQDEVAVLRLEMDTIKSHNQEKEKRYLEDIK--IANEKNDNLQRMVKLNEETFTKTI-------------------FQ 560
Cdd:TIGR00606 478 QELRKAERELSKAEKNSLTETLKKEVKSLQNEKadLDRKLRKLDQEMEQLNHHTTTRTQmemltkdkmdkdeqirkikSR 557
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 561 YTGQLNSLKAE---NTMLSSKLDNEKQNKERLETDVESFRSRLASALHDHAEIQTAKRDLEIAFQRARDEWFRVKDKMNF 637
Cdd:TIGR00606 558 HSDELTSLLGYfpnKKQLEDWLHSKSKEINQTRDRLAKLNKELASLEQNKNHINNELESKEEQLSSYEDKLFDVCGSQDE 637
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 638 --DMSNLRDNNEVLSQQLSKTERKLNSLEIEFHHTKDelrEKTLALKHAQRDLsQTQcqmKEVEHMFQDEQGKVSKFMGK 715
Cdd:TIGR00606 638 esDLERLKEEIEKSSKQRAMLAGATAVYSQFITQLTD---ENQSCCPVCQRVF-QTE---AELQEFISDLQSKLRLAPDK 710
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 716 QESIEERLAQLQSENTLLRQQLDDAANKAESKDKTIVNIQDQFQDVLTRFQ--------AESQRHSLRLEDRNQELVSEC 787
Cdd:TIGR00606 711 LKSTESELKKKEKRRDEMLGLAPGRQSIIDLKEKEIPELRNKLQKVNRDIQrlkndieeQETLLGTIMPEEESAKVCLTD 790
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 788 SHLRERLcQYENEKAEREV--------------VVRQLQQELADTLKKQSMSEASLEVSSRYRSNLEEEARDLKKKLGQL 853
Cdd:TIGR00606 791 VTIMERF-QMELKDVERKIaqqaaklqgsdldrTVQQVNQEKQEKQHELDTVVSKIELNRKLIQDQQEQIQHLKSKTNEL 869
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 854 RSQlqeaRDQHREAVHHAEKMEDHLQKLELEKSKFEITIKKQSEEI--------DQLQENLSRVNLSEEDKEKLQ-KLTE 924
Cdd:TIGR00606 870 KSE----KLQIGTNLQRRQQFEEQLVELSTEVQSLIREIKDAKEQDspletfleKDQQEKEELISSKETSNKKAQdKVND 945
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1907172253 925 LKESlectVDQEQKRSSALEKELAEFKEVLKMTKK--------ELNEYENRELNLRQDIKNNHLEMD 983
Cdd:TIGR00606 946 IKEK----VKNIHGYMKDIENKIQDGKDDYLKQKEtelntvnaQLEECEKHQEKINEDMRLMRQDID 1008
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
323-552 |
9.45e-05 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 47.06 E-value: 9.45e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 323 KRLIELKRSHCELLTGKLK--RMENKYKGLQKEMSETEEVKSRLEHEKVGWEQELCRLRFALKQEEEKRRSADQLSEKTS 400
Cdd:PTZ00121 1592 ARIEEVMKLYEEEKKMKAEeaKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAE 1671
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 401 EQlRRKGEQCQSEVEARQQLEASLRTLEMELKTVKsHLNQVLEERNETQRQLSREQNARMLQdgilASHLCKQKEIEmtq 480
Cdd:PTZ00121 1672 ED-KKKAEEAKKAEEDEKKAAEALKKEAEEAKKAE-ELKKKEAEEKKKAEELKKAEEENKIK----AEEAKKEAEED--- 1742
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1907172253 481 KKMTSEVSVSHEKEKDLLHKNQRLQDEVAVLRLEMDTI--KSHNQEKEKRYLEDIKIANEKNDNLQRMVKLNEE 552
Cdd:PTZ00121 1743 KKKAEEAKKDEEEKKKIAHLKKEEEKKAEEIRKEKEAVieEELDEEDEKRRMEVDKKIKDIFDNFANIIEGGKE 1816
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
351-978 |
9.51e-05 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 47.02 E-value: 9.51e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 351 QKEMSETEEVKSRLEHEKVGWEQELCRLRFALKQEEEKRRSADQLSEK--TSEQLRRKGEQCQSEVEARQQLE---ASLR 425
Cdd:pfam05483 103 QKENKLQENRKIIEAQRKAIQELQFENEKVSLKLEEEIQENKDLIKENnaTRHLCNLLKETCARSAEKTKKYEyerEETR 182
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 426 TLEMELKTVKSHLNQVLEERNETQRQLSREQNARMLQDGILASHLCK--QKEIEMTQKKMTSEVSVSHEKE---KDLLHK 500
Cdd:pfam05483 183 QVYMDLNNNIEKMILAFEELRVQAENARLEMHFKLKEDHEKIQHLEEeyKKEINDKEKQVSLLLIQITEKEnkmKDLTFL 262
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 501 NQRLQDEVAVL----RLEMDTIKSHNQEKE--KRYLEDIKIANEKNDNLQRMVKLNEETFTKTIFQYTGQ---------- 564
Cdd:pfam05483 263 LEESRDKANQLeektKLQDENLKELIEKKDhlTKELEDIKMSLQRSMSTQKALEEDLQIATKTICQLTEEkeaqmeelnk 342
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 565 --------LNSLKAENTMLSSKLDNEKQNKERLETDVESFRSRLASALHDHAEIQTAKRDLEIAFQrardewfRVKDKMN 636
Cdd:pfam05483 343 akaahsfvVTEFEATTCSLEELLRTEQQRLEKNEDQLKIITMELQKKSSELEEMTKFKNNKEVELE-------ELKKILA 415
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 637 FDMSNLRDNNEV--LSQQLSKTERKLNSLEIEFHHTKDELREKTLALKHAQRDLSQtqcQMKEVEHMFQDEQGKVSKFMG 714
Cdd:pfam05483 416 EDEKLLDEKKQFekIAEELKGKEQELIFLLQAREKEIHDLEIQLTAIKTSEEHYLK---EVEDLKTELEKEKLKNIELTA 492
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 715 KQEsieerlaQLQSENTLLRQQLDDAANKAESKDKTIVNIQDQFQDVLTRFQA-ESQRHSLR--LEDRNQELVSECSHLR 791
Cdd:pfam05483 493 HCD-------KLLLENKELTQEASDMTLELKKHQEDIINCKKQEERMLKQIENlEEKEMNLRdeLESVREEFIQKGDEVK 565
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 792 ERLCQYENEKAEREVVVRQLQQELADTLKKQSMSEASLEVSSRYRSNLEEEARDLKK--------------KLGQLRSQL 857
Cdd:pfam05483 566 CKLDKSEENARSIEYEVLKKEKQMKILENKCNNLKKQIENKNKNIEELHQENKALKKkgsaenkqlnayeiKVNKLELEL 645
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 858 QEARDQHREAVHHAEK--------MEDHLQKLELEKSKFEITIKKQSEEIDQLQENLSR-VNLSEEDKEKLQKLTELKES 928
Cdd:pfam05483 646 ASAKQKFEEIIDNYQKeiedkkisEEKLLEEVEKAKAIADEAVKLQKEIDKRCQHKIAEmVALMEKHKHQYDKIIEERDS 725
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|....
gi 1907172253 929 -LECTVDQEQKRSS---ALEKELAEFKEVLKMTKKELNEYENRELNLRQDIKNN 978
Cdd:pfam05483 726 eLGLYKNKEQEQSSakaALEIELSNIKAELLSLKKQLEIEKEEKEKLKMEAKEN 779
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
564-881 |
9.55e-05 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 46.83 E-value: 9.55e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 564 QLNSLKAENTMLSSKLDNEKQNKERLETDVESFRSRLaSALHDHAEIQTAKRDLEIAfQRARDEWFRVKDKMNFDMSNLR 643
Cdd:COG4913 611 KLAALEAELAELEEELAEAEERLEALEAELDALQERR-EALQRLAEYSWDEIDVASA-EREIAELEAELERLDASSDDLA 688
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 644 dnneVLSQQLSKTERKLNSLEIEFHHTKDELREKTLALKHAQRDLSQTQCQMKEVEHMFQDEQgkvskfmgkQESIEERL 723
Cdd:COG4913 689 ----ALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLEL---------RALLEERF 755
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 724 AQLQSENTL------LRQQLDDAANKAESKDKTIVNIQDQFQDvltRFQAESQRHSLRLEDrNQELVSECSHL------- 790
Cdd:COG4913 756 AAALGDAVErelrenLEERIDALRARLNRAEEELERAMRAFNR---EWPAETADLDADLES-LPEYLALLDRLeedglpe 831
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 791 -RERLCQYENEKAEREVVvrQLQQELADTLK--KQSMSE--ASLEVSS---------RYRSNLEEEARDLKKKLGQLRSQ 856
Cdd:COG4913 832 yEERFKELLNENSIEFVA--DLLSKLRRAIReiKERIDPlnDSLKRIPfgpgrylrlEARPRPDPEVREFRQELRAVTSG 909
|
330 340
....*....|....*....|....*
gi 1907172253 857 LQEARDQHREavHHAEKMEDHLQKL 881
Cdd:COG4913 910 ASLFDEELSE--ARFAALKRLIERL 932
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
937-1190 |
1.04e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 46.30 E-value: 1.04e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 937 QKRSSALEKELAEFKEVLKMTKKELNEYENRELNLRQDIKNnhlemdipvstLIKKIDDLTAKLETASSKclhlgkknql 1016
Cdd:COG4942 19 ADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAA-----------LERRIAALARRIRALEQE---------- 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 1017 lqqelllMRTIQKKCGKLEKNKKQLEQEVVNLRSHMEKNMVEHSQAQQYAREVEERARQDLVEKLKQVNLFLQAQAASQE 1096
Cdd:COG4942 78 -------LAALEAELAELEKEIAELRAELEAQKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARRE 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 1097 SLEQLRENSNasvrsqmelRIKDLESQLYRMKAQEDFDKIELEKYKQLYQEEFRARKSLSSKLNKTSEKLEEASSKLLLE 1176
Cdd:COG4942 151 QAEELRADLA---------ELAALRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQE 221
|
250
....*....|....
gi 1907172253 1177 EQQNRSLLSTLSTR 1190
Cdd:COG4942 222 AEELEALIARLEAE 235
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
429-1071 |
1.59e-04 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 46.58 E-value: 1.59e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 429 MELKTVKSHLNQVLEERNETqrqLSREQNARMLQDGILASHLCKQKEIEMTQKKMTSEVSVSHEKEKDLLHKNQRLQDEV 508
Cdd:TIGR01612 715 METATVELHLSNIENKKNEL---LDIIVEIKKHIHGEINKDLNKILEDFKNKEKELSNKINDYAKEKDELNKYKSKISEI 791
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 509 AVL---RLEMDTIKS----HNQEKEKRYLEDIKIANEKNDNLQRMVKLNEETFTKTIFQYTGQLNSLKaENTMLSSKLDN 581
Cdd:TIGR01612 792 KNHyndQINIDNIKDedakQNYDKSKEYIKTISIKEDEIFKIINEMKFMKDDFLNKVDKFINFENNCK-EKIDSEHEQFA 870
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 582 EKQNKERLETDVESFRSRLASALHDHAEIQTAKRDLEIAFQ-----RARDEWFRVKDKMNFDMSNLRDNNEVLSQQLSK- 655
Cdd:TIGR01612 871 ELTNKIKAEISDDKLNDYEKKFNDSKSLINEINKSIEEEYQnintlKKVDEYIKICENTKESIEKFHNKQNILKEILNKn 950
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 656 --TERKLNSLEIEFHHTKDE-LREKTLALKHAQRDLSqtqcqmkevehmFQDEQGKVSKFMGKQESIEERLAQlQSENTL 732
Cdd:TIGR01612 951 idTIKESNLIEKSYKDKFDNtLIDKINELDKAFKDAS------------LNDYEAKNNELIKYFNDLKANLGK-NKENML 1017
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 733 LRQ------QLDDAANKAESKDKTIVNIQDQFQDVLTRFQAESQRH-SLRLEDRNQELVsecshlrerlcqyenEKAERE 805
Cdd:TIGR01612 1018 YHQfdekekATNDIEQKIEDANKNIPNIEIAIHTSIYNIIDEIEKEiGKNIELLNKEIL---------------EEAEIN 1082
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 806 VVVRQlqqELADTLKKQSMSEASLEVSSRYRSNLEEEARDLKKKLGQLRSQLQEARDQHREAVHHAEKMEDHLQKLE--- 882
Cdd:TIGR01612 1083 ITNFN---EIKEKLKHYNFDDFGKEENIKYADEINKIKDDIKNLDQKIDHHIKALEEIKKKSENYIDEIKAQINDLEdva 1159
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 883 -----------LEKSKFEITIK--KQSEEIDQLQENLSRVNLSEEDKEKLQKLTELKES---------LEcTVDQEQKRS 940
Cdd:TIGR01612 1160 dkaisnddpeeIEKKIENIVTKidKKKNIYDEIKKLLNEIAEIEKDKTSLEEVKGINLSygknlgklfLE-KIDEEKKKS 1238
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 941 SALEKELAEFKEVLKMTKKELNEYENrELNLRQDIKNNHLEMDIPVS------TLIKKIDDLTAKLEtasSKCLHLGKKN 1014
Cdd:TIGR01612 1239 EHMIKAMEAYIEDLDEIKEKSPEIEN-EMGIEMDIKAEMETFNISHDddkdhhIISKKHDENISDIR---EKSLKIIEDF 1314
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1907172253 1015 QLLQQELLLMRTIQKKCGKLEKNKKQLEQ---EVVNLRSHMEKNMVEH--SQAQQYAREVEE 1071
Cdd:TIGR01612 1315 SEESDINDIKKELQKNLLDAQKHNSDINLylnEIANIYNILKLNKIKKiiDEVKEYTKEIEE 1376
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
587-1167 |
2.16e-04 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 45.88 E-value: 2.16e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 587 ERLETDVESFRSRLASALHDHAEIQTAKRDLEIAFQRARDEWFRVKDKMNFDMSNLRDNNEVLSQQLSKTerkLNSLEIE 666
Cdd:pfam15921 81 EEYSHQVKDLQRRLNESNELHEKQKFYLRQSVIDLQTKLQEMQMERDAMADIRRRESQSQEDLRNQLQNT---VHELEAA 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 667 FHHTKDELREKTLALKHAQRDLSQTQCQMKEVEHMFQDEQGKVSKFMGKQESIEErlAQLQSENTLLRQQLDDAANKAES 746
Cdd:pfam15921 158 KCLKEDMLEDSNTQIEQLRKMMLSHEGVLQEIRSILVDFEEASGKKIYEHDSMST--MHFRSLGSAISKILRELDTEISY 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 747 KDKTIVNIQDQFQDVLTRFQAESQRHSLRLEDRNQELVSE----CSHLRERLC----QYENEKAEREVVVRQLQQELADT 818
Cdd:pfam15921 236 LKGRIFPVEDQLEALKSESQNKIELLLQQHQDRIEQLISEheveITGLTEKASsarsQANSIQSQLEIIQEQARNQNSMY 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 819 LKKQSMSEASLevsSRYRSNLEEEAR-------DLKKKLGQLRSQLQEARDQHREAVHHAEKMEDHLQKL--ELEKSKFE 889
Cdd:pfam15921 316 MRQLSDLESTV---SQLRSELREAKRmyedkieELEKQLVLANSELTEARTERDQFSQESGNLDDQLQKLlaDLHKREKE 392
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 890 ITIKKQSEE------------IDQLQENLSRVNLSEEDKEKLQKL--TELKESLECTVDQEQKRSSALEK------ELAE 949
Cdd:pfam15921 393 LSLEKEQNKrlwdrdtgnsitIDHLRRELDDRNMEVQRLEALLKAmkSECQGQMERQMAAIQGKNESLEKvssltaQLES 472
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 950 FKEVLKMTKKELN----EYENRELNLrQDIKNNHLEMDIPVSTLIKKIDDLTAKLETASSKCLHLgkknqllQQELLLMR 1025
Cdd:pfam15921 473 TKEMLRKVVEELTakkmTLESSERTV-SDLTASLQEKERAIEATNAEITKLRSRVDLKLQELQHL-------KNEGDHLR 544
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 1026 TIQKKCGKLEKNKKQLEQEVVNLRSHMEkNMVEhsQAQQYAREveerARQDLVEKlKQVNLFLQAQAASQESLEQLRENS 1105
Cdd:pfam15921 545 NVQTECEALKLQMAEKDKVIEILRQQIE-NMTQ--LVGQHGRT----AGAMQVEK-AQLEKEINDRRLELQEFKILKDKK 616
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1907172253 1106 NASVRsQMELRIKDLESQLYRMKAQEDFDKIELEKYKQLYQEEFRARKSLSSKLNKTSEKLE 1167
Cdd:pfam15921 617 DAKIR-ELEARVSDLELEKVKLVNAGSERLRAVKDIKQERDQLLNEVKTSRNELNSLSEDYE 677
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
709-973 |
2.17e-04 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 45.78 E-value: 2.17e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 709 VSKFMGKQESIEERLAQLQSENTLlrQQLDDAANKAESKDKTIVNIQDQFQDVLTRFQAESQRHS----LRLEDRNQEL- 783
Cdd:COG3206 73 LSSLSASDSPLETQIEILKSRPVL--ERVVDKLNLDEDPLGEEASREAAIERLRKNLTVEPVKGSnvieISYTSPDPELa 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 784 ------VSEcSHLRERLcqyENEKAEREVVVRQLQQELADTLKKQSMSEASLEvssRYRS-----NLEEEARDLKKKLGQ 852
Cdd:COG3206 151 aavanaLAE-AYLEQNL---ELRREEARKALEFLEEQLPELRKELEEAEAALE---EFRQknglvDLSEEAKLLLQQLSE 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 853 LRSQLQEARDQHREAVHHAEKMEDhlqklELEKSKFEITIKKQSEEIDQLQENLSRVNLSEEDKE--------KLQKLTE 924
Cdd:COG3206 224 LESQLAEARAELAEAEARLAALRA-----QLGSGPDALPELLQSPVIQQLRAQLAELEAELAELSarytpnhpDVIALRA 298
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 1907172253 925 LKESLECTVDQEQKRS-SALEKELAEFKEVLKMTKKELNEYENRELNLRQ 973
Cdd:COG3206 299 QIAALRAQLQQEAQRIlASLEAELEALQAREASLQAQLAQLEARLAELPE 348
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
435-1073 |
3.49e-04 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 45.11 E-value: 3.49e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 435 KSHLNQVLEERN----ETQRQLSREQNARMLQDGILASHL----CKQKEIEMTQKKMTSEVSVSHEKEKDLLHKNQRLQD 506
Cdd:pfam15921 73 KEHIERVLEEYShqvkDLQRRLNESNELHEKQKFYLRQSVidlqTKLQEMQMERDAMADIRRRESQSQEDLRNQLQNTVH 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 507 EVAVLR-LEMDTIKSHNQEKEK----------------RYLEDIKIANEK----NDNLQRM---------VKLNEETFTK 556
Cdd:pfam15921 153 ELEAAKcLKEDMLEDSNTQIEQlrkmmlshegvlqeirSILVDFEEASGKkiyeHDSMSTMhfrslgsaiSKILRELDTE 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 557 T------IFQYTGQLNSLKAENT-----MLSSKLDNEKQNKERLETDVESFRSRLASALHDHAEIQTakrDLEIAFQRAR 625
Cdd:pfam15921 233 IsylkgrIFPVEDQLEALKSESQnkielLLQQHQDRIEQLISEHEVEITGLTEKASSARSQANSIQS---QLEIIQEQAR 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 626 DE---WFRVKDKMNFDMSNLR-----------DNNEVLSQQL---------SKTER------------KLNSLEIEFHHT 670
Cdd:pfam15921 310 NQnsmYMRQLSDLESTVSQLRselreakrmyeDKIEELEKQLvlanselteARTERdqfsqesgnlddQLQKLLADLHKR 389
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 671 KDELR-EK-------------TLALKHAQRDLSQTQCQMKEVEHMFQ----DEQGKVSKFM----GKQESIEE---RLAQ 725
Cdd:pfam15921 390 EKELSlEKeqnkrlwdrdtgnSITIDHLRRELDDRNMEVQRLEALLKamksECQGQMERQMaaiqGKNESLEKvssLTAQ 469
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 726 LQSENTLLRQQLDDAANKA---ESKDKTIVNIQDQFQDVLTRFQAESQRHSlRLEDRNQELVSECSHLRERLCQYENEKA 802
Cdd:pfam15921 470 LESTKEMLRKVVEELTAKKmtlESSERTVSDLTASLQEKERAIEATNAEIT-KLRSRVDLKLQELQHLKNEGDHLRNVQT 548
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 803 EREVVVRQL--QQELADTLKKQSMSEASL-EVSSRYRSNLEEEARDLKKKLGQLRSQLQEARDQHREAVHHAEKMEDHLQ 879
Cdd:pfam15921 549 ECEALKLQMaeKDKVIEILRQQIENMTQLvGQHGRTAGAMQVEKAQLEKEINDRRLELQEFKILKDKKDAKIRELEARVS 628
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 880 KLELEKSKFeitIKKQSEEIDQLQE-NLSRVNLSEEDKEKLQKLTELKESLECTVDQEQKRSSALEKELAEFKEVLKMTK 958
Cdd:pfam15921 629 DLELEKVKL---VNAGSERLRAVKDiKQERDQLLNEVKTSRNELNSLSEDYEVLKRNFRNKSEEMETTTNKLKMQLKSAQ 705
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 959 KELNEYENRELNLRQdiKNNH-----LEMDIPVSTLIKKIDDLTAKLE------TASSKCLHLGK--KNQLLQQELLLMR 1025
Cdd:pfam15921 706 SELEQTRNTLKSMEG--SDGHamkvaMGMQKQITAKRGQIDALQSKIQfleeamTNANKEKHFLKeeKNKLSQELSTVAT 783
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|.
gi 1907172253 1026 TIQKKCGKLE---KNKKQLEQEVVNLRSHMEKNMVEHSQAQQYAREVEERA 1073
Cdd:pfam15921 784 EKNKMAGELEvlrSQERRLKEKVANMEVALDKASLQFAECQDIIQRQEQES 834
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
732-929 |
4.13e-04 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 44.76 E-value: 4.13e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 732 LLRQQLDDAANKAESKD-KTIVNIQDQFQDVLTRFQAESQRhslrlEDRNQELVSECSHLRERLCQYENEKAEREVVVRQ 810
Cdd:COG4717 46 MLLERLEKEADELFKPQgRKPELNLKELKELEEELKEAEEK-----EEEYAELQEELEELEEELEELEAELEELREELEK 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 811 LQQELADTLKKQSMSEASLEVSS------------RYRSNLEEEARDLKKKLGQLRSQLQEARDQHREAVHHA-EKMEDH 877
Cdd:COG4717 121 LEKLLQLLPLYQELEALEAELAElperleeleerlEELRELEEELEELEAELAELQEELEELLEQLSLATEEElQDLAEE 200
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 1907172253 878 LQKLELEKSKFEITIKKQSEEIDQLQENLSRVNLSEEDKEKLQKLTELKESL 929
Cdd:COG4717 201 LEELQQRLAELEEELEEAQEELEELEEELEQLENELEAAALEERLKEARLLL 252
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
717-1189 |
5.17e-04 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 44.40 E-value: 5.17e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 717 ESIEERLAQLQSENTLLRQQLDDAANKAESKDKTIVNIQdqfqdvLTRFQAESQRHSLR-----LEDRNQELVSECSHLR 791
Cdd:pfam01576 85 EEEEERSQQLQNEKKKMQQHIQDLEEQLDEEEAARQKLQ------LEKVTTEAKIKKLEedillLEDQNSKLSKERKLLE 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 792 ERLCQYENEKAEREVVVRQLQQ----------ELADTLKKQSMSEASLEVSSRyrsNLEEEARDLKKKLGQLRSQLQEAR 861
Cdd:pfam01576 159 ERISEFTSNLAEEEEKAKSLSKlknkheamisDLEERLKKEEKGRQELEKAKR---KLEGESTDLQEQIAELQAQIAELR 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 862 DQHREAVHHAEKMEDHLQKLELEKSKFEITIKKQSEEIDQLQENLSRVNLSEEDKEKLQK---------LTELKESLECT 932
Cdd:pfam01576 236 AQLAKKEEELQAALARLEEETAQKNNALKKIRELEAQISELQEDLESERAARNKAEKQRRdlgeelealKTELEDTLDTT 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 933 VDQEQKRSSAlEKELAEFKEVLKmtkKELNEYENRELNLRQdiKNNhlemdipvstliKKIDDLTAKLETASSKCLHLGK 1012
Cdd:pfam01576 316 AAQQELRSKR-EQEVTELKKALE---EETRSHEAQLQEMRQ--KHT------------QALEELTEQLEQAKRNKANLEK 377
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 1013 KN----QLLQQELLLMRTIQKKCGKLEKNKKQLEQEVVNLrshmeknMVEHSQAqqyareveERARQDLVEKLKQVNLFL 1088
Cdd:pfam01576 378 AKqaleSENAELQAELRTLQQAKQDSEHKRKKLEGQLQEL-------QARLSES--------ERQRAELAEKLSKLQSEL 442
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 1089 QAQAASQESLEqlrensNASVRSQMELriKDLESQLyrmkaqedfdkielEKYKQLYQEEFRARKSLSSKLNKTSEKLEE 1168
Cdd:pfam01576 443 ESVSSLLNEAE------GKNIKLSKDV--SSLESQL--------------QDTQELLQEETRQKLNLSTRLRQLEDERNS 500
|
490 500
....*....|....*....|.
gi 1907172253 1169 ASSKLLLEEQQNRSLLSTLST 1189
Cdd:pfam01576 501 LQEQLEEEEEAKRNVERQLST 521
|
|
| ClpA |
COG0542 |
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein ... |
841-963 |
6.04e-04 |
|
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 440308 [Multi-domain] Cd Length: 836 Bit Score: 44.30 E-value: 6.04e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 841 EEARDLKKKLGQLRSQLQEA-RDQHREAVHHAEKMEDHLQKLElekskfeitikkqsEEIDQLQENLsrvnlsEEDKEKL 919
Cdd:COG0542 411 EELDELERRLEQLEIEKEALkKEQDEASFERLAELRDELAELE--------------EELEALKARW------EAEKELI 470
|
90 100 110 120
....*....|....*....|....*....|....*....|....
gi 1907172253 920 QKLTELKESLEctvdQEQKRSSALEKELAEFKEVLKMTKKELNE 963
Cdd:COG0542 471 EEIQELKEELE----QRYGKIPELEKELAELEEELAELAPLLRE 510
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
681-867 |
6.58e-04 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 43.67 E-value: 6.58e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 681 LKHAQRDLSQTQCQMKEVEHMFQDEQGKVSKFMGKQESIEERLAQLQSENTLLRQQLDDAANKAESK----DKTIVNIQ- 755
Cdd:COG3883 18 IQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERreelGERARALYr 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 756 --------------DQFQDVLTRFQAESqrhslRLEDRNQELVSECSHLRERLcqyENEKAEREVVVRQLQQELADTLKK 821
Cdd:COG3883 98 sggsvsyldvllgsESFSDFLDRLSALS-----KIADADADLLEELKADKAEL---EAKKAELEAKLAELEALKAELEAA 169
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 1907172253 822 QSMSEASLEVSSRYRSNLEEEARDLKKKLGQLRSQLQEARDQHREA 867
Cdd:COG3883 170 KAELEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAA 215
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
839-1006 |
6.88e-04 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 42.60 E-value: 6.88e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 839 LEEEARDLKKKLGQLRSQLQEARDQHreavhhaEKMEDHLQKLELEKSKFEITIKKQSEEIDQLQENLSRVNLSEEdkek 918
Cdd:COG1579 22 LEHRLKELPAELAELEDELAALEARL-------EAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQLGNVRNNKE---- 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 919 LQKLTELKESLEctvdqeqKRSSALEKELAEFKEVLKMTKKELNEYENRELNLRQDIKNNHLEMDIPVSTLIKKIDDLTA 998
Cdd:COG1579 91 YEALQKEIESLK-------RRISDLEDEILELMERIEELEEELAELEAELAELEAELEEKKAELDEELAELEAELEELEA 163
|
....*...
gi 1907172253 999 KLETASSK 1006
Cdd:COG1579 164 EREELAAK 171
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
886-1188 |
6.97e-04 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 44.29 E-value: 6.97e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 886 SKFEITIKKQSEEIDQLQENLSRVNLSE--------------EDKEKLQKLTELKESLECTVDQEQKRS-----SALEKE 946
Cdd:TIGR02169 166 AEFDRKKEKALEELEEVEENIERLDLIIdekrqqlerlrrerEKAERYQALLKEKREYEGYELLKEKEAlerqkEAIERQ 245
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 947 LAEFKEVLKMTKKELNEYENRELNLRQDIKNNHLEMDIPVS----TLIKKIDDLTAKLETASSKclhLGKKNQLLQQELL 1022
Cdd:TIGR02169 246 LASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLGEeeqlRVKEKIGELEAEIASLERS---IAEKERELEDAEE 322
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 1023 LMRTIQKKCGKLEKNKKQLEQEVVNLRSHMEKNMVEHSQaqqyAREVEERARQDLVEKLKQVNLFLQAQAASQESLEQLR 1102
Cdd:TIGR02169 323 RLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAE----LKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLK 398
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 1103 ENSNASVRSQMEL--RIKDLESQLYRMKAqedfdkiELEKYKQLYQEEFRARKSLSSKLNKTSEKLEEASSKLLLEEQQN 1180
Cdd:TIGR02169 399 REINELKRELDRLqeELQRLSEELADLNA-------AIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQEL 471
|
....*...
gi 1907172253 1181 RSLLSTLS 1188
Cdd:TIGR02169 472 YDLKEEYD 479
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
323-995 |
1.15e-03 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 43.59 E-value: 1.15e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 323 KRLIELKRSHCELLTGKLKRMENKYKGlQKEMSETEEVKSRLEHEKVGWEQELCRLRFALKQEEEKRRSADQL---SEKT 399
Cdd:PTZ00121 1212 RKAEEARKAEDAKKAEAVKKAEEAKKD-AEEAKKAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKADELkkaEEKK 1290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 400 SEQLRRKGEQCQSEVEARQQLEASLRTleMELKTVKSHLNQVLEERNETQRQLSREQNARMLQDGILASHLCKQKEIEMT 479
Cdd:PTZ00121 1291 KADEAKKAEEKKKADEAKKKAEEAKKA--DEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEA 1368
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 480 QKKMTSEVSVSHE---KEKDLLHKNQRLQDEVAVLRLEMDTIKSHNQEKE-----KRYLEDIKIANEKNDNLQRMVKLnE 551
Cdd:PTZ00121 1369 AEKKKEEAKKKADaakKKAEEKKKADEAKKKAEEDKKKADELKKAAAAKKkadeaKKKAEEKKKADEAKKKAEEAKKA-D 1447
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 552 ETFTKTIFQYTGQLNSLKAENTMLSSKLDN---EKQNKERLETDVESFRSRLASALHDHAEIQTAKRDLEIAFQRARDEW 628
Cdd:PTZ00121 1448 EAKKKAEEAKKAEEAKKKAEEAKKADEAKKkaeEAKKADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADEA 1527
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 629 FRVKDKMNFDmsNLRDNNEVL-SQQLSKTERKLNSLEI-EFHHTKDELREKTLALKHAQRDLSQTQCQMKEVEHMFQDEQ 706
Cdd:PTZ00121 1528 KKAEEAKKAD--EAKKAEEKKkADELKKAEELKKAEEKkKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEK 1605
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 707 GKVSKFMGKQESIEERLAQLQSENTLLRQQLDDAANKAESKDKTivnIQDQFQDVLTRFQAESQRHSLRLEDRNQELVSE 786
Cdd:PTZ00121 1606 KMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKA---EELKKAEEENKIKAAEEAKKAEEDKKKAEEAKK 1682
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 787 CSHLRERLCQYENEKAEREVVVRQLQQELADTLKKQSMSEASLEVSSRYRSNLEEEARDLKKKLGQLRSQLQEARD-QHR 865
Cdd:PTZ00121 1683 AEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDKKKAEEAKKDEEEKKKiAHL 1762
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 866 EAVHHAEKMEDHLQKLELEKSKFEITIKKQSEEIDQLQENL--SRVNLSEEDKEKLQKLTELKESLECTVDQEQKRSSAL 943
Cdd:PTZ00121 1763 KKEEEKKAEEIRKEKEAVIEEELDEEDEKRRMEVDKKIKDIfdNFANIIEGGKEGNLVINDSKEMEDSAIKEVADSKNMQ 1842
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|...
gi 1907172253 944 EKELAEFKEVLKMTKKELNEYENRELNLRQDIKN-NHLEMDIPVSTLIKKIDD 995
Cdd:PTZ00121 1843 LEEADAFEKHKFNKNNENGEDGNKEADFNKEKDLkEDDEEEIEEADEIEKIDK 1895
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
621-1173 |
1.35e-03 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 43.13 E-value: 1.35e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 621 FQRARDEWFRVKDKMNFDMSNLRDnnevLSQQLSKTERKLNSLEIEFHHTKDELREKTLALKHAQRDLSQTQCQMKEVEH 700
Cdd:PRK03918 160 YENAYKNLGEVIKEIKRRIERLEK----FIKRTENIEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKELEE 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 701 M---FQDEQGKVSKFMGKQESIEERLAQLQSENTLLRQQLDDAankaESKDKTIVNIQDQFQD--VLTRFQAESQRHSLR 775
Cdd:PRK03918 236 LkeeIEELEKELESLEGSKRKLEEKIRELEERIEELKKEIEEL----EEKVKELKELKEKAEEyiKLSEFYEEYLDELRE 311
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 776 LEDRNQELVSECSHLRERLCQYENEKAErevvVRQLQQELADTLKKQSMSEASLEVSSRYRSnLEEEARDLKKKLGQLrs 855
Cdd:PRK03918 312 IEKRLSRLEEEINGIEERIKELEEKEER----LEELKKKLKELEKRLEELEERHELYEEAKA-KKEELERLKKRLTGL-- 384
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 856 QLQEARDQHREAVHHAEKMEDHLQKLELEKSKFEITIKKQSEEIDQLQEN-----LSRVNLSEEDKEKLqkLTELKESLe 930
Cdd:PRK03918 385 TPEKLEKELEELEKAKEEIEEEISKITARIGELKKEIKELKKAIEELKKAkgkcpVCGRELTEEHRKEL--LEEYTAEL- 461
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 931 ctvdqeqkrsSALEKELAEFKEVLKMTKKELNEYENRELNLRQDIKNNHLEMDIPV------STLIKKIDDLTAKLETAS 1004
Cdd:PRK03918 462 ----------KRIEKELKEIEEKERKLRKELRELEKVLKKESELIKLKELAEQLKEleeklkKYNLEELEKKAEEYEKLK 531
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 1005 SKCLHLGKKNQLLQQELLLMRTIQKKCGKLEKNKKQLEQEVVNLRSHMEKNMVEH-SQAQQYAREVEERARQDLveKLKQ 1083
Cdd:PRK03918 532 EKLIKLKGEIKSLKKELEKLEELKKKLAELEKKLDELEEELAELLKELEELGFESvEELEERLKELEPFYNEYL--ELKD 609
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 1084 VNLFLQAQAASQESLEQLRENSNASVrSQMELRIKDLESQLYRMKAQedFDKIELEKYKQLYQEEFRARKSLSSKLNKTS 1163
Cdd:PRK03918 610 AEKELEREEKELKKLEEELDKAFEEL-AETEKRLEELRKELEELEKK--YSEEEYEELREEYLELSRELAGLRAELEELE 686
|
570
....*....|
gi 1907172253 1164 EKLEEASSKL 1173
Cdd:PRK03918 687 KRREEIKKTL 696
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
836-1093 |
1.46e-03 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 42.83 E-value: 1.46e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 836 RSNLEEEARDLKKKLGQLRSQLQEARDQHREAVHHAEKMEDHLQKLELEKSKFEitikkqsEEIDQLQENLSRVNLSEED 915
Cdd:COG4717 48 LERLEKEADELFKPQGRKPELNLKELKELEEELKEAEEKEEEYAELQEELEELE-------EELEELEAELEELREELEK 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 916 KEKLQKLTELKESLEctvdqeqkrssALEKELAEFKEVLKMTKKELNEYENRELNLRQdiknnhlemdipvstLIKKIDD 995
Cdd:COG4717 121 LEKLLQLLPLYQELE-----------ALEAELAELPERLEELEERLEELRELEEELEE---------------LEAELAE 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 996 LTAKLETAsskclhlgkKNQLLQQELLLMRTIQKKCGKLEKNKKQLEQEVVNLRSHMEknmvehSQAQQYAREVEERARQ 1075
Cdd:COG4717 175 LQEELEEL---------LEQLSLATEEELQDLAEELEELQQRLAELEEELEEAQEELE------ELEEELEQLENELEAA 239
|
250
....*....|....*...
gi 1907172253 1076 DLVEKLKQVNLFLQAQAA 1093
Cdd:COG4717 240 ALEERLKEARLLLLIAAA 257
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
672-863 |
1.51e-03 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 43.02 E-value: 1.51e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 672 DELREKTLALKHAQRDLSQTQCQMKEV----EHM-FQDEQGKVSKFMGKQESIEERLAQLQSENTLLRQQLDDAANKAES 746
Cdd:PRK04863 938 EQLKQDYQQAQQTQRDAKQQAFALTEVvqrrAHFsYEDAAEMLAKNSDLNEKLRQRLEQAEQERTRAREQLRQAQAQLAQ 1017
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 747 KDKTivniqdqFQDVLTRFQAESQRHslrledrnQELVSECSHLRERLCQYENEKAerevvvRQLQQELADTLKKQSMSE 826
Cdd:PRK04863 1018 YNQV-------LASLKSSYDAKRQML--------QELKQELQDLGVPADSGAEERA------RARRDELHARLSANRSRR 1076
|
170 180 190
....*....|....*....|....*....|....*..
gi 1907172253 827 ASLEvssRYRSNLEEEARDLKKKLGQLRSQLQEARDQ 863
Cdd:PRK04863 1077 NQLE---KQLTFCEAEMDNLTKKLRKLERDYHEMREQ 1110
|
|
| PLN02939 |
PLN02939 |
transferase, transferring glycosyl groups |
842-1125 |
1.61e-03 |
|
transferase, transferring glycosyl groups
Pssm-ID: 215507 [Multi-domain] Cd Length: 977 Bit Score: 42.97 E-value: 1.61e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 842 EARDLKKKLGQLRSQLQEARDQHREAVH---HAEKMEDHLQKLELEKSKFEIT----IKKQSEEIDQLQ-ENLSRVNLSE 913
Cdd:PLN02939 164 EKEALQGKINILEMRLSETDARIKLAAQekiHVEILEEQLEKLRNELLIRGATeglcVHSLSKELDVLKeENMLLKDDIQ 243
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 914 EDKEKLQKLTELKESLectvdqeqkrsSALEKELAEFKEVLKmtkkelnEYENRELNLRQDI-KNNHLEMDIpvstLIKK 992
Cdd:PLN02939 244 FLKAELIEVAETEERV-----------FKLEKERSLLDASLR-------ELESKFIVAQEDVsKLSPLQYDC----WWEK 301
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 993 IDDLTAKLETASSKCLHlgkknqlLQQELLLMRTIQKKCGKLEKNKKqlEQEVVNLRSHMEKNMvehsqaQQYAREVEER 1072
Cdd:PLN02939 302 VENLQDLLDRATNQVEK-------AALVLDQNQDLRDKVDKLEASLK--EANVSKFSSYKVELL------QQKLKLLEER 366
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 1907172253 1073 ARQDLVEKLKQVNLFLQAQAASQESLEQLRENSNasvRSQMELRIKDLESQLY 1125
Cdd:PLN02939 367 LQASDHEIHSYIQLYQESIKEFQDTLSKLKEESK---KRSLEHPADDMPSEFW 416
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
793-954 |
1.84e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 41.45 E-value: 1.84e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 793 RLCQYENEKAEREVVVRQLQQELADTLKKQSMSEASLEVSSRYRSNLEEEARDLKKKLGQLRSQLQEARDQhREavhhAE 872
Cdd:COG1579 18 ELDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQLGNVRNN-KE----YE 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 873 KMEDHLQKLELEKSKFEITIKKQSEEIDQLQENLSRvnLSEEDKEKLQKLTELKESLECTVDQEQKRSSALEKELAEFKE 952
Cdd:COG1579 93 ALQKEIESLKRRISDLEDEILELMERIEELEEELAE--LEAELAELEAELEEKKAELDEELAELEAELEELEAEREELAA 170
|
..
gi 1907172253 953 VL 954
Cdd:COG1579 171 KI 172
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
347-955 |
2.03e-03 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 42.52 E-value: 2.03e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 347 YKGLQKEMSETEEVKSRLEHEKVGwEQELCRLRFALK----QEEEKRRSADQLSEKTSEQLRRKGEQCQSEV-EARQQL- 420
Cdd:pfam12128 233 IAGIMKIRPEFTKLQQEFNTLESA-ELRLSHLHFGYKsdetLIASRQEERQETSAELNQLLRTLDDQWKEKRdELNGELs 311
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 421 --EASLRTLEMELKTVKSHLNQVLEERNET----QRQLSREQNARMLQDGILASHLCKQKEIEMTQKKMTSEVSVSHEKE 494
Cdd:pfam12128 312 aaDAAVAKDRSELEALEDQHGAFLDADIETaaadQEQLPSWQSELENLEERLKALTGKHQDVTAKYNRRRSKIKEQNNRD 391
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 495 KDLLHKNQRLQDEVAVLRLEMDTIKSHNQEKEKRYLEDIKIANEKNDNLQRMVKLNEETFTKTIFQYTGQLNSLKAENTM 574
Cdd:pfam12128 392 IAGIKDKLAKIREARDRQLAVAEDDLQALESELREQLEAGKLEFNEEEYRLKSRLGELKLRLNQATATPELLLQLENFDE 471
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 575 LSSKLDNEKQ----NKERLETDVESFRSRLASALHDH-------AEIQTAKRDLE----------IAFQRA-----RDEW 628
Cdd:pfam12128 472 RIERAREEQEaanaEVERLQSELRQARKRRDQASEALrqasrrlEERQSALDELElqlfpqagtlLHFLRKeapdwEQSI 551
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 629 FRVKDKMNFDMSNL--RDNNEVLSQQLSKTERKLNSLEI---EFHHTKDELREKTLALKHAQRDLSQTQCQMKEvehmfq 703
Cdd:pfam12128 552 GKVISPELLHRTDLdpEVWDGSVGGELNLYGVKLDLKRIdvpEWAASEEELRERLDKAEEALQSAREKQAAAEE------ 625
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 704 dEQGKVSKFMGKQESIEERLAQL--QSENTLLR-----QQLDDAANKA--ESKDKTIVNIQD----------QFQDVLTR 764
Cdd:pfam12128 626 -QLVQANGELEKASREETFARTAlkNARLDLRRlfdekQSEKDKKNKAlaERKDSANERLNSleaqlkqldkKHQAWLEE 704
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 765 FQAESQRHSLRLEDRNQELVSECSHLRERLCQ-YENEKAEREVVVRQLQQELADTLKKQSMSEASLEVSSRYRSNLE--- 840
Cdd:pfam12128 705 QKEQKREARTEKQAYWQVVEGALDAQLALLKAaIAARRSGAKAELKALETWYKRDLASLGVDPDVIAKLKREIRTLErki 784
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 841 EEARDLKKKLGQLRSQLQEARDQHREAV--------HHAEKMEDHL-----------QKLELEKSKFEITIKKQSEEIDQ 901
Cdd:pfam12128 785 ERIAVRRQEVLRYFDWYQETWLQRRPRLatqlsnieRAISELQQQLarliadtklrrAKLEMERKASEKQQVRLSENLRG 864
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|....*..
gi 1907172253 902 LQENLSRVNLSEEDKEKLQKLTELKESLECTVDQEQKR---SSALEKELAEFKEVLK 955
Cdd:pfam12128 865 LRCEMSKLATLKEDANSEQAQGSIGERLAQLEDLKLKRdylSESVKKYVEHFKNVIA 921
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
715-942 |
2.54e-03 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 41.74 E-value: 2.54e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 715 KQESIEERLAQLQSENTLLRQQLDDAANKAESKDKTIVNIQDQfqdvLTRFQAESQRHSLRLEDRNQELVSECSHLRERL 794
Cdd:COG3883 17 QIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAE----LEALQAEIDKLQAEIAEAEAEIEERREELGERA 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 795 -CQYENEKAEREVVVRQLQQELADTLKKQSMseasLEVSSRYRSNLEEEARDLKKKLGQLRSQLQEARDQHREAvhhAEK 873
Cdd:COG3883 93 rALYRSGGSVSYLDVLLGSESFSDFLDRLSA----LSKIADADADLLEELKADKAELEAKKAELEAKLAELEAL---KAE 165
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1907172253 874 MEDHLQKLELEKSKFEITIKKQSEEIDQLQENLSRVNLSEEDKEKLQKLTELKESLECTVDQEQKRSSA 942
Cdd:COG3883 166 LEAAKAELEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAAAAAAAA 234
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
608-861 |
2.81e-03 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 41.93 E-value: 2.81e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 608 AEIQTAKRDLEIAFQRARDewFRVKDkmnfDMSNLRDNNEVLSQQLSKTERKLNSLEIEfhhtkdeLREKTLALKHAQRD 687
Cdd:COG3206 182 EQLPELRKELEEAEAALEE--FRQKN----GLVDLSEEAKLLLQQLSELESQLAEARAE-------LAEAEARLAALRAQ 248
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 688 LSQTQCQMKEVehmfqdeqgkvskfmgkqeSIEERLAQLQSENTLLRQQLDDAANKAESKDKTIVNIQDQFQDVLTRFQA 767
Cdd:COG3206 249 LGSGPDALPEL-------------------LQSPVIQQLRAQLAELEAELAELSARYTPNHPDVIALRAQIAALRAQLQQ 309
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 768 ESQRhslrledrnqelvsecshlreRLCQYENEKAEREVVVRQLQQELADtLKKQSMSEASLEVssRYRsNLEEEARDLK 847
Cdd:COG3206 310 EAQR---------------------ILASLEAELEALQAREASLQAQLAQ-LEARLAELPELEA--ELR-RLEREVEVAR 364
|
250
....*....|....
gi 1907172253 848 KKLGQLRSQLQEAR 861
Cdd:COG3206 365 ELYESLLQRLEEAR 378
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
680-875 |
2.99e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 41.67 E-value: 2.99e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 680 ALKHAQRDLSQTQCQMKEVEHMFQDEQGKVSKFMGKQESIEERLAQ-------LQSENTLLRQQLDDAANKAESKDKTIV 752
Cdd:COG4942 21 AAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAAlarriraLEQELAALEAELAELEKEIAELRAELE 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 753 NIQDQFQDVLTRFQAESQRHSLRL---------EDRNQELVSECS-HLRERLCQYENEKAEREVVVRQLQQE---LADTL 819
Cdd:COG4942 101 AQKEELAELLRALYRLGRQPPLALllspedfldAVRRLQYLKYLApARREQAEELRADLAELAALRAELEAEraeLEALL 180
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 1907172253 820 KKQSMSEASLEVSSRYRSNLEEEARDLKKKLGQLRSQLQEARDQHREAVHHAEKME 875
Cdd:COG4942 181 AELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEA 236
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
990-1169 |
4.02e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 41.82 E-value: 4.02e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 990 IKKIDDLTAKLETASSKCLHLGKKNQLLQQELLLMRTIQKKCGKL------EKNKKQLEQEVVNL---RSHMEKNMVEHS 1060
Cdd:COG4913 609 RAKLAALEAELAELEEELAEAEERLEALEAELDALQERREALQRLaeyswdEIDVASAEREIAELeaeLERLDASSDDLA 688
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 1061 QAQQYAREVEERaRQDLVEKLKQVNLFLQAQAASQESLEQLRENSNASVRSQMELRIKDLESQLYRMKAQEDFDKIELEK 1140
Cdd:COG4913 689 ALEEQLEELEAE-LEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLELRALLEERFAAALGDAVEREL 767
|
170 180
....*....|....*....|....*....
gi 1907172253 1141 YKQLYQEefraRKSLSSKLNKTSEKLEEA 1169
Cdd:COG4913 768 RENLEER----IDALRARLNRAEEELERA 792
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
535-955 |
4.11e-03 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 41.48 E-value: 4.11e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 535 IANEKNDNLQRMVKLNEETFTKTifqytGQLNSLKAENTMLSSKLDNEKQNKERLETDVESFRSRLASAlhdhaeiQTAK 614
Cdd:PRK04863 277 HANERRVHLEEALELRRELYTSR-----RQLAAEQYRLVEMARELAELNEAESDLEQDYQAASDHLNLV-------QTAL 344
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 615 RDLEiAFQRARDEWFRVKDKmnfdmsnLRDNNEVL---SQQLSKTERKLNSLEIEFHHTK----------DELREKTLAL 681
Cdd:PRK04863 345 RQQE-KIERYQADLEELEER-------LEEQNEVVeeaDEQQEENEARAEAAEEEVDELKsqladyqqalDVQQTRAIQY 416
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 682 KHAQRDL--SQTQCQMKEVEhmfqdeqgkvskfmgkQESIEERLAQLQSENTLLRQQLDDAANKAESKDktivNIQDQFQ 759
Cdd:PRK04863 417 QQAVQALerAKQLCGLPDLT----------------ADNAEDWLEEFQAKEQEATEELLSLEQKLSVAQ----AAHSQFE 476
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 760 dvltrfQAESQRHSLRLE-DRNQELvsecSHLRERLCQYENEK--AEREVVVRQLQQELADTLKKQSMSEASL-EVSSRY 835
Cdd:PRK04863 477 ------QAYQLVRKIAGEvSRSEAW----DVARELLRRLREQRhlAEQLQQLRMRLSELEQRLRQQQRAERLLaEFCKRL 546
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 836 RSNLEEEArDLKKKLGQLRSQLQEARDQHREAVHHAEKMEDHLQKLELEKSKFEitikKQSEEIDQLQENLSRVN-LSEE 914
Cdd:PRK04863 547 GKNLDDED-ELEQLQEELEARLESLSESVSEARERRMALRQQLEQLQARIQRLA----ARAPAWLAAQDALARLReQSGE 621
|
410 420 430 440
....*....|....*....|....*....|....*....|..
gi 1907172253 915 DKEKLQKLTELKESLectvdQEQKRSSALEK-ELAEFKEVLK 955
Cdd:PRK04863 622 EFEDSQDVTEYMQQL-----LERERELTVERdELAARKQALD 658
|
|
| MAD |
pfam05557 |
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint ... |
764-967 |
4.20e-03 |
|
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins. The mitotic spindle checkpoint monitors proper attachment of the bipolar spindle to the kinetochores of aligned sister chromatids and causes a cell cycle arrest in prometaphase when failures occur. Multiple components of the mitotic spindle checkpoint have been identified in yeast and higher eukaryotes. In S.cerevisiae, the existence of a Mad1-dependent complex containing Mad2, Mad3, Bub3 and Cdc20 has been demonstrated.
Pssm-ID: 461677 [Multi-domain] Cd Length: 660 Bit Score: 41.26 E-value: 4.20e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 764 RFQAESQRHSL-----RLEDRNQELVSECSHLRERLCQYENEKAEREVVVRQLQQELADTLKKQSMSEASLEVSSRYRSN 838
Cdd:pfam05557 29 RIELEKKASALkrqldRESDRNQELQKRIRLLEKREAEAEEALREQAELNRLKKKYLEALNKKLNEKESQLADAREVISC 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 839 LEEEARDLKKKLGQLRSQLQEARDQHREAVHHAEKMEDHLQKLELEKSKFEITIKKQSEEIDQLQENLSRVNLSEEDKEK 918
Cdd:pfam05557 109 LKNELSELRRQIQRAELELQSTNSELEELQERLDLLKAKASEAEQLRQNLEKQQSSLAEAEQRIKELEFEIQSQEQDSEI 188
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 1907172253 919 LQKLTELKESLEcTVDQEQKRSSALEKELAEFKEVLKMTKKELNEYENR 967
Cdd:pfam05557 189 VKNSKSELARIP-ELEKELERLREHNKHLNENIENKLLLKEEVEDLKRK 236
|
|
| MAD |
pfam05557 |
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint ... |
652-1189 |
4.81e-03 |
|
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins. The mitotic spindle checkpoint monitors proper attachment of the bipolar spindle to the kinetochores of aligned sister chromatids and causes a cell cycle arrest in prometaphase when failures occur. Multiple components of the mitotic spindle checkpoint have been identified in yeast and higher eukaryotes. In S.cerevisiae, the existence of a Mad1-dependent complex containing Mad2, Mad3, Bub3 and Cdc20 has been demonstrated.
Pssm-ID: 461677 [Multi-domain] Cd Length: 660 Bit Score: 41.26 E-value: 4.81e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 652 QLSKTERKLNSLEIEFHHTKDELREKTLALKhaqRDLSQTQCQMKEVehmfqdeQGKVSKfMGKQESIEERLAQLQSENT 731
Cdd:pfam05557 10 RLSQLQNEKKQMELEHKRARIELEKKASALK---RQLDRESDRNQEL-------QKRIRL-LEKREAEAEEALREQAELN 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 732 LLRQQLDDAANKAESKDKTIVNIQDQFQDVLTRFQAESQRHSLRLEDRNQELVSECSHLRERLCQYENEKAEREVVVRQL 811
Cdd:pfam05557 79 RLKKKYLEALNKKLNEKESQLADAREVISCLKNELSELRRQIQRAELELQSTNSELEELQERLDLLKAKASEAEQLRQNL 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 812 QQeladtlKKQSMSEAslevssryrsnlEEEARDLKKKLGQLRSQLQEARDQHREAVHHAEkMEDHLQKLElekskfeit 891
Cdd:pfam05557 159 EK------QQSSLAEA------------EQRIKELEFEIQSQEQDSEIVKNSKSELARIPE-LEKELERLR--------- 210
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 892 ikkqsEEIDQLQENLSRVNLSEEDKEKLQKLTELKESLECTVDQEQKRSSALEKELAEFKEVLKMTKKELN--------- 962
Cdd:pfam05557 211 -----EHNKHLNENIENKLLLKEEVEDLKRKLEREEKYREEAATLELEKEKLEQELQSWVKLAQDTGLNLRspedlsrri 285
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 963 -EYENRELNLRQD----------IKNNHLEMDIPVSTLIKKIDDLTAKLETASSKCLHLGKKNQLLQQELLLMRTI---- 1027
Cdd:pfam05557 286 eQLQQREIVLKEEnssltssarqLEKARRELEQELAQYLKKIEDLNKKLKRHKALVRRLQRRVLLLTKERDGYRAIlesy 365
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 1028 ------QKKCGKLEKNKKQLEQEVVNLRSHMEKNMVEHSQAQQYAREVEERARQDLVE--KLKQVNLFLQAQAASQESLE 1099
Cdd:pfam05557 366 dkeltmSNYSPQLLERIEEAEDMTQKMQAHNEEMEAQLSVAEEELGGYKQQAQTLERElqALRQQESLADPSYSKEEVDS 445
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 1100 QLRENSNASV-RSQMELRIKDLESQLYRMKAQEDFDkieLEKYKQLY------QEEFRARKSLSSKLNKTSEKLEEASSK 1172
Cdd:pfam05557 446 LRRKLETLELeRQRLREQKNELEMELERRCLQGDYD---PKKTKVLHlsmnpaAEAYQQRKNQLEKLQAEIERLKRLLKK 522
|
570
....*....|....*..
gi 1907172253 1173 LLLEEQQNRSLLSTLST 1189
Cdd:pfam05557 523 LEDDLEQVLRLPETTST 539
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
600-863 |
4.98e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 40.90 E-value: 4.98e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 600 LASALHDHAEIQTAKRDLEiAFQRARDEWFRVKDKMNFDMSNLRDNNEVLSQQLSKTERKLNSLEIEFHHTKDELREKTL 679
Cdd:COG4942 12 ALAAAAQADAAAEAEAELE-QLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEK 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 680 ALKHAQRDLSQTQCQMKevehmfqdEQGKVSKFMGKQESIEERLAQLQSENTLLRQQLDDAANKAeskdktivnIQDQFQ 759
Cdd:COG4942 91 EIAELRAELEAQKEELA--------ELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPA---------RREQAE 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 760 DvLTRFQAESQRHSLRLEDRNQELVSECSHLRERLCQYENEKAEREVVVRQLQQELADTLKKQsmseaslevssryrSNL 839
Cdd:COG4942 154 E-LRADLAELAALRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAEL--------------AEL 218
|
250 260
....*....|....*....|....
gi 1907172253 840 EEEARDLKKKLGQLRSQLQEARDQ 863
Cdd:COG4942 219 QQEAEELEALIARLEAEAAAAAER 242
|
|
| Cast |
pfam10174 |
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part ... |
397-1042 |
5.07e-03 |
|
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion. The C-terminus is a PDZ-binding motif that binds directly to RIM (a small G protein Rab-3A effector). The family also contains four coiled-coil domains.
Pssm-ID: 431111 [Multi-domain] Cd Length: 766 Bit Score: 41.35 E-value: 5.07e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 397 EKTSEQLRRKGEQCQSEVEARQQLEASLRTLEMELKTVKshlnQVLEERNETQRQLSReqnarMLQDGILASHLcKQKEI 476
Cdd:pfam10174 112 ELTEENFRRLQSEHERQAKELFLLRKTLEEMELRIETQK----QTLGARDESIKKLLE-----MLQSKGLPKKS-GEEDW 181
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 477 EMTQKKMTSEVSVSH------EKEKDL------LHKNQRLQDEVAVLR-----LEMDTIKSHNQEKEKRYLEDikianek 539
Cdd:pfam10174 182 ERTRRIAEAEMQLGHlevlldQKEKENihlreeLHRRNQLQPDPAKTKalqtvIEMKDTKISSLERNIRDLED------- 254
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 540 ndnLQRMVKLNEETFTKTIFQYTGQLNSLKAENTMLSSKLDNEKQNKERLETDVESFRSRLasalhdhaeiqtakrdlei 619
Cdd:pfam10174 255 ---EVQMLKTNGLLHTEDREEEIKQMEVYKSHSKFMKNKIDQLKQELSKKESELLALQTKL------------------- 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 620 afqrardewfrvkDKMNFDMSNLRDNNEVLSQQLSKTERKLNSLEIEFhhtkDELRektLALKHAQRDLSQTQCQMKEVe 699
Cdd:pfam10174 313 -------------ETLTNQNSDCKQHIEVLKESLTAKEQRAAILQTEV----DALR---LRLEEKESFLNKKTKQLQDL- 371
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 700 hmfQDEQGKvskfmgkqesieerlaqLQSENTLLRQQLDDAANKAESKDKTIVNIQDQFQDvltrfqAESQRHSLRleDR 779
Cdd:pfam10174 372 ---TEEKST-----------------LAGEIRDLKDMLDVKERKINVLQKKIENLQEQLRD------KDKQLAGLK--ER 423
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 780 NQELVSECSHLRERLCQYENEKAEREVVVRQLQQEladtlkKQSMSEASLEVSSRYRsnleEEARDLKKKLGQLRSQLQE 859
Cdd:pfam10174 424 VKSLQTDSSNTDTALTTLEEALSEKERIIERLKEQ------REREDRERLEELESLK----KENKDLKEKVSALQPELTE 493
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 860 ARDQHREAVHHAEKMEDHLQKLELEKSKFEITIKKQSEEIDQLQENLSRVNLSEEDKEKLQKLTELKESLECTVDQEQKR 939
Cdd:pfam10174 494 KESSLIDLKEHASSLASSGLKKDSKLKSLEIAVEQKKEECSKLENQLKKAHNAEEAVRTNPEINDRIRLLEQEVARYKEE 573
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 940 SSALEKELAEFKEVLKMTKKELNEYENRELNLRQDIKNNHLEMDIPVStlikKIDDLTAKLETASSKCLHLGKKNQLLQQ 1019
Cdd:pfam10174 574 SGKAQAEVERLLGILREVENEKNDKDKKIAELESLTLRQMKEQNKKVA----NIKHGQQEMKKKGAQLLEEARRREDNLA 649
|
650 660
....*....|....*....|...
gi 1907172253 1020 ELLLMRTIQKKCGKLEKNKKQLE 1042
Cdd:pfam10174 650 DNSQQLQLEELMGALEKTRQELD 672
|
|
| PRK00409 |
PRK00409 |
recombination and DNA strand exchange inhibitor protein; Reviewed |
837-952 |
5.65e-03 |
|
recombination and DNA strand exchange inhibitor protein; Reviewed
Pssm-ID: 234750 [Multi-domain] Cd Length: 782 Bit Score: 40.97 E-value: 5.65e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 837 SNLEEEARDLKKKLGQLRSQLQEARDQHREAVHHAEKMEDHLQKLELE-KSKFEITIKKQSEEIDQLQENLSRVNLSEED 915
Cdd:PRK00409 523 ASLEELERELEQKAEEAEALLKEAEKLKEELEEKKEKLQEEEDKLLEEaEKEAQQAIKEAKKEADEIIKELRQLQKGGYA 602
|
90 100 110
....*....|....*....|....*....|....*..
gi 1907172253 916 KEKLQKLTELKESLECTVDQEQKRSSALEKELAEFKE 952
Cdd:PRK00409 603 SVKAHELIEARKRLNKANEKKEKKKKKQKEKQEELKV 639
|
|
| TMCO5 |
pfam14992 |
TMCO5 family; The TMCO5 family includes human transmembrane and coiled-coil domain-containing ... |
840-924 |
5.82e-03 |
|
TMCO5 family; The TMCO5 family includes human transmembrane and coiled-coil domain-containing proteins 5A and 5B.
Pssm-ID: 464427 [Multi-domain] Cd Length: 278 Bit Score: 40.09 E-value: 5.82e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 840 EEEARDLKKKLGQLRSqlqEARDQHREAVHHAE-KMEDHLQKLELEKSKFEITIKKQSEEIDQLQENLSR---------- 908
Cdd:pfam14992 30 EEEIQSLEREITLTRS---LAEDEEREELNFTImEKEDALQELELETAKLEKKNEILVKSVMELQRKLSRksdkntgleq 106
|
90
....*....|....*....
gi 1907172253 909 ---VNLSEEDKEKLQKLTE 924
Cdd:pfam14992 107 etlKQMLEELKVKLQQSEE 125
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
651-815 |
5.98e-03 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 41.09 E-value: 5.98e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 651 QQLSKTERKLNSLEIEFHHtKDELREKTLALKHAQRDLSQTQCQMKEV----EHM-FQDEQGKVSKFMGKQESIEERLAQ 725
Cdd:COG3096 917 KALAQLEPLVAVLQSDPEQ-FEQLQADYLQAKEQQRRLKQQIFALSEVvqrrPHFsYEDAVGLLGENSDLNEKLRARLEQ 995
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 726 LQSENTLLRQQLDDAANKAESKDKTIVNIQDQF---QDVLTRFQAESQRHSLRL--------EDRNQELVSECSHLRERL 794
Cdd:COG3096 996 AEEARREAREQLRQAQAQYSQYNQVLASLKSSRdakQQTLQELEQELEELGVQAdaeaeeraRIRRDELHEELSQNRSRR 1075
|
170 180
....*....|....*....|.
gi 1907172253 795 CQYENEKAEREVVVRQLQQEL 815
Cdd:COG3096 1076 SQLEKQLTRCEAEMDSLQKRL 1096
|
|
| Cast |
pfam10174 |
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part ... |
648-1105 |
6.83e-03 |
|
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion. The C-terminus is a PDZ-binding motif that binds directly to RIM (a small G protein Rab-3A effector). The family also contains four coiled-coil domains.
Pssm-ID: 431111 [Multi-domain] Cd Length: 766 Bit Score: 40.96 E-value: 6.83e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 648 VLSQQLSKTERKLNSLEIEFHHTKDELRektlalkhAQRDLSQTqcqmkeVEHMFQDEQGKVSKFMGKQESIEERLAQLQ 727
Cdd:pfam10174 57 VLKEQYRVTQEENQHLQLTIQALQDELR--------AQRDLNQL------LQQDFTTSPVDGEDKFSTPELTEENFRRLQ 122
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 728 S-------ENTLLRQQLDDAANKAESKDKTIVNIQDQFQDVLTRFQAESQRHSLRLED-----RNQELVSECSHLRERLC 795
Cdd:pfam10174 123 SeherqakELFLLRKTLEEMELRIETQKQTLGARDESIKKLLEMLQSKGLPKKSGEEDwertrRIAEAEMQLGHLEVLLD 202
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 796 QYENEKAE-REVVVR--QLQQELADTLKKQSMseasLEVSSRYRSNLEEEARDLKKKLGQLRSQLQEARDQHREAVHHAE 872
Cdd:pfam10174 203 QKEKENIHlREELHRrnQLQPDPAKTKALQTV----IEMKDTKISSLERNIRDLEDEVQMLKTNGLLHTEDREEEIKQME 278
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 873 KMEDHLQKLELEKSKFEITIKKQSEEIDQLQENLSRVNLSEEDKEklQKLTELKESLECtvdqEQKRSSALEKELAEFKE 952
Cdd:pfam10174 279 VYKSHSKFMKNKIDQLKQELSKKESELLALQTKLETLTNQNSDCK--QHIEVLKESLTA----KEQRAAILQTEVDALRL 352
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 953 VLKMTKKELNEYENRELNLRQDiknnhlemdipVSTLIKKIDDLTAKLETASSKCLHLGKKnqlLQQELLLMRTIQKKCG 1032
Cdd:pfam10174 353 RLEEKESFLNKKTKQLQDLTEE-----------KSTLAGEIRDLKDMLDVKERKINVLQKK---IENLQEQLRDKDKQLA 418
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1907172253 1033 KLEKNKKQLEQEVVNLRSH---MEKNMVEHS---QAQQYAREVEERARQDLVEKLKQVNLFLQAQAASQESLEQLRENS 1105
Cdd:pfam10174 419 GLKERVKSLQTDSSNTDTAlttLEEALSEKEriiERLKEQREREDRERLEELESLKKENKDLKEKVSALQPELTEKESS 497
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
830-1062 |
7.64e-03 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 40.68 E-value: 7.64e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 830 EVSSRYRSNLEEEARDLKKKLGQLRSQLQEAR-DQHREAVHHAEKMEDHLQKLELEKSKFEITIKKQSEEIDQLQENLSR 908
Cdd:PRK05771 39 ELSNERLRKLRSLLTKLSEALDKLRSYLPKLNpLREEKKKVSVKSLEELIKDVEEELEKIEKEIKELEEEISELENEIKE 118
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 909 VnlsEEDKEKLQKLTELKESLEC------------TVDQEQKRSSALEKELAEFKE---------VLKMTKKELNEYENR 967
Cdd:PRK05771 119 L---EQEIERLEPWGNFDLDLSLllgfkyvsvfvgTVPEDKLEELKLESDVENVEYistdkgyvyVVVVVLKELSDEVEE 195
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 968 ELNlRQDIKNNHLEMDIPVSTLIKKIDDLTAKLETASSKCLHlgkknqllqqelllmrtiqkkcgKLEKNKKQLEQEVVN 1047
Cdd:PRK05771 196 ELK-KLGFERLELEEEGTPSELIREIKEELEEIEKERESLLE-----------------------ELKELAKKYLEELLA 251
|
250
....*....|....*
gi 1907172253 1048 LRSHMEkNMVEHSQA 1062
Cdd:PRK05771 252 LYEYLE-IELERAEA 265
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
299-727 |
8.19e-03 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 40.43 E-value: 8.19e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 299 IEHLRLECKD----TASLLKIRDAVYSYKRLIELKRSHCELLTG---KLKRMENKYKGLQKEMSETEEVKSRLEH---EK 368
Cdd:PRK03918 268 IEELKKEIEEleekVKELKELKEKAEEYIKLSEFYEEYLDELREiekRLSRLEEEINGIEERIKELEEKEERLEElkkKL 347
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 369 VGWEQELCRLR-------FALKQEEEKRRSADQLSEKTSEQLRRKGEQCQSEVEARQQLEASLRTLEMELKTVKSHLNQV 441
Cdd:PRK03918 348 KELEKRLEELEerhelyeEAKAKKEELERLKKRLTGLTPEKLEKELEELEKAKEEIEEEISKITARIGELKKEIKELKKA 427
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 442 LEERNETQ-------RQLSREQNARmlqdgILASHLCKQKEIEMTQKKMTSEVSvSHEKEKDLLHKNQRLQDEVAVLRLE 514
Cdd:PRK03918 428 IEELKKAKgkcpvcgRELTEEHRKE-----LLEEYTAELKRIEKELKEIEEKER-KLRKELRELEKVLKKESELIKLKEL 501
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 515 MDTIKSHNQEKEKRYLEDIKIANEKNDNL-QRMVKLNEEtfTKTIFQYTGQLNSLKAENTMLSSKLDNEKQNKERLET-- 591
Cdd:PRK03918 502 AEQLKELEEKLKKYNLEELEKKAEEYEKLkEKLIKLKGE--IKSLKKELEKLEELKKKLAELEKKLDELEEELAELLKel 579
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 592 ---------DVESFRSRLASALHDHAEIQTAKRDLEIAFQRARDEwfRVKDKMNFDMSNLRDNN-EVLSQQLSKTERKLN 661
Cdd:PRK03918 580 eelgfesveELEERLKELEPFYNEYLELKDAEKELEREEKELKKL--EEELDKAFEELAETEKRlEELRKELEELEKKYS 657
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1907172253 662 slEIEFHHTKDELREKTLALKHAQRDLSQTQCQMKEVEHMFQD---EQGKVSKFMGKQESIEERLAQLQ 727
Cdd:PRK03918 658 --EEEYEELREEYLELSRELAGLRAELEELEKRREEIKKTLEKlkeELEEREKAKKELEKLEKALERVE 724
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
536-1173 |
9.54e-03 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 40.34 E-value: 9.54e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 536 ANEKNDNLQRMVKLNEETFTKTIFQYTGQLNSLKAENTmlsskldneKQNKERLE--TDVESFRSRLASALHDHAEIQTA 613
Cdd:TIGR00618 125 KSETEEVIHDLLKLDYKTFTRVVLLPQGEFAQFLKAKS---------KEKKELLMnlFPLDQYTQLALMEFAKKKSLHGK 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 614 KRDLEIAFQRARDEWFRVKDKMNFDMSNLRDNNEVLSQQLSKTERKLNSLEIEFHHTKDELReKTLALKHAQRDLSQTQC 693
Cdd:TIGR00618 196 AELLTLRSQLLTLCTPCMPDTYHERKQVLEKELKHLREALQQTQQSHAYLTQKREAQEEQLK-KQQLLKQLRARIEELRA 274
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 694 QMKEVEHMFQ--DEQGKVSKFMGKQESIEERLAQLQSENTLLRQQLddaaNKAESKDKTIVNIQDQFQDVLTRFQAESQR 771
Cdd:TIGR00618 275 QEAVLEETQEriNRARKAAPLAAHIKAVTQIEQQAQRIHTELQSKM----RSRAKLLMKRAAHVKQQSSIEEQRRLLQTL 350
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 772 HslRLEDRNQELVSECSHLRERLCQyenEKAEREVVVRQLQQELADTLKKQSMSEASLEVSSRYRSNLEEEA--RDLKKK 849
Cdd:TIGR00618 351 H--SQEIHIRDAHEVATSIREISCQ---QHTLTQHIHTLQQQKTTLTQKLQSLCKELDILQREQATIDTRTSafRDLQGQ 425
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 850 LGQLRSQLQ------EARDQHREAVHHAEKMEDHLQKLELEKSKFEITIKKQSEEIDQL-----QENLSRVNLSEEDKEK 918
Cdd:TIGR00618 426 LAHAKKQQElqqryaELCAAAITCTAQCEKLEKIHLQESAQSLKEREQQLQTKEQIHLQetrkkAVVLARLLELQEEPCP 505
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 919 LQKLT-----ELKESLECTVDqeQKRSSALEKELAEFKEVLKMTKKELNEyenrELNLRQDIKNNHLEMDIPVSTLIKKI 993
Cdd:TIGR00618 506 LCGSCihpnpARQDIDNPGPL--TRRMQRGEQTYAQLETSEEDVYHQLTS----ERKQRASLKEQMQEIQQSFSILTQCD 579
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 994 DDLTA---KLETASSKCLHLGKKNQLLQQelllmrtiqKKCGKLEKNKKQLEQEVVNLRSHMEKNMVEHSQAQQ---YAR 1067
Cdd:TIGR00618 580 NRSKEdipNLQNITVRLQDLTEKLSEAED---------MLACEQHALLRKLQPEQDLQDVRLHLQQCSQELALKltaLHA 650
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 1068 EVEERARQDLVEKLKQVNLFLQAQAASQESLEQLRENSNASVRSQMElrikDLESQLYRMKAQEDfdkiELEKYKQLYQE 1147
Cdd:TIGR00618 651 LQLTLTQERVREHALSIRVLPKELLASRQLALQKMQSEKEQLTYWKE----MLAQCQTLLRELET----HIEEYDREFNE 722
|
650 660
....*....|....*....|....*.
gi 1907172253 1148 EFRARKSLSSKLNKTSEKLEEASSKL 1173
Cdd:TIGR00618 723 IENASSSLGSDLAAREDALNQSLKEL 748
|
|
| PLN02939 |
PLN02939 |
transferase, transferring glycosyl groups |
804-1177 |
9.96e-03 |
|
transferase, transferring glycosyl groups
Pssm-ID: 215507 [Multi-domain] Cd Length: 977 Bit Score: 40.27 E-value: 9.96e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 804 REVVVRQLQQELADTLKKQSMSEASLEVSSRYRSNLEEEARDLKKKLGQ--LRSQLQEARDQHREAVHHAEKMEDHLQKL 881
Cdd:PLN02939 40 RGFSSQQKKKRGKNIAPKQRSSNSKLQSNTDENGQLENTSLRTVMELPQksTSSDDDHNRASMQRDEAIAAIDNEQQTNS 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 882 ELEKSKFEITIKKQSEEIDQLQENLSRVNLSE-EDKEKLQKLTELKESLectvdqeQKRSSALEKELAEFKEVLKMTKKE 960
Cdd:PLN02939 120 KDGEQLSDFQLEDLVGMIQNAEKNILLLNQARlQALEDLEKILTEKEAL-------QGKINILEMRLSETDARIKLAAQE 192
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 961 LNEYENRE---LNLRQDIKNNHLEMDIPVSTLIKKIDDLtaKLETASSK--CLHLGKKNQLLQQELLLMRTIQKKCGKLE 1035
Cdd:PLN02939 193 KIHVEILEeqlEKLRNELLIRGATEGLCVHSLSKELDVL--KEENMLLKddIQFLKAELIEVAETEERVFKLEKERSLLD 270
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907172253 1036 KNKKQLEQEVVNLRSHMEKnmVEHSQAQQYAREVEERarQDLVEKLK----QVNLFLQAQAASQESLEQLRENSNASVRS 1111
Cdd:PLN02939 271 ASLRELESKFIVAQEDVSK--LSPLQYDCWWEKVENL--QDLLDRATnqveKAALVLDQNQDLRDKVDKLEASLKEANVS 346
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1907172253 1112 QMELRIKDLESQlyRMKA-QEDFDKI--ELEKYKQLYQEefrarksLSSKLNKTSEKLEEASSKLLLEE 1177
Cdd:PLN02939 347 KFSSYKVELLQQ--KLKLlEERLQASdhEIHSYIQLYQE-------SIKEFQDTLSKLKEESKKRSLEH 406
|
|
| |
