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Conserved domains on  [gi|1907130607|ref|XP_036017138|]
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zinc finger protein 474 isoform X1 [Mus musculus]

Protein Classification

C2HC-type zinc finger protein( domain architecture ID 10621545)

C2HC-type zinc finger protein similar to zinc finger protein 474 (ZNF474), a testis-specific zinc finger protein

CATH:  4.10.320.30
Gene Ontology:  GO:0008270
PubMed:  1280325|17210253|12665246
SCOP:  4003606

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
zf-C2HC_2 pfam13913
zinc-finger of a C2HC-type; This family contains a number of divergent C2H2 type zinc fingers.
 281-304 1.37e-08

zinc-finger of a C2HC-type; This family contains a number of divergent C2H2 type zinc fingers.


:

Pssm-ID: 464037  Cd Length: 25  Bit Score: 49.88  E-value: 1.37e-08
                          10        20
                  ....*....|....*....|....
gi 1907130607 281 LVPCPNCGRTFAVDRLPVHQRSCK 304
Cdd:pfam13913   2 LVPCPICGRTFNPDRLAKHEKICK 25
zf-C2HC_2 pfam13913
zinc-finger of a C2HC-type; This family contains a number of divergent C2H2 type zinc fingers.
 161-185 9.72e-08

zinc-finger of a C2HC-type; This family contains a number of divergent C2H2 type zinc fingers.


:

Pssm-ID: 464037  Cd Length: 25  Bit Score: 47.57  E-value: 9.72e-08
                          10        20
                  ....*....|....*....|....*
gi 1907130607 161 QLLPCENCGRTFLPDRLLVHQRSCK 185
Cdd:pfam13913   1 ELVPCPICGRTFNPDRLAKHEKICK 25
zf-C2HC_2 pfam13913
zinc-finger of a C2HC-type; This family contains a number of divergent C2H2 type zinc fingers.
 92-113 1.09e-04

zinc-finger of a C2HC-type; This family contains a number of divergent C2H2 type zinc fingers.


:

Pssm-ID: 464037  Cd Length: 25  Bit Score: 38.71  E-value: 1.09e-04
                          10        20
                  ....*....|....*....|..
gi 1907130607  92 RICYICGREFGSQSLAIHEPQC 113
Cdd:pfam13913   3 VPCPICGRTFNPDRLAKHEKIC 24
zf-C2HC_2 pfam13913
zinc-finger of a C2HC-type; This family contains a number of divergent C2H2 type zinc fingers.
 218-240 3.53e-04

zinc-finger of a C2HC-type; This family contains a number of divergent C2H2 type zinc fingers.


:

Pssm-ID: 464037  Cd Length: 25  Bit Score: 37.17  E-value: 3.53e-04
                          10        20
                  ....*....|....*....|...
gi 1907130607 218 TLICYICGREFGTLSLPIHEPKC 240
Cdd:pfam13913   2 LVPCPICGRTFNPDRLAKHEKIC 24
 
Name Accession Description Interval E-value
zf-C2HC_2 pfam13913
zinc-finger of a C2HC-type; This family contains a number of divergent C2H2 type zinc fingers.
 281-304 1.37e-08

zinc-finger of a C2HC-type; This family contains a number of divergent C2H2 type zinc fingers.


Pssm-ID: 464037  Cd Length: 25  Bit Score: 49.88  E-value: 1.37e-08
                          10        20
                  ....*....|....*....|....
gi 1907130607 281 LVPCPNCGRTFAVDRLPVHQRSCK 304
Cdd:pfam13913   2 LVPCPICGRTFNPDRLAKHEKICK 25
zf-C2HC_2 pfam13913
zinc-finger of a C2HC-type; This family contains a number of divergent C2H2 type zinc fingers.
 161-185 9.72e-08

zinc-finger of a C2HC-type; This family contains a number of divergent C2H2 type zinc fingers.


Pssm-ID: 464037  Cd Length: 25  Bit Score: 47.57  E-value: 9.72e-08
                          10        20
                  ....*....|....*....|....*
gi 1907130607 161 QLLPCENCGRTFLPDRLLVHQRSCK 185
Cdd:pfam13913   1 ELVPCPICGRTFNPDRLAKHEKICK 25
zf-C2HC_2 pfam13913
zinc-finger of a C2HC-type; This family contains a number of divergent C2H2 type zinc fingers.
 92-113 1.09e-04

zinc-finger of a C2HC-type; This family contains a number of divergent C2H2 type zinc fingers.


Pssm-ID: 464037  Cd Length: 25  Bit Score: 38.71  E-value: 1.09e-04
                          10        20
                  ....*....|....*....|..
gi 1907130607  92 RICYICGREFGSQSLAIHEPQC 113
Cdd:pfam13913   3 VPCPICGRTFNPDRLAKHEKIC 24
zf-C2HC_2 pfam13913
zinc-finger of a C2HC-type; This family contains a number of divergent C2H2 type zinc fingers.
 218-240 3.53e-04

zinc-finger of a C2HC-type; This family contains a number of divergent C2H2 type zinc fingers.


Pssm-ID: 464037  Cd Length: 25  Bit Score: 37.17  E-value: 3.53e-04
                          10        20
                  ....*....|....*....|...
gi 1907130607 218 TLICYICGREFGTLSLPIHEPKC 240
Cdd:pfam13913   2 LVPCPICGRTFNPDRLAKHEKIC 24
 
Name Accession Description Interval E-value
zf-C2HC_2 pfam13913
zinc-finger of a C2HC-type; This family contains a number of divergent C2H2 type zinc fingers.
 281-304 1.37e-08

zinc-finger of a C2HC-type; This family contains a number of divergent C2H2 type zinc fingers.


Pssm-ID: 464037  Cd Length: 25  Bit Score: 49.88  E-value: 1.37e-08
                          10        20
                  ....*....|....*....|....
gi 1907130607 281 LVPCPNCGRTFAVDRLPVHQRSCK 304
Cdd:pfam13913   2 LVPCPICGRTFNPDRLAKHEKICK 25
zf-C2HC_2 pfam13913
zinc-finger of a C2HC-type; This family contains a number of divergent C2H2 type zinc fingers.
 161-185 9.72e-08

zinc-finger of a C2HC-type; This family contains a number of divergent C2H2 type zinc fingers.


Pssm-ID: 464037  Cd Length: 25  Bit Score: 47.57  E-value: 9.72e-08
                          10        20
                  ....*....|....*....|....*
gi 1907130607 161 QLLPCENCGRTFLPDRLLVHQRSCK 185
Cdd:pfam13913   1 ELVPCPICGRTFNPDRLAKHEKICK 25
zf-C2HC_2 pfam13913
zinc-finger of a C2HC-type; This family contains a number of divergent C2H2 type zinc fingers.
 92-113 1.09e-04

zinc-finger of a C2HC-type; This family contains a number of divergent C2H2 type zinc fingers.


Pssm-ID: 464037  Cd Length: 25  Bit Score: 38.71  E-value: 1.09e-04
                          10        20
                  ....*....|....*....|..
gi 1907130607  92 RICYICGREFGSQSLAIHEPQC 113
Cdd:pfam13913   3 VPCPICGRTFNPDRLAKHEKIC 24
zf-C2HC_2 pfam13913
zinc-finger of a C2HC-type; This family contains a number of divergent C2H2 type zinc fingers.
 218-240 3.53e-04

zinc-finger of a C2HC-type; This family contains a number of divergent C2H2 type zinc fingers.


Pssm-ID: 464037  Cd Length: 25  Bit Score: 37.17  E-value: 3.53e-04
                          10        20
                  ....*....|....*....|...
gi 1907130607 218 TLICYICGREFGTLSLPIHEPKC 240
Cdd:pfam13913   2 LVPCPICGRTFNPDRLAKHEKIC 24
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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