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Conserved domains on  [gi|1907138394|ref|XP_036016938|]
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plakophilin-4 isoform X13 [Mus musculus]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Arm pfam00514
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form ...
 410-449 6.58e-09

Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form super-helix of helices that is proposed to mediate interaction of beta-catenin with its ligands. CAUTION: This family does not contain all known armadillo repeats.


:

Pssm-ID: 425727 [Multi-domain]  Cd Length: 41  Bit Score: 52.07  E-value: 6.58e-09
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|
gi 1907138394 410 DNKVKMEVYRLGGIKHLVDLLDHRVLEVQKNACGALRNLV 449
Cdd:pfam00514   1 SPENKQAVIEAGAVPPLVRLLSSPDEEVQEEAAWALSNLA 40
ARM smart00185
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form ...
 716-751 6.95e-07

Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin.


:

Pssm-ID: 214547 [Multi-domain]  Cd Length: 41  Bit Score: 46.27  E-value: 6.95e-07
                           10        20        30
                   ....*....|....*....|....*....|....*.
gi 1907138394  716 RAAVRKEKGLPILVELLRMDNDRVVSSVATALRNMA 751
Cdd:smart00185   5 KQAVVDAGGLPALVELLKSEDEEVVKEAAWALSNLS 40
ARM smart00185
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form ...
 454-495 7.45e-07

Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin.


:

Pssm-ID: 214547 [Multi-domain]  Cd Length: 41  Bit Score: 46.27  E-value: 7.45e-07
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|..
gi 1907138394  454 TDENKIAMKNVGGIPALLRLLRKSiDAEVRELVTGVLWNLSS 495
Cdd:smart00185   1 DDENKQAVVDAGGLPALVELLKSE-DEEVVKEAAWALSNLSS 41
PLN03209 super family cl25752
translocon at the inner envelope of chloroplast subunit 62; Provisional
 72-229 5.03e-04

translocon at the inner envelope of chloroplast subunit 62; Provisional


The actual alignment was detected with superfamily member PLN03209:

Pssm-ID: 178748 [Multi-domain]  Cd Length: 576  Bit Score: 43.76  E-value: 5.03e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907138394  72 SPSYVTSTGVSPSRGSLRTSlgsgfgspSVTDSRPLNPSAYSSSTLPA----------QRAASPY----------SQRPA 131
Cdd:PLN03209  385 SPIPTPPSSSPASSKSVDAV--------AKPAEPDVVPSPGSASNVPEvepaqveakkTRPLSPYaryedlkpptSPSPT 456

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907138394 132 SPTAVRRVGSVTSRQTSNPNGPVPQYQTTT--------RVGSPLTLTDAQTRVASPSQGQVGSSSPKRSGMTAVPQHLGP 203
Cdd:PLN03209  457 APTGVSPSVSSTSSVPAVPDTAPATAATDAaapppanmRPLSPYAVYDDLKPPTSPSPAAPVGKVAPSSTNEVVKVGNSA 536

                         170       180       190
                  ....*....|....*....|....*....|.
gi 1907138394 204 SLQRTVHDMDQFGQQQ-----YDIYERMVPP 229
Cdd:PLN03209  537 PPTALADEQHHAQPKPrplspYTMYEDLKPP 567
PLN03200 super family cl33659
cellulose synthase-interactive protein; Provisional
 699-820 1.34e-03

cellulose synthase-interactive protein; Provisional


The actual alignment was detected with superfamily member PLN03200:

Pssm-ID: 215629 [Multi-domain]  Cd Length: 2102  Bit Score: 42.78  E-value: 1.34e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907138394  699 GSLQNLSA---GNWkfAAYIRAAvrkekGLPILVELLRMDNDRVVSSVATALRNMAL---DVRNKeLIGKYAMRDLVNRL 772
Cdd:PLN03200   169 GALRNLCGstdGFW--SATLEAG-----GVDILVKLLSSGNSDAQANAASLLARLMMafeSSISK-VLDAGAVKQLLKLL 240

                           90       100       110       120
                   ....*....|....*....|....*....|....*....|....*...
gi 1907138394  773 PGGNGPSILsdetvAAICCALHEVTSKNMENAKALADSGGIEKLVNIT 820
Cdd:PLN03200   241 GQGNEVSVR-----AEAAGALEALSSQSKEAKQAIADAGGIPALINAT 283
ARM smart00185
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form ...
 800-844 5.12e-03

Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin.


:

Pssm-ID: 214547 [Multi-domain]  Cd Length: 41  Bit Score: 35.48  E-value: 5.12e-03
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*
gi 1907138394  800 NMENAKALADSGGIEKLVNITKgrgdRSSLKVVKAAAQVLNTLWQ 844
Cdd:smart00185   1 DDENKQAVVDAGGLPALVELLK----SEDEEVVKEAAWALSNLSS 41
 
Name Accession Description Interval E-value
Arm pfam00514
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form ...
 410-449 6.58e-09

Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form super-helix of helices that is proposed to mediate interaction of beta-catenin with its ligands. CAUTION: This family does not contain all known armadillo repeats.


Pssm-ID: 425727 [Multi-domain]  Cd Length: 41  Bit Score: 52.07  E-value: 6.58e-09
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|
gi 1907138394 410 DNKVKMEVYRLGGIKHLVDLLDHRVLEVQKNACGALRNLV 449
Cdd:pfam00514   1 SPENKQAVIEAGAVPPLVRLLSSPDEEVQEEAAWALSNLA 40
ARM smart00185
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form ...
 410-450 1.33e-08

Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin.


Pssm-ID: 214547 [Multi-domain]  Cd Length: 41  Bit Score: 51.28  E-value: 1.33e-08
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|.
gi 1907138394  410 DNKVKMEVYRLGGIKHLVDLLDHRVLEVQKNACGALRNLVF 450
Cdd:smart00185   1 DDENKQAVVDAGGLPALVELLKSEDEEVVKEAAWALSNLSS 41
ARM smart00185
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form ...
 716-751 6.95e-07

Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin.


Pssm-ID: 214547 [Multi-domain]  Cd Length: 41  Bit Score: 46.27  E-value: 6.95e-07
                           10        20        30
                   ....*....|....*....|....*....|....*.
gi 1907138394  716 RAAVRKEKGLPILVELLRMDNDRVVSSVATALRNMA 751
Cdd:smart00185   5 KQAVVDAGGLPALVELLKSEDEEVVKEAAWALSNLS 40
ARM smart00185
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form ...
 454-495 7.45e-07

Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin.


Pssm-ID: 214547 [Multi-domain]  Cd Length: 41  Bit Score: 46.27  E-value: 7.45e-07
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|..
gi 1907138394  454 TDENKIAMKNVGGIPALLRLLRKSiDAEVRELVTGVLWNLSS 495
Cdd:smart00185   1 DDENKQAVVDAGGLPALVELLKSE-DEEVVKEAAWALSNLSS 41
Arm pfam00514
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form ...
 454-495 2.62e-06

Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form super-helix of helices that is proposed to mediate interaction of beta-catenin with its ligands. CAUTION: This family does not contain all known armadillo repeats.


Pssm-ID: 425727 [Multi-domain]  Cd Length: 41  Bit Score: 44.75  E-value: 2.62e-06
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|..
gi 1907138394 454 TDENKIAMKNVGGIPALLRLLrKSIDAEVRELVTGVLWNLSS 495
Cdd:pfam00514   1 SPENKQAVIEAGAVPPLVRLL-SSPDEEVQEEAAWALSNLAA 41
Arm pfam00514
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form ...
 716-751 2.87e-04

Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form super-helix of helices that is proposed to mediate interaction of beta-catenin with its ligands. CAUTION: This family does not contain all known armadillo repeats.


Pssm-ID: 425727 [Multi-domain]  Cd Length: 41  Bit Score: 38.97  E-value: 2.87e-04
                          10        20        30
                  ....*....|....*....|....*....|....*.
gi 1907138394 716 RAAVRKEKGLPILVELLRMDNDRVVSSVATALRNMA 751
Cdd:pfam00514   5 KQAVIEAGAVPPLVRLLSSPDEEVQEEAAWALSNLA 40
HEAT COG1413
HEAT repeat [General function prediction only];
377-499 3.76e-04

HEAT repeat [General function prediction only];


Pssm-ID: 441023 [Multi-domain]  Cd Length: 137  Bit Score: 41.54  E-value: 3.76e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907138394 377 RDPE-LPEVIHMLQHQFPSVQANAAAYLQHLcfGDNKVkmevyrlggIKHLVDLLDHRVLEVQKNACGALRNLvfgkstd 455
Cdd:COG1413    13 GDPAaVPALIAALADEDPDVRAAAARALGRL--GDPRA---------VPALLEALKDPDPEVRAAAAEALGRI------- 74

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....
gi 1907138394 456 enkiamKNVGGIPALLRLLrKSIDAEVRELVTGVLWNLSSCDAV 499
Cdd:COG1413    75 ------GDPEAVPALIAAL-KDEDPEVRRAAAEALGRLGDPAAV 111
PLN03209 PLN03209
translocon at the inner envelope of chloroplast subunit 62; Provisional
 72-229 5.03e-04

translocon at the inner envelope of chloroplast subunit 62; Provisional


Pssm-ID: 178748 [Multi-domain]  Cd Length: 576  Bit Score: 43.76  E-value: 5.03e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907138394  72 SPSYVTSTGVSPSRGSLRTSlgsgfgspSVTDSRPLNPSAYSSSTLPA----------QRAASPY----------SQRPA 131
Cdd:PLN03209  385 SPIPTPPSSSPASSKSVDAV--------AKPAEPDVVPSPGSASNVPEvepaqveakkTRPLSPYaryedlkpptSPSPT 456

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907138394 132 SPTAVRRVGSVTSRQTSNPNGPVPQYQTTT--------RVGSPLTLTDAQTRVASPSQGQVGSSSPKRSGMTAVPQHLGP 203
Cdd:PLN03209  457 APTGVSPSVSSTSSVPAVPDTAPATAATDAaapppanmRPLSPYAVYDDLKPPTSPSPAAPVGKVAPSSTNEVVKVGNSA 536

                         170       180       190
                  ....*....|....*....|....*....|.
gi 1907138394 204 SLQRTVHDMDQFGQQQ-----YDIYERMVPP 229
Cdd:PLN03209  537 PPTALADEQHHAQPKPrplspYTMYEDLKPP 567
PLN03200 PLN03200
cellulose synthase-interactive protein; Provisional
 699-820 1.34e-03

cellulose synthase-interactive protein; Provisional


Pssm-ID: 215629 [Multi-domain]  Cd Length: 2102  Bit Score: 42.78  E-value: 1.34e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907138394  699 GSLQNLSA---GNWkfAAYIRAAvrkekGLPILVELLRMDNDRVVSSVATALRNMAL---DVRNKeLIGKYAMRDLVNRL 772
Cdd:PLN03200   169 GALRNLCGstdGFW--SATLEAG-----GVDILVKLLSSGNSDAQANAASLLARLMMafeSSISK-VLDAGAVKQLLKLL 240

                           90       100       110       120
                   ....*....|....*....|....*....|....*....|....*...
gi 1907138394  773 PGGNGPSILsdetvAAICCALHEVTSKNMENAKALADSGGIEKLVNIT 820
Cdd:PLN03200   241 GQGNEVSVR-----AEAAGALEALSSQSKEAKQAIADAGGIPALINAT 283
ARM smart00185
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form ...
 800-844 5.12e-03

Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin.


Pssm-ID: 214547 [Multi-domain]  Cd Length: 41  Bit Score: 35.48  E-value: 5.12e-03
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*
gi 1907138394  800 NMENAKALADSGGIEKLVNITKgrgdRSSLKVVKAAAQVLNTLWQ 844
Cdd:smart00185   1 DDENKQAVVDAGGLPALVELLK----SEDEEVVKEAAWALSNLSS 41
PLN03200 PLN03200
cellulose synthase-interactive protein; Provisional
 381-495 6.59e-03

cellulose synthase-interactive protein; Provisional


Pssm-ID: 215629 [Multi-domain]  Cd Length: 2102  Bit Score: 40.47  E-value: 6.59e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907138394  381 LPEVIHMLQHQFPSVQANAAAYLQHLCfGDNKVKMEVYrLGG-IKHLVDLLDHRVLEVQKNACGALRNLVFGKSTDEnkI 459
Cdd:PLN03200    60 MPLLVSLLRSGTLGAKVNAAAVLGVLC-KEEDLRVKVL-LGGcIPPLLSLLKSGSAEAQKAAAEAIYAVSSGGLSDH--V 135

                           90       100       110       120
                   ....*....|....*....|....*....|....*....|.
gi 1907138394  460 AMK---NVGGIPALLRLL--RKSIDAEVRELVTGVLWNLSS 495
Cdd:PLN03200   136 GSKifsTEGVVPSLWDQLqpGNKQDKVVEGLLTGALRNLCG 176
 
Name Accession Description Interval E-value
Arm pfam00514
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form ...
 410-449 6.58e-09

Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form super-helix of helices that is proposed to mediate interaction of beta-catenin with its ligands. CAUTION: This family does not contain all known armadillo repeats.


Pssm-ID: 425727 [Multi-domain]  Cd Length: 41  Bit Score: 52.07  E-value: 6.58e-09
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|
gi 1907138394 410 DNKVKMEVYRLGGIKHLVDLLDHRVLEVQKNACGALRNLV 449
Cdd:pfam00514   1 SPENKQAVIEAGAVPPLVRLLSSPDEEVQEEAAWALSNLA 40
ARM smart00185
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form ...
 410-450 1.33e-08

Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin.


Pssm-ID: 214547 [Multi-domain]  Cd Length: 41  Bit Score: 51.28  E-value: 1.33e-08
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|.
gi 1907138394  410 DNKVKMEVYRLGGIKHLVDLLDHRVLEVQKNACGALRNLVF 450
Cdd:smart00185   1 DDENKQAVVDAGGLPALVELLKSEDEEVVKEAAWALSNLSS 41
ARM smart00185
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form ...
 716-751 6.95e-07

Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin.


Pssm-ID: 214547 [Multi-domain]  Cd Length: 41  Bit Score: 46.27  E-value: 6.95e-07
                           10        20        30
                   ....*....|....*....|....*....|....*.
gi 1907138394  716 RAAVRKEKGLPILVELLRMDNDRVVSSVATALRNMA 751
Cdd:smart00185   5 KQAVVDAGGLPALVELLKSEDEEVVKEAAWALSNLS 40
ARM smart00185
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form ...
 454-495 7.45e-07

Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin.


Pssm-ID: 214547 [Multi-domain]  Cd Length: 41  Bit Score: 46.27  E-value: 7.45e-07
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|..
gi 1907138394  454 TDENKIAMKNVGGIPALLRLLRKSiDAEVRELVTGVLWNLSS 495
Cdd:smart00185   1 DDENKQAVVDAGGLPALVELLKSE-DEEVVKEAAWALSNLSS 41
Arm pfam00514
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form ...
 454-495 2.62e-06

Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form super-helix of helices that is proposed to mediate interaction of beta-catenin with its ligands. CAUTION: This family does not contain all known armadillo repeats.


Pssm-ID: 425727 [Multi-domain]  Cd Length: 41  Bit Score: 44.75  E-value: 2.62e-06
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|..
gi 1907138394 454 TDENKIAMKNVGGIPALLRLLrKSIDAEVRELVTGVLWNLSS 495
Cdd:pfam00514   1 SPENKQAVIEAGAVPPLVRLL-SSPDEEVQEEAAWALSNLAA 41
Arm pfam00514
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form ...
 716-751 2.87e-04

Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form super-helix of helices that is proposed to mediate interaction of beta-catenin with its ligands. CAUTION: This family does not contain all known armadillo repeats.


Pssm-ID: 425727 [Multi-domain]  Cd Length: 41  Bit Score: 38.97  E-value: 2.87e-04
                          10        20        30
                  ....*....|....*....|....*....|....*.
gi 1907138394 716 RAAVRKEKGLPILVELLRMDNDRVVSSVATALRNMA 751
Cdd:pfam00514   5 KQAVIEAGAVPPLVRLLSSPDEEVQEEAAWALSNLA 40
HEAT COG1413
HEAT repeat [General function prediction only];
377-499 3.76e-04

HEAT repeat [General function prediction only];


Pssm-ID: 441023 [Multi-domain]  Cd Length: 137  Bit Score: 41.54  E-value: 3.76e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907138394 377 RDPE-LPEVIHMLQHQFPSVQANAAAYLQHLcfGDNKVkmevyrlggIKHLVDLLDHRVLEVQKNACGALRNLvfgkstd 455
Cdd:COG1413    13 GDPAaVPALIAALADEDPDVRAAAARALGRL--GDPRA---------VPALLEALKDPDPEVRAAAAEALGRI------- 74

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....
gi 1907138394 456 enkiamKNVGGIPALLRLLrKSIDAEVRELVTGVLWNLSSCDAV 499
Cdd:COG1413    75 ------GDPEAVPALIAAL-KDEDPEVRRAAAEALGRLGDPAAV 111
PLN03209 PLN03209
translocon at the inner envelope of chloroplast subunit 62; Provisional
 72-229 5.03e-04

translocon at the inner envelope of chloroplast subunit 62; Provisional


Pssm-ID: 178748 [Multi-domain]  Cd Length: 576  Bit Score: 43.76  E-value: 5.03e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907138394  72 SPSYVTSTGVSPSRGSLRTSlgsgfgspSVTDSRPLNPSAYSSSTLPA----------QRAASPY----------SQRPA 131
Cdd:PLN03209  385 SPIPTPPSSSPASSKSVDAV--------AKPAEPDVVPSPGSASNVPEvepaqveakkTRPLSPYaryedlkpptSPSPT 456

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907138394 132 SPTAVRRVGSVTSRQTSNPNGPVPQYQTTT--------RVGSPLTLTDAQTRVASPSQGQVGSSSPKRSGMTAVPQHLGP 203
Cdd:PLN03209  457 APTGVSPSVSSTSSVPAVPDTAPATAATDAaapppanmRPLSPYAVYDDLKPPTSPSPAAPVGKVAPSSTNEVVKVGNSA 536

                         170       180       190
                  ....*....|....*....|....*....|.
gi 1907138394 204 SLQRTVHDMDQFGQQQ-----YDIYERMVPP 229
Cdd:PLN03209  537 PPTALADEQHHAQPKPrplspYTMYEDLKPP 567
PLN03200 PLN03200
cellulose synthase-interactive protein; Provisional
 699-820 1.34e-03

cellulose synthase-interactive protein; Provisional


Pssm-ID: 215629 [Multi-domain]  Cd Length: 2102  Bit Score: 42.78  E-value: 1.34e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907138394  699 GSLQNLSA---GNWkfAAYIRAAvrkekGLPILVELLRMDNDRVVSSVATALRNMAL---DVRNKeLIGKYAMRDLVNRL 772
Cdd:PLN03200   169 GALRNLCGstdGFW--SATLEAG-----GVDILVKLLSSGNSDAQANAASLLARLMMafeSSISK-VLDAGAVKQLLKLL 240

                           90       100       110       120
                   ....*....|....*....|....*....|....*....|....*...
gi 1907138394  773 PGGNGPSILsdetvAAICCALHEVTSKNMENAKALADSGGIEKLVNIT 820
Cdd:PLN03200   241 GQGNEVSVR-----AEAAGALEALSSQSKEAKQAIADAGGIPALINAT 283
ARM smart00185
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form ...
 800-844 5.12e-03

Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin.


Pssm-ID: 214547 [Multi-domain]  Cd Length: 41  Bit Score: 35.48  E-value: 5.12e-03
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*
gi 1907138394  800 NMENAKALADSGGIEKLVNITKgrgdRSSLKVVKAAAQVLNTLWQ 844
Cdd:smart00185   1 DDENKQAVVDAGGLPALVELLK----SEDEEVVKEAAWALSNLSS 41
PLN03200 PLN03200
cellulose synthase-interactive protein; Provisional
 381-495 6.59e-03

cellulose synthase-interactive protein; Provisional


Pssm-ID: 215629 [Multi-domain]  Cd Length: 2102  Bit Score: 40.47  E-value: 6.59e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907138394  381 LPEVIHMLQHQFPSVQANAAAYLQHLCfGDNKVKMEVYrLGG-IKHLVDLLDHRVLEVQKNACGALRNLVFGKSTDEnkI 459
Cdd:PLN03200    60 MPLLVSLLRSGTLGAKVNAAAVLGVLC-KEEDLRVKVL-LGGcIPPLLSLLKSGSAEAQKAAAEAIYAVSSGGLSDH--V 135

                           90       100       110       120
                   ....*....|....*....|....*....|....*....|.
gi 1907138394  460 AMK---NVGGIPALLRLL--RKSIDAEVRELVTGVLWNLSS 495
Cdd:PLN03200   136 GSKifsTEGVVPSLWDQLqpGNKQDKVVEGLLTGALRNLCG 176
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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