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Conserved domains on  [gi|1907080307|ref|XP_036012276|]
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microtubule-associated protein tau isoform X6 [Mus musculus]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Tubulin-binding pfam00418
Tau and MAP protein, tubulin-binding repeat; This family includes the vertebrate proteins MAP2, ...
 535-564 1.03e-14

Tau and MAP protein, tubulin-binding repeat; This family includes the vertebrate proteins MAP2, MAP4 and Tau, as well as other animal homologs. MAP4 is present in many tissues but is usually absent from neurons; MAP2 and Tau are mainly neuronal. Members of this family have the ability to bind to and stabilize microtubules. As a result, they are involved in neuronal migration, supporting dendrite elongation, and regulating microtubules during mitotic metaphase. Note that Tau is involved in neurofibrillary tangle formation in Alzheimer's disease and some other dementias. This family features a C-terminal microtubule binding repeat that contains a conserved KXGS motif.


:

Pssm-ID: 459807 [Multi-domain]  Cd Length: 30  Bit Score: 68.21  E-value: 1.03e-14
                          10        20        30
                  ....*....|....*....|....*....|
gi 1907080307 535 VQIINKKLDLSNVQSKCGSKDNIKHVPGGG 564
Cdd:pfam00418   1 VKIESKKLDFSKVQSKCGSKDNIKHKPGGG 30
Tubulin-binding pfam00418
Tau and MAP protein, tubulin-binding repeat; This family includes the vertebrate proteins MAP2, ...
 566-595 7.09e-11

Tau and MAP protein, tubulin-binding repeat; This family includes the vertebrate proteins MAP2, MAP4 and Tau, as well as other animal homologs. MAP4 is present in many tissues but is usually absent from neurons; MAP2 and Tau are mainly neuronal. Members of this family have the ability to bind to and stabilize microtubules. As a result, they are involved in neuronal migration, supporting dendrite elongation, and regulating microtubules during mitotic metaphase. Note that Tau is involved in neurofibrillary tangle formation in Alzheimer's disease and some other dementias. This family features a C-terminal microtubule binding repeat that contains a conserved KXGS motif.


:

Pssm-ID: 459807 [Multi-domain]  Cd Length: 30  Bit Score: 57.04  E-value: 7.09e-11
                          10        20        30
                  ....*....|....*....|....*....|
gi 1907080307 566 VQIVYKPVDLSKVTSKCGSLGNIHHKPGGG 595
Cdd:pfam00418   1 VKIESKKLDFSKVQSKCGSKDNIKHKPGGG 30
Tubulin-binding pfam00418
Tau and MAP protein, tubulin-binding repeat; This family includes the vertebrate proteins MAP2, ...
 597-627 4.67e-10

Tau and MAP protein, tubulin-binding repeat; This family includes the vertebrate proteins MAP2, MAP4 and Tau, as well as other animal homologs. MAP4 is present in many tissues but is usually absent from neurons; MAP2 and Tau are mainly neuronal. Members of this family have the ability to bind to and stabilize microtubules. As a result, they are involved in neuronal migration, supporting dendrite elongation, and regulating microtubules during mitotic metaphase. Note that Tau is involved in neurofibrillary tangle formation in Alzheimer's disease and some other dementias. This family features a C-terminal microtubule binding repeat that contains a conserved KXGS motif.


:

Pssm-ID: 459807 [Multi-domain]  Cd Length: 30  Bit Score: 54.72  E-value: 4.67e-10
                          10        20        30
                  ....*....|....*....|....*....|.
gi 1907080307 597 VEVKSEKLDFKdRVQSKIGSLDNITHVPGGG 627
Cdd:pfam00418   1 VKIESKKLDFS-KVQSKCGSKDNIKHKPGGG 30
Tubulin-binding pfam00418
Tau and MAP protein, tubulin-binding repeat; This family includes the vertebrate proteins MAP2, ...
 512-533 1.95e-07

Tau and MAP protein, tubulin-binding repeat; This family includes the vertebrate proteins MAP2, MAP4 and Tau, as well as other animal homologs. MAP4 is present in many tissues but is usually absent from neurons; MAP2 and Tau are mainly neuronal. Members of this family have the ability to bind to and stabilize microtubules. As a result, they are involved in neuronal migration, supporting dendrite elongation, and regulating microtubules during mitotic metaphase. Note that Tau is involved in neurofibrillary tangle formation in Alzheimer's disease and some other dementias. This family features a C-terminal microtubule binding repeat that contains a conserved KXGS motif.


:

Pssm-ID: 459807 [Multi-domain]  Cd Length: 30  Bit Score: 47.41  E-value: 1.95e-07
                          10        20
                  ....*....|....*....|..
gi 1907080307 512 DLKNVRSKIGSTENLKHQPGGG 533
Cdd:pfam00418   9 DFSKVQSKCGSKDNIKHKPGGG 30
PHA03247 super family cl33720
large tegument protein UL36; Provisional
 216-514 4.48e-07

large tegument protein UL36; Provisional


The actual alignment was detected with superfamily member PHA03247:

Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 53.79  E-value: 4.48e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080307  216 ESSQDSPPSQASltpgRAAPQAGSGSVCGETASVPGLPTEGSVPLPAdfFSKVSAETQASQPEGPGTGPMEEGHEAAPEF 295
Cdd:PHA03247  2586 ARRPDAPPQSAR----PRAPVDDRGDPRGPAPPSPLPPDTHAPDPPP--PSPSPAANEPDPHPPPTVPPPERPRDDPAPG 2659

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080307  296 TFHVEIKASTPKEqdlegATVVGVPGEEQKAQTQGPSVGKGTKEASLQEP---PGKQPAAGLPGRPVSRVPQlkarvask 372
Cdd:PHA03247  2660 RVSRPRRARRLGR-----AAQASSPPQRPRRRAARPTVGSLTSLADPPPPpptPEPAPHALVSATPLPPGPA-------- 2726

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080307  373 drtgndekKAKGADGKTGAKIATPRGAASPAQKGTSNATRIPAKT-TPSPKTPPGSASKQPQRKLPPAGAKSERGE---- 447
Cdd:PHA03247  2727 --------AARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTaGPPAPAPPAAPAAGPPRRLTRPAVASLSESresl 2798

                          250       260       270       280       290       300
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1907080307  448 --PPKSGERSGYSSPGSPGTPGSRSRTPSLPTPPTREPkkvaVVRTPPKSPSASKSRLQTAPVPMPDLK 514
Cdd:PHA03247  2799 psPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQP----TAPPPPPGPPPPSLPLGGSVAPGGDVR 2863
LGT super family cl00478
Prolipoprotein diacylglyceryl transferase;
41-205 2.19e-03

Prolipoprotein diacylglyceryl transferase;


The actual alignment was detected with superfamily member PRK13108:

Pssm-ID: 469786 [Multi-domain]  Cd Length: 460  Bit Score: 41.12  E-value: 2.19e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080307  41 ADDGAEEPGSETSDAKSTPTAEDVTAPlVDERAPDK-----QAAAQPHTEIPEGITAEEAGIGDTPNQEDQAAGHVTQEP 115
Cdd:PRK13108  291 VVDEALEREPAELAAAAVASAASAVGP-VGPGEPNQpddvaEAVKAEVAEVTDEVAAESVVQVADRDGESTPAVEETSEA 369

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080307 116 EKVEifsqsllVEPGRREGQAPDLGTSDWTRQqvssmSGAPLLPQGlrEATCQPSGTRPEDIEKSHPASELLRRGPPQKE 195
Cdd:PRK13108  370 DIER-------EQPGDLAGQAPAAHQVDAEAA-----SAAPEEPAA--LASEAHDETEPEVPEKAAPIPDPAKPDELAVA 435

                         170
                  ....*....|
gi 1907080307 196 GWGQDRLGSE 205
Cdd:PRK13108  436 GPGDDPAEPD 445
 
Name Accession Description Interval E-value
Tubulin-binding pfam00418
Tau and MAP protein, tubulin-binding repeat; This family includes the vertebrate proteins MAP2, ...
 535-564 1.03e-14

Tau and MAP protein, tubulin-binding repeat; This family includes the vertebrate proteins MAP2, MAP4 and Tau, as well as other animal homologs. MAP4 is present in many tissues but is usually absent from neurons; MAP2 and Tau are mainly neuronal. Members of this family have the ability to bind to and stabilize microtubules. As a result, they are involved in neuronal migration, supporting dendrite elongation, and regulating microtubules during mitotic metaphase. Note that Tau is involved in neurofibrillary tangle formation in Alzheimer's disease and some other dementias. This family features a C-terminal microtubule binding repeat that contains a conserved KXGS motif.


Pssm-ID: 459807 [Multi-domain]  Cd Length: 30  Bit Score: 68.21  E-value: 1.03e-14
                          10        20        30
                  ....*....|....*....|....*....|
gi 1907080307 535 VQIINKKLDLSNVQSKCGSKDNIKHVPGGG 564
Cdd:pfam00418   1 VKIESKKLDFSKVQSKCGSKDNIKHKPGGG 30
Tubulin-binding pfam00418
Tau and MAP protein, tubulin-binding repeat; This family includes the vertebrate proteins MAP2, ...
 566-595 7.09e-11

Tau and MAP protein, tubulin-binding repeat; This family includes the vertebrate proteins MAP2, MAP4 and Tau, as well as other animal homologs. MAP4 is present in many tissues but is usually absent from neurons; MAP2 and Tau are mainly neuronal. Members of this family have the ability to bind to and stabilize microtubules. As a result, they are involved in neuronal migration, supporting dendrite elongation, and regulating microtubules during mitotic metaphase. Note that Tau is involved in neurofibrillary tangle formation in Alzheimer's disease and some other dementias. This family features a C-terminal microtubule binding repeat that contains a conserved KXGS motif.


Pssm-ID: 459807 [Multi-domain]  Cd Length: 30  Bit Score: 57.04  E-value: 7.09e-11
                          10        20        30
                  ....*....|....*....|....*....|
gi 1907080307 566 VQIVYKPVDLSKVTSKCGSLGNIHHKPGGG 595
Cdd:pfam00418   1 VKIESKKLDFSKVQSKCGSKDNIKHKPGGG 30
Tubulin-binding pfam00418
Tau and MAP protein, tubulin-binding repeat; This family includes the vertebrate proteins MAP2, ...
 597-627 4.67e-10

Tau and MAP protein, tubulin-binding repeat; This family includes the vertebrate proteins MAP2, MAP4 and Tau, as well as other animal homologs. MAP4 is present in many tissues but is usually absent from neurons; MAP2 and Tau are mainly neuronal. Members of this family have the ability to bind to and stabilize microtubules. As a result, they are involved in neuronal migration, supporting dendrite elongation, and regulating microtubules during mitotic metaphase. Note that Tau is involved in neurofibrillary tangle formation in Alzheimer's disease and some other dementias. This family features a C-terminal microtubule binding repeat that contains a conserved KXGS motif.


Pssm-ID: 459807 [Multi-domain]  Cd Length: 30  Bit Score: 54.72  E-value: 4.67e-10
                          10        20        30
                  ....*....|....*....|....*....|.
gi 1907080307 597 VEVKSEKLDFKdRVQSKIGSLDNITHVPGGG 627
Cdd:pfam00418   1 VKIESKKLDFS-KVQSKCGSKDNIKHKPGGG 30
Tubulin-binding pfam00418
Tau and MAP protein, tubulin-binding repeat; This family includes the vertebrate proteins MAP2, ...
 512-533 1.95e-07

Tau and MAP protein, tubulin-binding repeat; This family includes the vertebrate proteins MAP2, MAP4 and Tau, as well as other animal homologs. MAP4 is present in many tissues but is usually absent from neurons; MAP2 and Tau are mainly neuronal. Members of this family have the ability to bind to and stabilize microtubules. As a result, they are involved in neuronal migration, supporting dendrite elongation, and regulating microtubules during mitotic metaphase. Note that Tau is involved in neurofibrillary tangle formation in Alzheimer's disease and some other dementias. This family features a C-terminal microtubule binding repeat that contains a conserved KXGS motif.


Pssm-ID: 459807 [Multi-domain]  Cd Length: 30  Bit Score: 47.41  E-value: 1.95e-07
                          10        20
                  ....*....|....*....|..
gi 1907080307 512 DLKNVRSKIGSTENLKHQPGGG 533
Cdd:pfam00418   9 DFSKVQSKCGSKDNIKHKPGGG 30
PHA03247 PHA03247
large tegument protein UL36; Provisional
 216-514 4.48e-07

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 53.79  E-value: 4.48e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080307  216 ESSQDSPPSQASltpgRAAPQAGSGSVCGETASVPGLPTEGSVPLPAdfFSKVSAETQASQPEGPGTGPMEEGHEAAPEF 295
Cdd:PHA03247  2586 ARRPDAPPQSAR----PRAPVDDRGDPRGPAPPSPLPPDTHAPDPPP--PSPSPAANEPDPHPPPTVPPPERPRDDPAPG 2659

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080307  296 TFHVEIKASTPKEqdlegATVVGVPGEEQKAQTQGPSVGKGTKEASLQEP---PGKQPAAGLPGRPVSRVPQlkarvask 372
Cdd:PHA03247  2660 RVSRPRRARRLGR-----AAQASSPPQRPRRRAARPTVGSLTSLADPPPPpptPEPAPHALVSATPLPPGPA-------- 2726

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080307  373 drtgndekKAKGADGKTGAKIATPRGAASPAQKGTSNATRIPAKT-TPSPKTPPGSASKQPQRKLPPAGAKSERGE---- 447
Cdd:PHA03247  2727 --------AARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTaGPPAPAPPAAPAAGPPRRLTRPAVASLSESresl 2798

                          250       260       270       280       290       300
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1907080307  448 --PPKSGERSGYSSPGSPGTPGSRSRTPSLPTPPTREPkkvaVVRTPPKSPSASKSRLQTAPVPMPDLK 514
Cdd:PHA03247  2799 psPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQP----TAPPPPPGPPPPSLPLGGSVAPGGDVR 2863
PRK13108 PRK13108
prolipoprotein diacylglyceryl transferase; Reviewed
 41-205 2.19e-03

prolipoprotein diacylglyceryl transferase; Reviewed


Pssm-ID: 237284 [Multi-domain]  Cd Length: 460  Bit Score: 41.12  E-value: 2.19e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080307  41 ADDGAEEPGSETSDAKSTPTAEDVTAPlVDERAPDK-----QAAAQPHTEIPEGITAEEAGIGDTPNQEDQAAGHVTQEP 115
Cdd:PRK13108  291 VVDEALEREPAELAAAAVASAASAVGP-VGPGEPNQpddvaEAVKAEVAEVTDEVAAESVVQVADRDGESTPAVEETSEA 369

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080307 116 EKVEifsqsllVEPGRREGQAPDLGTSDWTRQqvssmSGAPLLPQGlrEATCQPSGTRPEDIEKSHPASELLRRGPPQKE 195
Cdd:PRK13108  370 DIER-------EQPGDLAGQAPAAHQVDAEAA-----SAAPEEPAA--LASEAHDETEPEVPEKAAPIPDPAKPDELAVA 435

                         170
                  ....*....|
gi 1907080307 196 GWGQDRLGSE 205
Cdd:PRK13108  436 GPGDDPAEPD 445
 
Name Accession Description Interval E-value
Tubulin-binding pfam00418
Tau and MAP protein, tubulin-binding repeat; This family includes the vertebrate proteins MAP2, ...
 535-564 1.03e-14

Tau and MAP protein, tubulin-binding repeat; This family includes the vertebrate proteins MAP2, MAP4 and Tau, as well as other animal homologs. MAP4 is present in many tissues but is usually absent from neurons; MAP2 and Tau are mainly neuronal. Members of this family have the ability to bind to and stabilize microtubules. As a result, they are involved in neuronal migration, supporting dendrite elongation, and regulating microtubules during mitotic metaphase. Note that Tau is involved in neurofibrillary tangle formation in Alzheimer's disease and some other dementias. This family features a C-terminal microtubule binding repeat that contains a conserved KXGS motif.


Pssm-ID: 459807 [Multi-domain]  Cd Length: 30  Bit Score: 68.21  E-value: 1.03e-14
                          10        20        30
                  ....*....|....*....|....*....|
gi 1907080307 535 VQIINKKLDLSNVQSKCGSKDNIKHVPGGG 564
Cdd:pfam00418   1 VKIESKKLDFSKVQSKCGSKDNIKHKPGGG 30
Tubulin-binding pfam00418
Tau and MAP protein, tubulin-binding repeat; This family includes the vertebrate proteins MAP2, ...
 566-595 7.09e-11

Tau and MAP protein, tubulin-binding repeat; This family includes the vertebrate proteins MAP2, MAP4 and Tau, as well as other animal homologs. MAP4 is present in many tissues but is usually absent from neurons; MAP2 and Tau are mainly neuronal. Members of this family have the ability to bind to and stabilize microtubules. As a result, they are involved in neuronal migration, supporting dendrite elongation, and regulating microtubules during mitotic metaphase. Note that Tau is involved in neurofibrillary tangle formation in Alzheimer's disease and some other dementias. This family features a C-terminal microtubule binding repeat that contains a conserved KXGS motif.


Pssm-ID: 459807 [Multi-domain]  Cd Length: 30  Bit Score: 57.04  E-value: 7.09e-11
                          10        20        30
                  ....*....|....*....|....*....|
gi 1907080307 566 VQIVYKPVDLSKVTSKCGSLGNIHHKPGGG 595
Cdd:pfam00418   1 VKIESKKLDFSKVQSKCGSKDNIKHKPGGG 30
Tubulin-binding pfam00418
Tau and MAP protein, tubulin-binding repeat; This family includes the vertebrate proteins MAP2, ...
 597-627 4.67e-10

Tau and MAP protein, tubulin-binding repeat; This family includes the vertebrate proteins MAP2, MAP4 and Tau, as well as other animal homologs. MAP4 is present in many tissues but is usually absent from neurons; MAP2 and Tau are mainly neuronal. Members of this family have the ability to bind to and stabilize microtubules. As a result, they are involved in neuronal migration, supporting dendrite elongation, and regulating microtubules during mitotic metaphase. Note that Tau is involved in neurofibrillary tangle formation in Alzheimer's disease and some other dementias. This family features a C-terminal microtubule binding repeat that contains a conserved KXGS motif.


Pssm-ID: 459807 [Multi-domain]  Cd Length: 30  Bit Score: 54.72  E-value: 4.67e-10
                          10        20        30
                  ....*....|....*....|....*....|.
gi 1907080307 597 VEVKSEKLDFKdRVQSKIGSLDNITHVPGGG 627
Cdd:pfam00418   1 VKIESKKLDFS-KVQSKCGSKDNIKHKPGGG 30
Tubulin-binding pfam00418
Tau and MAP protein, tubulin-binding repeat; This family includes the vertebrate proteins MAP2, ...
 512-533 1.95e-07

Tau and MAP protein, tubulin-binding repeat; This family includes the vertebrate proteins MAP2, MAP4 and Tau, as well as other animal homologs. MAP4 is present in many tissues but is usually absent from neurons; MAP2 and Tau are mainly neuronal. Members of this family have the ability to bind to and stabilize microtubules. As a result, they are involved in neuronal migration, supporting dendrite elongation, and regulating microtubules during mitotic metaphase. Note that Tau is involved in neurofibrillary tangle formation in Alzheimer's disease and some other dementias. This family features a C-terminal microtubule binding repeat that contains a conserved KXGS motif.


Pssm-ID: 459807 [Multi-domain]  Cd Length: 30  Bit Score: 47.41  E-value: 1.95e-07
                          10        20
                  ....*....|....*....|..
gi 1907080307 512 DLKNVRSKIGSTENLKHQPGGG 533
Cdd:pfam00418   9 DFSKVQSKCGSKDNIKHKPGGG 30
PHA03247 PHA03247
large tegument protein UL36; Provisional
 216-514 4.48e-07

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 53.79  E-value: 4.48e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080307  216 ESSQDSPPSQASltpgRAAPQAGSGSVCGETASVPGLPTEGSVPLPAdfFSKVSAETQASQPEGPGTGPMEEGHEAAPEF 295
Cdd:PHA03247  2586 ARRPDAPPQSAR----PRAPVDDRGDPRGPAPPSPLPPDTHAPDPPP--PSPSPAANEPDPHPPPTVPPPERPRDDPAPG 2659

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080307  296 TFHVEIKASTPKEqdlegATVVGVPGEEQKAQTQGPSVGKGTKEASLQEP---PGKQPAAGLPGRPVSRVPQlkarvask 372
Cdd:PHA03247  2660 RVSRPRRARRLGR-----AAQASSPPQRPRRRAARPTVGSLTSLADPPPPpptPEPAPHALVSATPLPPGPA-------- 2726

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080307  373 drtgndekKAKGADGKTGAKIATPRGAASPAQKGTSNATRIPAKT-TPSPKTPPGSASKQPQRKLPPAGAKSERGE---- 447
Cdd:PHA03247  2727 --------AARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTaGPPAPAPPAAPAAGPPRRLTRPAVASLSESresl 2798

                          250       260       270       280       290       300
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1907080307  448 --PPKSGERSGYSSPGSPGTPGSRSRTPSLPTPPTREPkkvaVVRTPPKSPSASKSRLQTAPVPMPDLK 514
Cdd:PHA03247  2799 psPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQP----TAPPPPPGPPPPSLPLGGSVAPGGDVR 2863
PHA03307 PHA03307
transcriptional regulator ICP4; Provisional
 329-509 7.30e-06

transcriptional regulator ICP4; Provisional


Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 49.40  E-value: 7.30e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080307  329 QGPSVGKGTKEASLQEPPGKQPAAGLPGRPVSRVPQLKARVASKDRTGNDEKKAKGADGKTGAKIATPRGAASPAQKGTS 408
Cdd:PHA03307   102 REGSPTPPGPSSPDPPPPTPPPASPPPSPAPDLSEMLRPVGSPGPPPAASPPAAGASPAAVASDAASSRQAALPLSSPEE 181

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080307  409 NATRI-PAKTTPSPKTPPGSASKQPQRKLPPAGAKSERGEP--------PKSGERSGYSSPGSPG--------TPGSRSR 471
Cdd:PHA03307   182 TARAPsSPPAEPPPSTPPAAASPRPPRRSSPISASASSPAPapgrsaadDAGASSSDSSSSESSGcgwgpeneCPLPRPA 261

                          170       180       190
                   ....*....|....*....|....*....|....*....
gi 1907080307  472 TPSLPTPPTR-EPKKVAVVRTPPKSPSASKSRLQTAPVP 509
Cdd:PHA03307   262 PITLPTRIWEaSGWNGPSSRPGPASSSSSPRERSPSPSP 300
PRK07003 PRK07003
DNA polymerase III subunit gamma/tau;
234-513 1.81e-05

DNA polymerase III subunit gamma/tau;


Pssm-ID: 235906 [Multi-domain]  Cd Length: 830  Bit Score: 48.31  E-value: 1.81e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080307 234 APQAGSGSVCGETASVPG-LPTEGSVPLPAdffskvsAETQASQPEGPGTGPMEEghEAAPeftfhveiKASTPKEQDLE 312
Cdd:PRK07003  361 AVTGGGAPGGGVPARVAGaVPAPGARAAAA-------VGASAVPAVTAVTGAAGA--ALAP--------KAAAAAAATRA 423

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080307 313 GATVVGVPGEEQKAQTQGPSVGKGTKEASLQEPPGKQPAAGLPGRPVSRVPQLKARVASKDRTGNDEKKAKGADGKTGAK 392
Cdd:PRK07003  424 EAPPAAPAPPATADRGDDAADGDAPVPAKANARASADSRCDERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAAT 503

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080307 393 IATPRGAASPAQKGTSNATRIPAKTTPSPKTPPGSASKQPQRK---------LPPAGAK--SERGEPPKSGERSGYSSPG 461
Cdd:PRK07003  504 PAAVPDARAPAAASREDAPAAAAPPAPEARPPTPAAAAPAARAggaaaaldvLRNAGMRvsSDRGARAAAAAKPAAAPAA 583

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1907080307 462 SPGTPGSRsrtPSLPTPPTREPKKVAVVRTPPKSPSASKSRLQTAPVPMPDL 513
Cdd:PRK07003  584 APKPAAPR---VAVQVPTPRARAATGDAPPNGAARAEQAAESRGAPPPWEDI 632
PHA03247 PHA03247
large tegument protein UL36; Provisional
 34-498 8.12e-05

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 46.47  E-value: 8.12e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080307   34 ESPPQP-----PADDGAEEPGSetsdAKSTPTAEDVTAPlvDERAPDKQAAAqphTEIPEGitaEEAGIGDTPNQEDQAA 108
Cdd:PHA03247  2590 DAPPQSarpraPVDDRGDPRGP----APPSPLPPDTHAP--DPPPPSPSPAA---NEPDPH---PPPTVPPPERPRDDPA 2657

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080307  109 GHVTQEPEKVEIFSQ-----SLLVEPGRREGQAPDLGTSDWTRQQVSSMSGAPLlPQGLREATCQPSGtrPEDIEKSHPA 183
Cdd:PHA03247  2658 PGRVSRPRRARRLGRaaqasSPPQRPRRRAARPTVGSLTSLADPPPPPPTPEPA-PHALVSATPLPPG--PAAARQASPA 2734

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080307  184 SELLRRGPPQKEGWGQDrlGSEEEVDEDLTVDESSQDSPPSQASLTPGRAAPQAGSGSVCGETASVPGLPTEGSVPLPAD 263
Cdd:PHA03247  2735 LPAAPAPPAVPAGPATP--GGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVL 2812

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080307  264 ffSKVSAETQASQPEGPgTGPMEEGHEAAPEFTfhveiKASTPKEQDLEGATVVGVPgeeqkAQTQGPSVGKGTKEASLQ 343
Cdd:PHA03247  2813 --APAAALPPAASPAGP-LPPPTSAQPTAPPPP-----PGPPPPSLPLGGSVAPGGD-----VRRRPPSRSPAAKPAAPA 2879

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080307  344 EPPGKQPAAGLPGRPVSRVPQlkarvaskdrtgndekkakgadgkTGAKIATPRGAASPAqkgtsnatriPAKTTPSPKT 423
Cdd:PHA03247  2880 RPPVRRLARPAVSRSTESFAL------------------------PPDQPERPPQPQAPP----------PPQPQPQPPP 2925

                          410       420       430       440       450       460       470
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1907080307  424 PPGSASKQPQRKLPPAGAKSERGEPPKSGERSGYSSPGSPGTPGSRSRTPSLPTPPTREPKKVAVVRTPPKSPSA 498
Cdd:PHA03247  2926 PPQPQPPPPPPPRPQPPLAPTTDPAGAGEPSGAVPQPWLGALVPGRVAVPRFRVPQPAPSREAPASSTPPLTGHS 3000
PHA03247 PHA03247
large tegument protein UL36; Provisional
 155-511 1.20e-04

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 45.70  E-value: 1.20e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080307  155 APLLPQGLREATCQPSGTRPEDIEKSHPASEllRRGPPQKEGWGQDRLGSEEEVDEDltvdessqDSPPSQASLtPGRAA 234
Cdd:PHA03247  2600 APVDDRGDPRGPAPPSPLPPDTHAPDPPPPS--PSPAANEPDPHPPPTVPPPERPRD--------DPAPGRVSR-PRRAR 2668

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080307  235 PQAgsgsvcgeTASVPGLPTEGsvPLPADFFSKVSAETQASQPEGPGTGPmeeghEAAPEFTfhVEIKASTPKEQDLEGA 314
Cdd:PHA03247  2669 RLG--------RAAQASSPPQR--PRRRAARPTVGSLTSLADPPPPPPTP-----EPAPHAL--VSATPLPPGPAAARQA 2731

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080307  315 TVVGVPGEEQKAQTQGPSVGKGTKEASLQEPPGKQPAAGLPGRPVSRVPQLKARVASKDRTGNDEKKAKGADGKTGAKIA 394
Cdd:PHA03247  2732 SPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAV 2811

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080307  395 TPRGAASPAQkgTSNATRIPAKTTPSPKTPP-------------------GSASKQPQRKLPPAGAKSERGEPPKSGERS 455
Cdd:PHA03247  2812 LAPAAALPPA--ASPAGPLPPPTSAQPTAPPpppgppppslplggsvapgGDVRRRPPSRSPAAKPAAPARPPVRRLARP 2889

                          330       340       350       360       370       380
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080307  456 GYSSPGS----PGTPGSRSRTPSLPTPPTREPKKVAVVRTPPKSPSASKSRLQTAPVPMP 511
Cdd:PHA03247  2890 AVSRSTEsfalPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAPTTDP 2949
PHA03307 PHA03307
transcriptional regulator ICP4; Provisional
 210-531 1.35e-04

transcriptional regulator ICP4; Provisional


Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 45.55  E-value: 1.35e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080307  210 EDLTVDESSQDSPPSQASLTPGRAAPQAGSGSvcGETASVPGLPTEGSVPLPADFFSKVSAETQASQPEGPGTGPMEEGH 289
Cdd:PHA03307    74 GPGTEAPANESRSTPTWSLSTLAPASPAREGS--PTPPGPSSPDPPPPTPPPASPPPSPAPDLSEMLRPVGSPGPPPAAS 151

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080307  290 EAAPEftfhveiKASTPKEQDLEGATVVGVPGEEQKAQTQGPSVGKGtkeaslqEPPGKQPAAGLPGRPVSRVP------ 363
Cdd:PHA03307   152 PPAAG-------ASPAAVASDAASSRQAALPLSSPEETARAPSSPPA-------EPPPSTPPAAASPRPPRRSSpisasa 217

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080307  364 ------QLKARVASKDRTGNDEKKAKGADGKTGAKIATPRGAASPAQKGTSNATRIPAKTTPSPKTPPGSASKQPQRKLP 437
Cdd:PHA03307   218 sspapaPGRSAADDAGASSSDSSSSESSGCGWGPENECPLPRPAPITLPTRIWEASGWNGPSSRPGPASSSSSPRERSPS 297

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080307  438 PAGAKSERGE----PPKSGERSGY----------SSPGSPGTPGSRSRTPSLPTPPTREPKKVAVVRTPPKSPSASKSRL 503
Cdd:PHA03307   298 PSPSSPGSGPapssPRASSSSSSSressssstssSSESSRGAAVSPGPSPSRSPSPSRPPPPADPSSPRKRPRPSRAPSS 377

                          330       340
                   ....*....|....*....|....*...
gi 1907080307  504 QTAPVPMPDLKNVRSKIGSTENLKHQPG 531
Cdd:PHA03307   378 PAASAGRPTRRRARAAVAGRARRRDATG 405
PRK12323 PRK12323
DNA polymerase III subunit gamma/tau;
314-506 2.11e-04

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237057 [Multi-domain]  Cd Length: 700  Bit Score: 44.48  E-value: 2.11e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080307 314 ATVVGVPGEEQKAQTQGPSVGKGTkEASLQEPPGKQPAAGLPGRPVSRVPQLK--ARVASKDRTGNDEKKAKGADGKTGA 391
Cdd:PRK12323  375 ATAAAAPVAQPAPAAAAPAAAAPA-PAAPPAAPAAAPAAAAAARAVAAAPARRspAPEALAAARQASARGPGGAPAPAPA 453

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080307 392 KIATP----RGAASPAQKGTSNATRIPAKTTPSPKTPPGSASKQPQRKLPPAGAKSERGEP---PKSGERSGYSSPG-SP 463
Cdd:PRK12323  454 PAAAPaaaaRPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPAQPdaaPAGWVAESIPDPAtAD 533

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|...
gi 1907080307 464 GTPGSRSRTPSLPTPPTREPKKVAVVRTPPKSPSASKSRLQTA 506
Cdd:PRK12323  534 PDDAFETLAPAPAAAPAPRAAAATEPVVAPRPPRASASGLPDM 576
PRK14971 PRK14971
DNA polymerase III subunit gamma/tau;
386-520 2.18e-04

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237874 [Multi-domain]  Cd Length: 614  Bit Score: 44.38  E-value: 2.18e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080307 386 DGKTGAKIATPRGAASPAQKGTSNATRIPAKTTPSPKtpPGSASKQPQRKLPPAgAKSERGEPPKSGERSGYSSPGSPGT 465
Cdd:PRK14971  365 KGDDASGGRGPKQHIKPVFTQPAAAPQPSAAAAASPS--PSQSSAAAQPSAPQS-ATQPAGTPPTVSVDPPAAVPVNPPS 441

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1907080307 466 PGSRSRTPslptPPTREPKKVAVVRTPPKSPSASKSRLQTAPVPMPDLKNVRSKI 520
Cdd:PRK14971  442 TAPQAVRP----AQFKEEKKIPVSKVSSLGPSTLRPIQEKAEQATGNIKEAPTGT 492
PRK12323 PRK12323
DNA polymerase III subunit gamma/tau;
394-511 3.31e-04

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237057 [Multi-domain]  Cd Length: 700  Bit Score: 44.10  E-value: 3.31e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080307 394 ATPRGAASPAQKGTSNATRIPAKTTPSPKTPPGSASKQPQRKLPPAGAKSERGEPPKSGERSGYSSPGSPGTPGSRSRTP 473
Cdd:PRK12323  372 AGPATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPA 451

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|
gi 1907080307 474 SLP--TPPTREPKKVAVVRTPPKSPSASKSRLQTAPVPMP 511
Cdd:PRK12323  452 PAPaaAPAAAARPAAAGPRPVAAAAAAAPARAAPAAAPAP 491
PHA03307 PHA03307
transcriptional regulator ICP4; Provisional
 331-498 5.54e-04

transcriptional regulator ICP4; Provisional


Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 43.62  E-value: 5.54e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080307  331 PSVGKGTKEASLQEPPGKQPAAGLPGRPVSRVPQLKARVASKDRTGNDEKKAKGADGKTGAKIATPRGAASPAQKGTSNa 410
Cdd:PHA03307   761 PSLVPAKLAEALALLEPAEPQRGAGSSPPVRAEAAFRRPGRLRRSGPAADAASRTASKRKSRSHTPDGGSESSGPARPP- 839

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080307  411 triPAKTTPSPKTPPGSASKQPQRKLPPAGAKSERgEPPKSGERSGYSSPGSPGTPGSRSRTPSLPTPPTREPKKVAVVR 490
Cdd:PHA03307   840 ---GAAARPPPARSSESSKSKPAAAGGRARGKNGR-RRPRPPEPRARPGAAAPPKAAAAAPPAGAPAPRPRPAPRVKLGP 915


                   ....*...
gi 1907080307  491 TPPKSPSA 498
Cdd:PHA03307   916 MPPGGPDP 923
PHA03378 PHA03378
EBNA-3B; Provisional
 395-511 8.57e-04

EBNA-3B; Provisional


Pssm-ID: 223065 [Multi-domain]  Cd Length: 991  Bit Score: 42.75  E-value: 8.57e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080307 395 TPRGAASPAQKGTSNATRIPAKTTPSPKTPPGSASKQPQR------KLPPAGAKSERGEPPKSGERSGYSSPGSPGTPGS 468
Cdd:PHA03378  677 SPTGANTMLPIQWAPGTMQPPPRAPTPMRPPAAPPGRAQRpaaatgRARPPAAAPGRARPPAAAPGRARPPAAAPGRARP 756

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|...
gi 1907080307 469 RSRTPSLPTPPTREPKKvAVVRTPPKSPSASKSRLQTAPVPMP 511
Cdd:PHA03378  757 PAAAPGRARPPAAAPGA-PTPQPPPQAPPAPQQRPRGAPTPQP 798
PHA03247 PHA03247
large tegument protein UL36; Provisional
 222-522 9.32e-04

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 43.00  E-value: 9.32e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080307  222 PPSQASLTPGRAAPQAGSGSVCGETAS-VPGLPTEGSV----PLPADFFSKVSAETQASQPEGPGTGPMEEGheAAPEFT 296
Cdd:PHA03247  2712 PHALVSATPLPPGPAAARQASPALPAApAPPAVPAGPAtpggPARPARPPTTAGPPAPAPPAAPAAGPPRRL--TRPAVA 2789

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080307  297 FHVEIKASTPKEQDLEGATVVGVPGEEQKAQTQGPSVGKGTKEASLQEPPGKQPAaglpgrPVSRVPQLKARVASkdrtG 376
Cdd:PHA03247  2790 SLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPG------PPPPSLPLGGSVAP----G 2859

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080307  377 NDEKKAkgadGKTGAKIATPrgAASPAQKGTSNATRIPAKTTPSPKTPPGSASKQPQRKLPPAGAKSERGEPPKSGE--- 453
Cdd:PHA03247  2860 GDVRRR----PPSRSPAAKP--AAPARPPVRRLARPAVSRSTESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQppp 2933

                          250       260       270       280       290       300       310
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1907080307  454 ----RSGYSSPGSPGTPGSRSRTPSLPTPPTRE--PKKVAVVRTppKSPSASKSRLQTAPVPMPDLKNVRSKIGS 522
Cdd:PHA03247  2934 ppppRPQPPLAPTTDPAGAGEPSGAVPQPWLGAlvPGRVAVPRF--RVPQPAPSREAPASSTPPLTGHSLSRVSS 3006
PRK14950 PRK14950
DNA polymerase III subunits gamma and tau; Provisional
 395-520 1.04e-03

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237864 [Multi-domain]  Cd Length: 585  Bit Score: 42.10  E-value: 1.04e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080307 395 TPRGAASPAQkgTSNATRIPAKTTPSPKTPPGSASKQPQrklPPAGAKSERGEPPKSGERsgyssPGSPGTPGSRSRTPs 474
Cdd:PRK14950  361 VPVPAPQPAK--PTAAAPSPVRPTPAPSTRPKAAAAANI---PPKEPVRETATPPPVPPR-----PVAPPVPHTPESAP- 429

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*.
gi 1907080307 475 lPTPPTREPKKVAVVRTPPKSPSASKSRLQTAPVPMPDLKNVRSKI 520
Cdd:PRK14950  430 -KLTRAAIPVDEKPKYTPPAPPKEEEKALIADGDVLEQLEAIWKQI 474
PHA03247 PHA03247
large tegument protein UL36; Provisional
 253-503 1.58e-03

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 42.23  E-value: 1.58e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080307  253 PTEGSVPLPADFFSKVSAETQASQPEGPGTGPMEEGHEAAPEftfhveikASTPKEQDLEGATVVGVPGEEQKAQTQGPS 332
Cdd:PHA03247   247 PLRGDIAAPAPPPVVGEGADRAPETARGATGPPPPPEAAAPN--------GAAAPPDGVWGAALAGAPLALPAPPDPPPP 318

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080307  333 VGKGTKEASLQEPPGKQPAAGLP--------GRPVSRVPQLKARVASKDRTGNdEKKAKGADGKTGAKIATPRgAASPAQ 404
Cdd:PHA03247   319 APAGDAEEEDDEDGAMEVVSPLPrprqhyplGFPKRRRPTWTPPSSLEDLSAG-RHHPKRASLPTRKRRSARH-AATPFA 396

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080307  405 KGTSnatripAKTTPSPKTPPGSASKQPQRKLPPAGAKSERGEPPKSGERSGYSSPGSP--GTPGSRSRTPSLPTPPTRE 482
Cdd:PHA03247   397 RGPG------GDDQTRPAAPVPASVPTPAPTPVPASAPPPPATPLPSAEPGSDDGPAPPpeRQPPAPATEPAPDDPDDAT 470

                          250       260
                   ....*....|....*....|...
gi 1907080307  483 PKKVAVVRT--PPKSPSASKSRL 503
Cdd:PHA03247   471 RKALDALRErrPPEPPGADLAEL 493
PRK13108 PRK13108
prolipoprotein diacylglyceryl transferase; Reviewed
 41-205 2.19e-03

prolipoprotein diacylglyceryl transferase; Reviewed


Pssm-ID: 237284 [Multi-domain]  Cd Length: 460  Bit Score: 41.12  E-value: 2.19e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080307  41 ADDGAEEPGSETSDAKSTPTAEDVTAPlVDERAPDK-----QAAAQPHTEIPEGITAEEAGIGDTPNQEDQAAGHVTQEP 115
Cdd:PRK13108  291 VVDEALEREPAELAAAAVASAASAVGP-VGPGEPNQpddvaEAVKAEVAEVTDEVAAESVVQVADRDGESTPAVEETSEA 369

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080307 116 EKVEifsqsllVEPGRREGQAPDLGTSDWTRQqvssmSGAPLLPQGlrEATCQPSGTRPEDIEKSHPASELLRRGPPQKE 195
Cdd:PRK13108  370 DIER-------EQPGDLAGQAPAAHQVDAEAA-----SAAPEEPAA--LASEAHDETEPEVPEKAAPIPDPAKPDELAVA 435

                         170
                  ....*....|
gi 1907080307 196 GWGQDRLGSE 205
Cdd:PRK13108  436 GPGDDPAEPD 445
PHA03307 PHA03307
transcriptional regulator ICP4; Provisional
 112-512 2.56e-03

transcriptional regulator ICP4; Provisional


Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 41.31  E-value: 2.56e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080307  112 TQEPEKVEIFSQSLLVEPGRREGQAPDLGTSDWTRQQVSSMSGAPLLPQGLREAtcqPSGTRPEDIEKSHP--ASELLRR 189
Cdd:PHA03307    64 RFEPPTGPPPGPGTEAPANESRSTPTWSLSTLAPASPAREGSPTPPGPSSPDPP---PPTPPPASPPPSPApdLSEMLRP 140

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080307  190 GPPQKEGWGQDRLGSEEEVDED-------------LTVDESSQDSPPSQASLTPGRAAPQAGSGSvCGETASVPGLPTEG 256
Cdd:PHA03307   141 VGSPGPPPAASPPAAGASPAAVasdaassrqaalpLSSPEETARAPSSPPAEPPPSTPPAAASPR-PPRRSSPISASASS 219

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080307  257 SVPLPADF--FSKVSAETQASQPEGPGTGPMEEGHEAAPeftfhveikasTPKEQDLEGATVVGVPGEeqkaqtqGPSVG 334
Cdd:PHA03307   220 PAPAPGRSaaDDAGASSSDSSSSESSGCGWGPENECPLP-----------RPAPITLPTRIWEASGWN-------GPSSR 281

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080307  335 KGTKEASlqepPGKQPAAGLPGRPVSRVPqlkARVASKDRTGNDEKKAKGADGKTGAKIATPRGAASPAQKGTSNAtrip 414
Cdd:PHA03307   282 PGPASSS----SSPRERSPSPSPSSPGSG---PAPSSPRASSSSSSSRESSSSSTSSSSESSRGAAVSPGPSPSRS---- 350

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080307  415 akttPSPKTPPGSASKQPQRKLPPAGAKSERGEPPKSGERSGYSSPGSPGTPGSRSRTPSLPTPPTRepkkvavvRTPPK 494
Cdd:PHA03307   351 ----PSPSRPPPPADPSSPRKRPRPSRAPSSPAASAGRPTRRRARAAVAGRARRRDATGRFPAGRPR--------PSPLD 418

                          410
                   ....*....|....*...
gi 1907080307  495 SPSASKSRLQTAPVPMPD 512
Cdd:PHA03307   419 AGAASGAFYARYPLLTPS 436
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 13-488 2.70e-03

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 41.12  E-value: 2.70e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080307  13 DHAGDYTLLQDQEGDMDHGLKESPPQPPADDGAEEPGSETSDAKSTPTAedvtAPLVDERAPDKQAAAQPHTEIPEGITA 92
Cdd:PRK07764  370 DERGLLARLERLERRLGVAGGAGAPAAAAPSAAAAAPAAAPAPAAAAPA----AAAAPAPAAAPQPAPAPAPAPAPPSPA 445

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080307  93 EEAGIGDTPNQEDQAAGHVTQEPEKVEIFSQSLLVEPGRREGQAPDLGTSdwtRQQVSSMSGAPLLPQGLREATCQPSGT 172
Cdd:PRK07764  446 GNAPAGGAPSPPPAAAPSAQPAPAPAAAPEPTAAPAPAPPAAPAPAAAPA---APAAPAAPAGADDAATLRERWPEILAA 522

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080307 173 RPEDIEKSHPAseLLRRGPPQkegwgqdrlgseeEVDED-LTVdesSQDSPPSQASLTPG------RAAPQAGSGSVCGE 245
Cdd:PRK07764  523 VPKRSRKTWAI--LLPEATVL-------------GVRGDtLVL---GFSTGGLARRFASPgnaevlVTALAEELGGDWQV 584

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080307 246 TASVPGLPTEGSVPLPADFFSKVSAETQASQPEGPGTGPMEEGHEAAPeftfhveikASTPKEQDLEGATVVGVPGEEQK 325
Cdd:PRK07764  585 EAVVGPAPGAAGGEGPPAPASSGPPEEAARPAAPAAPAAPAAPAPAGA---------AAAPAEASAAPAPGVAAPEHHPK 655

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080307 326 AQTQGPSVGKGTKEASL--QEPPGKQPAAGLPGRPVSRVPQLKARVASKDRTgndekkAKGADGKTGAKIATPRGAASPA 403
Cdd:PRK07764  656 HVAVPDASDGGDGWPAKagGAAPAAPPPAPAPAAPAAPAGAAPAQPAPAPAA------TPPAGQADDPAAQPPQAAQGAS 729

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080307 404 QKGTSNATRIPAKTTPSPKTPPGSASKQPQRKLPPAGAKSERGEPPksgersgySSPGSPGTPGSRSRTPSLPTPPTREP 483
Cdd:PRK07764  730 APSPAADDPVPLPPEPDDPPDPAGAPAQPPPPPAPAPAAAPAAAPP--------PSPPSEEEEMAEDDAPSMDDEDRRDA 801


                  ....*
gi 1907080307 484 KKVAV 488
Cdd:PRK07764  802 EEVAM 806
PTZ00449 PTZ00449
104 kDa microneme/rhoptry antigen; Provisional
 277-530 3.51e-03

104 kDa microneme/rhoptry antigen; Provisional


Pssm-ID: 185628 [Multi-domain]  Cd Length: 943  Bit Score: 40.83  E-value: 3.51e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080307 277 PEGPGTG---PMEEGHEAAPEFTFHVEIKASTPKEQDLEGATVVGV------PGEEQKAQ-----TQGPSVGKGTKEASL 342
Cdd:PTZ00449  511 PEGPEASglpPKAPGDKEGEEGEHEDSKESDEPKEGGKPGETKEGEvgkkpgPAKEHKPSkiptlSKKPEFPKDPKHPKD 590

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080307 343 QEPPGKQPAAGLPGRPVSRvPQLKARVASKDrtgndEKKAKGADGKTGAKiaTPRGAASPAQKGTSNATRIPaKTTPSPK 422
Cdd:PTZ00449  591 PEEPKKPKRPRSAQRPTRP-KSPKLPELLDI-----PKSPKRPESPKSPK--RPPPPQRPSSPERPEGPKII-KSPKPPK 661

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080307 423 TPPGSASKQPQRKL----PPAGAKSERGEPPKSGERSGYS--------SPGSPGT-----PGSRSRTPSLPTPPTREPKK 485
Cdd:PTZ00449  662 SPKPPFDPKFKEKFyddyLDAAAKSKETKTTVVLDESFESilketlpeTPGTPFTtprplPPKLPRDEEFPFEPIGDPDA 741

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1907080307 486 VAVVRTPPKSPSASKS-RLQTAP--VPMPDL-------KNVRSKIGSTENLKHQP 530
Cdd:PTZ00449  742 EQPDDIEFFTPPEEERtFFHETPadTPLPDIlaeefkeEDIHAETGEPDEAMKRP 796
PTZ00449 PTZ00449
104 kDa microneme/rhoptry antigen; Provisional
 344-500 3.66e-03

104 kDa microneme/rhoptry antigen; Provisional


Pssm-ID: 185628 [Multi-domain]  Cd Length: 943  Bit Score: 40.83  E-value: 3.66e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080307 344 EPPGKQPAAGLPGR-PVSRVPQLKARVASKdrtGNDEKKAKGADGKTGAKIATPRgaASPAQKGTSNATRIPAKTTPSPK 422
Cdd:PTZ00449  509 EPPEGPEASGLPPKaPGDKEGEEGEHEDSK---ESDEPKEGGKPGETKEGEVGKK--PGPAKEHKPSKIPTLSKKPEFPK 583

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080307 423 TPpgsasKQPQRKLPPAGAKS----ERGEPPKSGERSGYSS-PGSPGTPGSrSRTPSLPTPPTR--EPKKVAVVRTP--P 493
Cdd:PTZ00449  584 DP-----KHPKDPEEPKKPKRprsaQRPTRPKSPKLPELLDiPKSPKRPES-PKSPKRPPPPQRpsSPERPEGPKIIksP 657


                  ....*..
gi 1907080307 494 KSPSASK 500
Cdd:PTZ00449  658 KPPKSPK 664
PHA03247 PHA03247
large tegument protein UL36; Provisional
 222-511 3.87e-03

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 40.69  E-value: 3.87e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080307  222 PPSQASLTPGRAAPQAGSGSVCGETASVPGLPTEgsvPLPADFFSKVSAETQASQPEGPGTGPMEEGHEAAPeftfhvei 301
Cdd:PHA03247  2689 RPTVGSLTSLADPPPPPPTPEPAPHALVSATPLP---PGPAAARQASPALPAAPAPPAVPAGPATPGGPARP-------- 2757

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080307  302 kASTPKEQDLEGATVVGVP-GEEQKAQTQGPSVGKGTKEASLQEPPGKQPAAGLPGRPVSRVPQLKARVASKDRTGNDEK 380
Cdd:PHA03247  2758 -ARPPTTAGPPAPAPPAAPaAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQP 2836

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080307  381 KAKGADGKTGAKIATPRGAASPAQKGTSNATRIPAKTTP-SPKTPPGSASKQPQRKLPPagakSERGEPPKSGERSGYSS 459
Cdd:PHA03247  2837 TAPPPPPGPPPPSLPLGGSVAPGGDVRRRPPSRSPAAKPaAPARPPVRRLARPAVSRST----ESFALPPDQPERPPQPQ 2912

                          250       260       270       280       290
                   ....*....|....*....|....*....|....*....|....*....|..
gi 1907080307  460 PGSPGTPGSRSRTPSLPTPPTrepkkvavvRTPPKSPSASKSRLQTAPVPMP 511
Cdd:PHA03247  2913 APPPPQPQPQPPPPPQPQPPP---------PPPPRPQPPLAPTTDPAGAGEP 2955
PHA03247 PHA03247
large tegument protein UL36; Provisional
 311-530 5.61e-03

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 40.31  E-value: 5.61e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080307  311 LEGATVVGVPGEEQKAQTQGPSV--------GKGTKEASLQEPPGKQPAAGLPGRPVSRV--PQLKA------RVASKDR 374
Cdd:PHA03247  2469 LLGELFPGAPVYRRPAEARFPFAagaapdpgGGGPPDPDAPPAPSRLAPAILPDEPVGEPvhPRMLTwirgleELASDDA 2548

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080307  375 TGNDEKKAKGA-DGKTGAKIATPRGAASPAQKG-TSNATRIPAKTTPSPKTPPGSASKQPQRKLPPAGA--KSERGEPPK 450
Cdd:PHA03247  2549 GDPPPPLPPAApPAAPDRSVPPPRPAPRPSEPAvTSRARRPDAPPQSARPRAPVDDRGDPRGPAPPSPLppDTHAPDPPP 2628

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080307  451 SGERSGYSSPGSPGTpgsrsrTPSLPTPPTREPKKVAVVRTPPKSPSASKSRLQTAPVPMPDLKNVRSKIGSTENLKHQP 530
Cdd:PHA03247  2629 PSPSPAANEPDPHPP------PTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVGSLTSLADPP 2702
PHA03307 PHA03307
transcriptional regulator ICP4; Provisional
 126-512 7.86e-03

transcriptional regulator ICP4; Provisional


Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 39.77  E-value: 7.86e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080307  126 LVEPGRREGQAPDLGTSDWTRQQVSSMSGAPllPQGLREATCQPSGTRPEDIEKSHPASELLRRGPPQKEGWGQDRLGSE 205
Cdd:PHA03307    50 LAAVTVVAGAAACDRFEPPTGPPPGPGTEAP--ANESRSTPTWSLSTLAPASPAREGSPTPPGPSSPDPPPPTPPPASPP 127

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080307  206 EEVDEDLtvdessQDSPPSQASLTPGRAAPQAGSGSVCGETASVPGLPTEGSVPLPADffsKVSAETQASQPEGPGTGPM 285
Cdd:PHA03307   128 PSPAPDL------SEMLRPVGSPGPPPAASPPAAGASPAAVASDAASSRQAALPLSSP---EETARAPSSPPAEPPPSTP 198

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080307  286 EEGHEAAPEFTfHVEIKASTPKEQDLEGATvvGVPGEEQKAQTQGPSVGKGTKEASLQEPPGKQPAAG-LPGRPVSRVPQ 364
Cdd:PHA03307   199 PAAASPRPPRR-SSPISASASSPAPAPGRS--AADDAGASSSDSSSSESSGCGWGPENECPLPRPAPItLPTRIWEASGW 275

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907080307  365 LKARV---ASKDRTGNDEKKAKGADGKTGAKIATPRGAASPAQKGTSNATriPAKTTPSPKTPPGSASkqpqrklPPAGA 441
Cdd:PHA03307   276 NGPSSrpgPASSSSSPRERSPSPSPSSPGSGPAPSSPRASSSSSSSRESS--SSSTSSSSESSRGAAV-------SPGPS 346

                          330       340       350       360       370       380       390
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1907080307  442 KSERGEPPKSGERSGYSSPGSPGTPGSRSRTPSlPTPPTREPKKVAVVRTPPKSPSASKSRL---QTAPVPMPD 512
Cdd:PHA03307   347 PSRSPSPSRPPPPADPSSPRKRPRPSRAPSSPA-ASAGRPTRRRARAAVAGRARRRDATGRFpagRPRPSPLDA 419
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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